BLASTX 7.6.2
Query= UN10088 /QuerySize=983
(982 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G06530.1 | Symbols: VPS2.1 | VPS2.1 | chr2:258... 422 2e-118
TAIR9_protein||AT1G03950.1 | Symbols: VPS2.3 | VPS2.3 (VACUOLAR ... 178 6e-045
TAIR9_protein||AT5G44560.1 | Symbols: VPS2.2 | VPS2.2 | chr5:179... 173 3e-043
TAIR9_protein||AT5G44560.2 | Symbols: VPS2.2 | VPS2.2 | chr5:179... 156 2e-038
TAIR9_protein||AT5G22950.1 | Symbols: VPS24.1 | VPS24.1 | chr5:7... 105 5e-023
>TAIR9_protein||AT2G06530.1 | Symbols: VPS2.1 | VPS2.1 | chr2:2588740-2590285
REVERSE
Length = 226
Score = 422 bits (1083), Expect = 2e-118
Identities = 220/226 (97%), Positives = 221/226 (97%)
Frame = +1
Query: 151 MMNSIFGKRKTPAELLRENKRMLDKSIRDIERERQGLQTQEKKLITEIKKTAKQGQMGAV 330
MMNSIFGKRKTPAELLRENKRMLDKSIR+IERERQGLQTQEKKLI EIKKTAKQGQMGAV
Sbjct: 1 MMNSIFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLINEIKKTAKQGQMGAV 60
Query: 331 KVMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNL 510
KVMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNL
Sbjct: 61 KVMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNL 120
Query: 511 PSLQKIMQEFERQNEKMEMVSEVMGDAIDDALEGDEEEEETEDLVSQVLDEIGIDINQEL 690
PSLQKIMQEFERQNEKMEMVSEVMGDAIDDALEGDEEEEETEDLVSQVLDEIGIDINQEL
Sbjct: 121 PSLQKIMQEFERQNEKMEMVSEVMGDAIDDALEGDEEEEETEDLVSQVLDEIGIDINQEL 180
Query: 691 VNAPSGAVAAPAAKNKVVQAEAAGAEDGGGIDSDLQARLDNLRKM* 828
VNAPSGAVA PAAKNKVVQAEA GAED GGIDSDLQARLDNLRKM*
Sbjct: 181 VNAPSGAVAVPAAKNKVVQAEATGAEDSGGIDSDLQARLDNLRKM* 226
>TAIR9_protein||AT1G03950.1 | Symbols: VPS2.3 | VPS2.3 (VACUOLAR PROTEIN
SORTING-ASSOCIATED PROTEIN 2.3) | chr1:1011388-1013212 REVERSE
Length = 211
Score = 178 bits (450), Expect = 6e-045
Identities = 86/192 (44%), Positives = 133/192 (69%)
Frame = +1
Query: 160 SIFGKRKTPAELLRENKRMLDKSIRDIERERQGLQTQEKKLITEIKKTAKQGQMGAVKVM 339
+IF K+ P E+LRE+KR + ++ R IE+E LQ++EKKL+ EIK+TAK G GA K++
Sbjct: 2 NIFTKKPNPREVLRESKREMTQATRGIEKEIGSLQSEEKKLVLEIKRTAKSGNEGATKIL 61
Query: 340 AKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSL 519
A+ LIR R QI ++Q++G++ Q + + ++ M+G TKAM M++ M+
Sbjct: 62 ARQLIRLRQQIANLQGSRAQMRGIATHTQAMHAHTSVAAGMQGATKAMAAMSKNMDPAKQ 121
Query: 520 QKIMQEFERQNEKMEMVSEVMGDAIDDALEGDEEEEETEDLVSQVLDEIGIDINQELVNA 699
K+M+EF++Q+ +M+M +E+M D+IDDAL+ DE E+ETEDL +QVLDEIGIDI +L +A
Sbjct: 122 AKVMREFQKQSAQMDMTTEMMSDSIDDALDNDEAEDETEDLTNQVLDEIGIDIASQLSSA 181
Query: 700 PSGAVAAPAAKN 735
P G + A++
Sbjct: 182 PKGKIGGKKAED 193
>TAIR9_protein||AT5G44560.1 | Symbols: VPS2.2 | VPS2.2 | chr5:17946081-17948222
FORWARD
Length = 223
Score = 173 bits (436), Expect = 3e-043
Identities = 90/222 (40%), Positives = 140/222 (63%), Gaps = 1/222 (0%)
Frame = +1
Query: 160 SIFGKRKTPAELLRENKRMLDKSIRDIERERQGLQTQEKKLITEIKKTAKQGQMGAVKVM 339
+IF K+ TP + LR +KR + + R IERE LQ +EK+L+ EIKKTAK G A K++
Sbjct: 2 NIFKKKTTPKDALRTSKREMAVATRGIEREITSLQLEEKRLVAEIKKTAKTGNEAATKIL 61
Query: 340 AKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSL 519
A+ L+R R QI ++Q++GV+ Q L ++ ++ MKG TKAM MN+QM
Sbjct: 62 ARQLVRLRQQITNLQGSRAQIRGVTTHTQALYASTSISSGMKGATKAMVAMNKQMAPTKQ 121
Query: 520 QKIMQEFERQNEKMEMVSEVMGDAIDDALEGDEEEEETEDLVSQVLDEIGIDINQELVNA 699
K++++F++Q+ +++M E+M +AID+ L+ DE EEETEDL +QVLDEIG+ + +L +A
Sbjct: 122 AKVIKDFQKQSAQLDMTIEMMSEAIDETLDKDEAEEETEDLTNQVLDEIGVGVASQLSSA 181
Query: 700 PSGAVAAPAAKNKVVQAEAAGAEDGGGIDSDLQARLDNLRKM 825
P G +A A A + +D +L+ RL +LR++
Sbjct: 182 PKGRIATKTAAPPASTAATNKNSESSEVD-ELEKRLASLRRI 222
>TAIR9_protein||AT5G44560.2 | Symbols: VPS2.2 | VPS2.2 | chr5:17946516-17948222
FORWARD
Length = 203
Score = 156 bits (394), Expect = 2e-038
Identities = 81/198 (40%), Positives = 125/198 (63%), Gaps = 1/198 (0%)
Frame = +1
Query: 232 RDIERERQGLQTQEKKLITEIKKTAKQGQMGAVKVMAKDLIRTRHQIEKFYKLKSQLQGV 411
R IERE LQ +EK+L+ EIKKTAK G A K++A+ L+R R QI ++Q++GV
Sbjct: 6 RGIEREITSLQLEEKRLVAEIKKTAKTGNEAATKILARQLVRLRQQITNLQGSRAQIRGV 65
Query: 412 SLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMEMVSEVMGDA 591
+ Q L ++ ++ MKG TKAM MN+QM K++++F++Q+ +++M E+M +A
Sbjct: 66 TTHTQALYASTSISSGMKGATKAMVAMNKQMAPTKQAKVIKDFQKQSAQLDMTIEMMSEA 125
Query: 592 IDDALEGDEEEEETEDLVSQVLDEIGIDINQELVNAPSGAVAAPAAKNKVVQAEAAGAED 771
ID+ L+ DE EEETEDL +QVLDEIG+ + +L +AP G +A A A +
Sbjct: 126 IDETLDKDEAEEETEDLTNQVLDEIGVGVASQLSSAPKGRIATKTAAPPASTAATNKNSE 185
Query: 772 GGGIDSDLQARLDNLRKM 825
+D +L+ RL +LR++
Sbjct: 186 SSEVD-ELEKRLASLRRI 202
>TAIR9_protein||AT5G22950.1 | Symbols: VPS24.1 | VPS24.1 | chr5:7681380-7682720
FORWARD
Length = 230
Score = 105 bits (261), Expect = 5e-023
Identities = 66/227 (29%), Positives = 124/227 (54%), Gaps = 11/227 (4%)
Frame = +1
Query: 160 SIFGKRKTPAELLRENKRMLDKSIRDIERERQGLQTQEKKLITEIKKTAKQGQMGAVKVM 339
+I + P +LLR+ +R L + R+IER+ + +Q +E+ + IK+ AK+ M + K +
Sbjct: 6 NIIKPKPDPKQLLRDWQRKLRQECRNIERQIRDIQKEERNVQKAIKEAAKRNDMVSAKAL 65
Query: 340 AKDLIRTRHQIEKFYKLKSQLQGVSLRI-QTLKSTQAMGEAMKGVTKAMGQMNRQMNLPS 516
AK+++ +R + + Y+ K+Q+ +S+ + +++ + +G K + M +N M P
Sbjct: 66 AKEIVSSRRTVNRLYENKAQMNSISMHLGESVAIARTVGHLSKS-AEVMKLVNNLMKAPQ 124
Query: 517 LQKIMQEFERQNEKMEMVSEVMGDAIDDALEGDEEEEETEDLVSQVLDEIGIDINQEL-V 693
+ MQEF ++ K ++ E + +AID+AL+ ++ EEE ++ V +VL I + EL V
Sbjct: 125 MAATMQEFSKEMTKAGVIEEFVNEAIDNALDSEDMEEEIDEEVDKVLTAIAGETAAELPV 184
Query: 694 NAPSGAVAAPAAKNKVVQAEAAGAEDGGGID-----SDLQARLDNLR 819
+ PA K + E A AE G+D +++ARL +R
Sbjct: 185 AVRKERIKVPAQKASTSREEEAVAE---GVDDEEELEEIRARLAKVR 228
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,616,215,784
Number of Sequences: 33410
Number of Extensions: 5616215784
Number of Successful Extensions: 210627147
Number of sequences better than 0.0: 0
|
