BLASTX 7.6.2
Query= UN10102 /QuerySize=906
(905 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|34146846|gb|AAQ62431.1| At3g01410 [Arabidopsis thaliana] 190 5e-046
gi|30678332|ref|NP_186790.2| RNase H domain-containing protein [... 190 5e-046
gi|6692261|gb|AAF24611.1|AC010870_4 putative RNase H [Arabidopsi... 190 5e-046
gi|255588182|ref|XP_002534525.1| nuclease, putative [Ricinus com... 166 5e-039
gi|224102015|ref|XP_002312512.1| predicted protein [Populus tric... 165 1e-038
gi|326488477|dbj|BAJ93907.1| predicted protein [Hordeum vulgare ... 164 2e-038
gi|326499834|dbj|BAJ90752.1| predicted protein [Hordeum vulgare ... 164 2e-038
gi|326505852|dbj|BAJ91165.1| predicted protein [Hordeum vulgare ... 164 2e-038
gi|224108115|ref|XP_002314727.1| predicted protein [Populus tric... 163 5e-038
gi|38636806|dbj|BAD03047.1| putative RNase H domain-containing p... 161 2e-037
gi|225452547|ref|XP_002280233.1| PREDICTED: hypothetical protein... 160 4e-037
gi|296087711|emb|CBI34967.3| unnamed protein product [Vitis vini... 160 4e-037
gi|194700066|gb|ACF84117.1| unknown [Zea mays] 159 7e-037
gi|226495263|ref|NP_001141955.1| hypothetical protein LOC1002741... 159 7e-037
gi|195627916|gb|ACG35788.1| retrotransposon protein Ty3-gypsy su... 159 7e-037
gi|255552696|ref|XP_002517391.1| nuclease, putative [Ricinus com... 159 7e-037
gi|224077608|ref|XP_002305325.1| predicted protein [Populus tric... 158 2e-036
gi|242081781|ref|XP_002445659.1| hypothetical protein SORBIDRAFT... 158 2e-036
gi|334182806|ref|NP_173819.2| RNase H domain-containing protein ... 156 6e-036
gi|242089145|ref|XP_002440405.1| hypothetical protein SORBIDRAFT... 155 1e-035
>gi|34146846|gb|AAQ62431.1| At3g01410 [Arabidopsis thaliana]
Length = 294
Score = 190 bits (480), Expect = 5e-046
Identities = 96/142 (67%), Positives = 114/142 (80%), Gaps = 1/142 (0%)
Frame = +1
Query: 208 ACTIEFDGACRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGIATNNVAEYRALILGLEYAL 387
+CTIEFDGA +GNPGKAGAGAVLR++ DN VLFYLR+G+G ATNNVAEYRAL+LGL AL
Sbjct: 154 SCTIEFDGASKGNPGKAGAGAVLRAS-DNSVLFYLREGVGNATNNVAEYRALLLGLRSAL 212
Query: 388 DKGFRNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDLMSRFNSCRIQHIGREFNSE 567
DKGF+NV + GDS+LVC QV W+ NHPK+AEL + AK+LM+ F + I+HI RE NSE
Sbjct: 213 DKGFKNVHVLGDSMLVCMQVQGAWKTNHPKMAELCKQAKELMNSFKTFDIKHIAREKNSE 272
Query: 568 ADAQANRAVNLADGQIQCESRG 633
AD QAN A+ LADGQ Q S G
Sbjct: 273 ADKQANSAIFLADGQTQVISGG 294
>gi|30678332|ref|NP_186790.2| RNase H domain-containing protein [Arabidopsis
thaliana]
Length = 294
Score = 190 bits (480), Expect = 5e-046
Identities = 96/142 (67%), Positives = 114/142 (80%), Gaps = 1/142 (0%)
Frame = +1
Query: 208 ACTIEFDGACRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGIATNNVAEYRALILGLEYAL 387
+CTIEFDGA +GNPGKAGAGAVLR++ DN VLFYLR+G+G ATNNVAEYRAL+LGL AL
Sbjct: 154 SCTIEFDGASKGNPGKAGAGAVLRAS-DNSVLFYLREGVGNATNNVAEYRALLLGLRSAL 212
Query: 388 DKGFRNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDLMSRFNSCRIQHIGREFNSE 567
DKGF+NV + GDS+LVC QV W+ NHPK+AEL + AK+LM+ F + I+HI RE NSE
Sbjct: 213 DKGFKNVHVLGDSMLVCMQVQGAWKTNHPKMAELCKQAKELMNSFKTFDIKHIAREKNSE 272
Query: 568 ADAQANRAVNLADGQIQCESRG 633
AD QAN A+ LADGQ Q S G
Sbjct: 273 ADKQANSAIFLADGQTQVISGG 294
>gi|6692261|gb|AAF24611.1|AC010870_4 putative RNase H [Arabidopsis thaliana]
Length = 290
Score = 190 bits (480), Expect = 5e-046
Identities = 96/142 (67%), Positives = 114/142 (80%), Gaps = 1/142 (0%)
Frame = +1
Query: 208 ACTIEFDGACRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGIATNNVAEYRALILGLEYAL 387
+CTIEFDGA +GNPGKAGAGAVLR++ DN VLFYLR+G+G ATNNVAEYRAL+LGL AL
Sbjct: 150 SCTIEFDGASKGNPGKAGAGAVLRAS-DNSVLFYLREGVGNATNNVAEYRALLLGLRSAL 208
Query: 388 DKGFRNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDLMSRFNSCRIQHIGREFNSE 567
DKGF+NV + GDS+LVC QV W+ NHPK+AEL + AK+LM+ F + I+HI RE NSE
Sbjct: 209 DKGFKNVHVLGDSMLVCMQVQGAWKTNHPKMAELCKQAKELMNSFKTFDIKHIAREKNSE 268
Query: 568 ADAQANRAVNLADGQIQCESRG 633
AD QAN A+ LADGQ Q S G
Sbjct: 269 ADKQANSAIFLADGQTQVISGG 290
>gi|255588182|ref|XP_002534525.1| nuclease, putative [Ricinus communis]
Length = 262
Score = 166 bits (419), Expect = 5e-039
Identities = 85/162 (52%), Positives = 112/162 (69%), Gaps = 1/162 (0%)
Frame = +1
Query: 139 NPETKVAQYERPTCPPPRNFAQVACTIEFDGACRGNPGKAGAGAVLRSTHDNRVLFYLRQ 318
+P K A+ + T + +C +EFDGA +GNPG AGAGA+LR+T D R++ LR+
Sbjct: 97 DPLRKHAKLDNQTEAQALYYDDDSCILEFDGASKGNPGPAGAGALLRTT-DGRIICRLRE 155
Query: 319 GLGIATNNVAEYRALILGLEYALDKGFRNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEY 498
GLG TNNVAEYRA+ILG++YAL KG+ +R++GDS LVC+QV W+V H + L E
Sbjct: 156 GLGQVTNNVAEYRAMILGMKYALKKGYTKIRVQGDSKLVCSQVQGLWKVKHKDMTNLYEQ 215
Query: 499 AKDLMSRFNSCRIQHIGREFNSEADAQANRAVNLADGQIQCE 624
AK L +F S +I H+ R NSEADAQAN A+ LADGQ+Q E
Sbjct: 216 AKQLKDKFASFQISHVLRALNSEADAQANLAIQLADGQVQEE 257
>gi|224102015|ref|XP_002312512.1| predicted protein [Populus trichocarpa]
Length = 317
Score = 165 bits (416), Expect = 1e-038
Identities = 78/143 (54%), Positives = 107/143 (74%), Gaps = 1/143 (0%)
Frame = +1
Query: 196 FAQVACTIEFDGACRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGIATNNVAEYRALILGL 375
++Q +C +EFDGA +GNPG+AGAGAVLR+ D ++ LR+GLGIATNN+AEYRA++LG+
Sbjct: 174 YSQKSCLLEFDGASKGNPGQAGAGAVLRN-DDGSLICRLREGLGIATNNMAEYRAILLGM 232
Query: 376 EYALDKGFRNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDLMSRFNSCRIQHIGRE 555
+YAL+KG+ + +KGDS LVC Q+ W+ H + L E AK L + F S I H+ RE
Sbjct: 233 KYALEKGYTKIHVKGDSKLVCMQIEGSWKARHENITNLYEEAKKLKNSFLSFHISHVPRE 292
Query: 556 FNSEADAQANRAVNLADGQIQCE 624
+NSEAD+QAN A+ LADG++Q E
Sbjct: 293 YNSEADSQANLAIKLADGEVQEE 315
>gi|326488477|dbj|BAJ93907.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 266
Score = 164 bits (414), Expect = 2e-038
Identities = 87/159 (54%), Positives = 112/159 (70%), Gaps = 7/159 (4%)
Frame = +1
Query: 151 KVAQYERPTCPPPRNFAQVACTIEFDGACRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGI 330
KVA+ E P + ++C +EFDGAC+GNPGK+GAG V+R + D ++ LR+GLGI
Sbjct: 111 KVAEQE------PLPDSHLSCILEFDGACKGNPGKSGAGVVVRRS-DGAMIAQLREGLGI 163
Query: 331 ATNNVAEYRALILGLEYALDKGFRNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDL 510
ATNN AEYRAL+LGL YA KGF+ VR +GDS LVCNQV D WRV + +A+L + KDL
Sbjct: 164 ATNNAAEYRALLLGLRYAAKKGFKYVRAQGDSKLVCNQVQDLWRVRNDNMADLCKKVKDL 223
Query: 511 MSRFNSCRIQHIGREFNSEADAQANRAVNLADGQIQCES 627
F +I H+ REFN++ADAQAN AV L G+IQ +S
Sbjct: 224 KGSFLQFQINHVLREFNADADAQANFAVELPVGEIQEQS 262
>gi|326499834|dbj|BAJ90752.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 347
Score = 164 bits (414), Expect = 2e-038
Identities = 87/159 (54%), Positives = 112/159 (70%), Gaps = 7/159 (4%)
Frame = +1
Query: 151 KVAQYERPTCPPPRNFAQVACTIEFDGACRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGI 330
KVA+ E P + ++C +EFDGAC+GNPGK+GAG V+R + D ++ LR+GLGI
Sbjct: 192 KVAEQE------PLPDSHLSCILEFDGACKGNPGKSGAGVVVRRS-DGAMIAQLREGLGI 244
Query: 331 ATNNVAEYRALILGLEYALDKGFRNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDL 510
ATNN AEYRAL+LGL YA KGF+ VR +GDS LVCNQV D WRV + +A+L + KDL
Sbjct: 245 ATNNAAEYRALLLGLRYAAKKGFKYVRAQGDSKLVCNQVQDLWRVRNDNMADLCKKVKDL 304
Query: 511 MSRFNSCRIQHIGREFNSEADAQANRAVNLADGQIQCES 627
F +I H+ REFN++ADAQAN AV L G+IQ +S
Sbjct: 305 KGSFLQFQINHVLREFNADADAQANFAVELPVGEIQEQS 343
>gi|326505852|dbj|BAJ91165.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 266
Score = 164 bits (414), Expect = 2e-038
Identities = 87/159 (54%), Positives = 112/159 (70%), Gaps = 7/159 (4%)
Frame = +1
Query: 151 KVAQYERPTCPPPRNFAQVACTIEFDGACRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGI 330
KVA+ E P + ++C +EFDGAC+GNPGK+GAG V+R + D ++ LR+GLGI
Sbjct: 111 KVAEQE------PLPDSHLSCILEFDGACKGNPGKSGAGVVVRRS-DGAMIAQLREGLGI 163
Query: 331 ATNNVAEYRALILGLEYALDKGFRNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDL 510
ATNN AEYRAL+LGL YA KGF+ VR +GDS LVCNQV D WRV + +A+L + KDL
Sbjct: 164 ATNNAAEYRALLLGLRYAAKKGFKYVRAQGDSKLVCNQVQDLWRVRNDNMADLCKKVKDL 223
Query: 511 MSRFNSCRIQHIGREFNSEADAQANRAVNLADGQIQCES 627
F +I H+ REFN++ADAQAN AV L G+IQ +S
Sbjct: 224 KGSFLQFQINHVLREFNADADAQANFAVELPVGEIQEQS 262
>gi|224108115|ref|XP_002314727.1| predicted protein [Populus trichocarpa]
Length = 282
Score = 163 bits (411), Expect = 5e-038
Identities = 80/139 (57%), Positives = 104/139 (74%), Gaps = 1/139 (0%)
Frame = +1
Query: 208 ACTIEFDGACRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGIATNNVAEYRALILGLEYAL 387
+C +EFDGA +GNPG+AGAGAVLR T D ++ LR+GLGIATNN+AEYRA++LG++YAL
Sbjct: 143 SCLLEFDGASKGNPGQAGAGAVLR-TDDGSLICRLREGLGIATNNMAEYRAILLGMKYAL 201
Query: 388 DKGFRNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDLMSRFNSCRIQHIGREFNSE 567
KG+ +++KGDS LVC Q+ W+ H + L AK L + F S I H+ REFNSE
Sbjct: 202 QKGYTKIQVKGDSKLVCMQIQGSWKAKHVNITNLCTEAKKLKNSFLSFHISHVLREFNSE 261
Query: 568 ADAQANRAVNLADGQIQCE 624
ADAQAN AV+LADG++Q E
Sbjct: 262 ADAQANLAVHLADGEVQEE 280
>gi|38636806|dbj|BAD03047.1| putative RNase H domain-containing protein [Oryza
sativa Japonica Group]
Length = 351
Score = 161 bits (406), Expect = 2e-037
Identities = 80/142 (56%), Positives = 104/142 (73%), Gaps = 1/142 (0%)
Frame = +1
Query: 199 AQVACTIEFDGACRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGIATNNVAEYRALILGLE 378
+ ++C +EFDGA +GNPGKAGAGAV+R D V+ LR+GLGIATNN AEYRALILGL
Sbjct: 202 SSLSCLLEFDGASKGNPGKAGAGAVIRRL-DGTVIAQLREGLGIATNNAAEYRALILGLT 260
Query: 379 YALDKGFRNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDLMSRFNSCRIQHIGREF 558
YA KGF+ +R +GDS LVCNQV D WR H +A+L + K++ RF++ +I H+ REF
Sbjct: 261 YAAKKGFKYIRAQGDSKLVCNQVSDVWRARHDTMADLCKRVKEIKGRFHTFQINHVLREF 320
Query: 559 NSEADAQANRAVNLADGQIQCE 624
N++ADAQAN AV L ++ E
Sbjct: 321 NTDADAQANLAVELPGEKLLSE 342
>gi|225452547|ref|XP_002280233.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 288
Score = 160 bits (403), Expect = 4e-037
Identities = 80/136 (58%), Positives = 105/136 (77%), Gaps = 1/136 (0%)
Frame = +1
Query: 217 IEFDGACRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGIATNNVAEYRALILGLEYALDKG 396
++FDGA +GNPG+AGAGAVLR+ D + +LR+G+GIATNNVAEYRALILG++YAL KG
Sbjct: 151 LQFDGASKGNPGQAGAGAVLRA-DDGSAVIHLREGVGIATNNVAEYRALILGMKYALKKG 209
Query: 397 FRNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDLMSRFNSCRIQHIGREFNSEADA 576
+ +R +GDS LVC Q W+ + +A+L E AK+L +F S +I+H+ REFNSEADA
Sbjct: 210 IKRIRARGDSQLVCMQFQGLWKTKNQNMADLCEEAKELGKKFLSFQIEHVLREFNSEADA 269
Query: 577 QANRAVNLADGQIQCE 624
QAN AVNL +GQ+Q E
Sbjct: 270 QANLAVNLTNGQVQEE 285
>gi|296087711|emb|CBI34967.3| unnamed protein product [Vitis vinifera]
Length = 287
Score = 160 bits (403), Expect = 4e-037
Identities = 80/136 (58%), Positives = 105/136 (77%), Gaps = 1/136 (0%)
Frame = +1
Query: 217 IEFDGACRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGIATNNVAEYRALILGLEYALDKG 396
++FDGA +GNPG+AGAGAVLR+ D + +LR+G+GIATNNVAEYRALILG++YAL KG
Sbjct: 150 LQFDGASKGNPGQAGAGAVLRA-DDGSAVIHLREGVGIATNNVAEYRALILGMKYALKKG 208
Query: 397 FRNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDLMSRFNSCRIQHIGREFNSEADA 576
+ +R +GDS LVC Q W+ + +A+L E AK+L +F S +I+H+ REFNSEADA
Sbjct: 209 IKRIRARGDSQLVCMQFQGLWKTKNQNMADLCEEAKELGKKFLSFQIEHVLREFNSEADA 268
Query: 577 QANRAVNLADGQIQCE 624
QAN AVNL +GQ+Q E
Sbjct: 269 QANLAVNLTNGQVQEE 284
>gi|194700066|gb|ACF84117.1| unknown [Zea mays]
Length = 269
Score = 159 bits (401), Expect = 7e-037
Identities = 80/143 (55%), Positives = 104/143 (72%), Gaps = 1/143 (0%)
Frame = +1
Query: 199 AQVACTIEFDGACRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGIATNNVAEYRALILGLE 378
+ ++C +EFDGA +GNPGKAGAGA++R D V+ LR+GLGIATNN AEYRALILGL
Sbjct: 124 SHLSCILEFDGASKGNPGKAGAGAIIRQV-DGSVIAQLREGLGIATNNAAEYRALILGLT 182
Query: 379 YALDKGFRNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDLMSRFNSCRIQHIGREF 558
YA KGF+ +R +GDS LVCNQV D WRV + +A + K+L F+ +I+H+ RE+
Sbjct: 183 YAAKKGFKYIRAQGDSKLVCNQVQDIWRVKNDNMASFCKKVKELKGTFHLFQIRHVLREY 242
Query: 559 NSEADAQANRAVNLADGQIQCES 627
NS ADAQAN AV L G++Q +S
Sbjct: 243 NSAADAQANFAVELPVGEVQEQS 265
>gi|226495263|ref|NP_001141955.1| hypothetical protein LOC100274104 [Zea mays]
Length = 192
Score = 159 bits (401), Expect = 7e-037
Identities = 80/143 (55%), Positives = 104/143 (72%), Gaps = 1/143 (0%)
Frame = +1
Query: 199 AQVACTIEFDGACRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGIATNNVAEYRALILGLE 378
+ ++C +EFDGA +GNPGKAGAGA++R D V+ LR+GLGIATNN AEYRALILGL
Sbjct: 47 SHLSCILEFDGASKGNPGKAGAGAIIRQV-DGSVIAQLREGLGIATNNAAEYRALILGLT 105
Query: 379 YALDKGFRNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDLMSRFNSCRIQHIGREF 558
YA KGF+ +R +GDS LVCNQV D WRV + +A + K+L F+ +I+H+ RE+
Sbjct: 106 YAAKKGFKYIRAQGDSKLVCNQVQDIWRVKNDNMASFCKKVKELKGTFHLFQIRHVLREY 165
Query: 559 NSEADAQANRAVNLADGQIQCES 627
NS ADAQAN AV L G++Q +S
Sbjct: 166 NSAADAQANFAVELPVGEVQEQS 188
>gi|195627916|gb|ACG35788.1| retrotransposon protein Ty3-gypsy subclass [Zea
mays]
Length = 336
Score = 159 bits (401), Expect = 7e-037
Identities = 80/143 (55%), Positives = 104/143 (72%), Gaps = 1/143 (0%)
Frame = +1
Query: 199 AQVACTIEFDGACRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGIATNNVAEYRALILGLE 378
+ ++C +EFDGA +GNPGKAGAGA++R D V+ LR+GLGIATNN AEYRALILGL
Sbjct: 191 SHLSCILEFDGASKGNPGKAGAGAIIRQV-DGSVIAQLREGLGIATNNAAEYRALILGLT 249
Query: 379 YALDKGFRNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDLMSRFNSCRIQHIGREF 558
YA KGF+ +R +GDS LVCNQV D WRV + +A + K+L F+ +I+H+ RE+
Sbjct: 250 YAAKKGFKYIRAQGDSKLVCNQVQDIWRVKNDNMASFCKKVKELKGTFHLFQIRHVLREY 309
Query: 559 NSEADAQANRAVNLADGQIQCES 627
NS ADAQAN AV L G++Q +S
Sbjct: 310 NSAADAQANFAVELPVGEVQEQS 332
>gi|255552696|ref|XP_002517391.1| nuclease, putative [Ricinus communis]
Length = 255
Score = 159 bits (401), Expect = 7e-037
Identities = 79/137 (57%), Positives = 107/137 (78%), Gaps = 1/137 (0%)
Frame = +1
Query: 208 ACTIEFDGACRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGIATNNVAEYRALILGLEYAL 387
+C +EFDGA +GNPG AGAGAVLR+ D ++ LR+GLG ATNNVAEYRA+ILGL++AL
Sbjct: 114 SCILEFDGASKGNPGPAGAGAVLRA-EDGSMVCLLREGLGTATNNVAEYRAVILGLKHAL 172
Query: 388 DKGFRNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDLMSRFNSCRIQHIGREFNSE 567
KGF+++R++GDS LV Q+ W++ +A+L + AK+L ++F S +I+H+ REFNSE
Sbjct: 173 RKGFKHIRVRGDSNLVVMQIKGLWKIKSQNVADLCKEAKELKNKFLSFQIEHVLREFNSE 232
Query: 568 ADAQANRAVNLADGQIQ 618
AD QAN AVNL DGQI+
Sbjct: 233 ADTQANLAVNLKDGQIE 249
>gi|224077608|ref|XP_002305325.1| predicted protein [Populus trichocarpa]
Length = 257
Score = 158 bits (397), Expect = 2e-036
Identities = 81/150 (54%), Positives = 108/150 (72%), Gaps = 6/150 (4%)
Frame = +1
Query: 184 PPRNFAQ-----VACTIEFDGACRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGIATNNVA 348
PP+ Q +C +EFDGA +GNPG AGAGAVLR+ D ++ LR+GLGIATNNVA
Sbjct: 103 PPKRLPQPLESIPSCILEFDGASKGNPGPAGAGAVLRA-EDGSMVCRLREGLGIATNNVA 161
Query: 349 EYRALILGLEYALDKGFRNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDLMSRFNS 528
EYRA++LGL++AL KGF+ + ++GDS LVC Q+ W++ + LA+L + AK+L F S
Sbjct: 162 EYRAVLLGLKHALKKGFKYICVQGDSNLVCMQIQGLWKLKNQNLADLCKEAKELKDMFTS 221
Query: 529 CRIQHIGREFNSEADAQANRAVNLADGQIQ 618
+I+H+ REFN EAD QAN A NL DGQI+
Sbjct: 222 FQIKHVPREFNFEADVQANLAANLRDGQIE 251
>gi|242081781|ref|XP_002445659.1| hypothetical protein SORBIDRAFT_07g023590
[Sorghum bicolor]
Length = 268
Score = 158 bits (397), Expect = 2e-036
Identities = 85/168 (50%), Positives = 112/168 (66%), Gaps = 5/168 (2%)
Frame = +1
Query: 124 YDIYWNPETKVAQYERPTCPPPRNFAQVACTIEFDGACRGNPGKAGAGAVLRSTHDNRVL 303
++I P K + + P + ++C +EFDGA +GNPGKAGAGA++R D V+
Sbjct: 102 HEIETGPSKKHPKVDEQELPD----SHLSCILEFDGASKGNPGKAGAGAIIRRI-DGSVI 156
Query: 304 FYLRQGLGIATNNVAEYRALILGLEYALDKGFRNVRIKGDSLLVCNQVLDEWRVNHPKLA 483
LR+GLGIATNN AEYRALILGL YA KGF+ +R +GDS LVCNQV D WRV + +A
Sbjct: 157 AQLREGLGIATNNAAEYRALILGLTYAAKKGFKYIRAQGDSKLVCNQVQDLWRVKNENMA 216
Query: 484 ELNEYAKDLMSRFNSCRIQHIGREFNSEADAQANRAVNLADGQIQCES 627
L + K L F+ +I+H+ RE+NS ADAQAN AV L G++Q +S
Sbjct: 217 GLCKKVKVLKGTFHLFQIRHVLREYNSAADAQANFAVELPVGEVQEQS 264
>gi|334182806|ref|NP_173819.2| RNase H domain-containing protein [Arabidopsis
thaliana]
Length = 353
Score = 156 bits (393), Expect = 6e-036
Identities = 79/163 (48%), Positives = 114/163 (69%), Gaps = 6/163 (3%)
Frame = +1
Query: 130 IYWNPETKVAQYERPTCPPPRNFAQVACTIEFDGACRGNPGKAGAGAVLRSTHDNRVLFY 309
I ++P K+++ E P + C IEFDGA +GNPG +GA AVL+ T D ++
Sbjct: 195 ISYDPLEKLSKVE-----PSAYISDETCFIEFDGASKGNPGLSGAAAVLK-TEDGSLICR 248
Query: 310 LRQGLGIATNNVAEYRALILGLEYALDKGFRNVRIKGDSLLVCNQVLDEWRVNHPKLAEL 489
+RQGLGIATNN AEY ALILGL+YA++KG++N+++KGDS LVC Q+ +W+VNH LA+L
Sbjct: 249 VRQGLGIATNNAAEYHALILGLKYAIEKGYKNIKVKGDSKLVCMQIKGQWKVNHEVLAKL 308
Query: 490 NEYAKDLMSRFNSCRIQHIGREFNSEADAQANRAVNLADGQIQ 618
++ AK L ++ S I H+ R N++AD QAN AV L +G+++
Sbjct: 309 HKEAKLLCNKCVSFEISHVLRNLNADADEQANLAVRLPEGEVE 351
>gi|242089145|ref|XP_002440405.1| hypothetical protein SORBIDRAFT_09g000480
[Sorghum bicolor]
Length = 341
Score = 155 bits (390), Expect = 1e-035
Identities = 77/158 (48%), Positives = 107/158 (67%), Gaps = 1/158 (0%)
Frame = +1
Query: 145 ETKVAQYERPTCPPPRNFAQVACTIEFDGACRGNPGKAGAGAVLRSTHDNRVLFYLRQGL 324
ET+++++ + ++++C +EFDGAC+GNPGK+GAG ++R D V+ LR+GL
Sbjct: 180 ETRLSEHPKAADLETLPDSELSCILEFDGACKGNPGKSGAGVIIRRL-DGSVIALLREGL 238
Query: 325 GIATNNVAEYRALILGLEYALDKGFRNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAK 504
GI TNN AEYRALILGL YA KGF+ +R +GDS LVCNQV +WR +A L + AK
Sbjct: 239 GIMTNNAAEYRALILGLNYASKKGFKYIRCQGDSKLVCNQVRGDWRARSDNMAVLCDIAK 298
Query: 505 DLMSRFNSCRIQHIGREFNSEADAQANRAVNLADGQIQ 618
+L F + +I H+ REFNS+AD QAN LA ++Q
Sbjct: 299 ELKETFLTFQINHVLREFNSDADVQANFGAQLAVDEVQ 336
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,183,829,113,609
Number of Sequences: 15229318
Number of Extensions: 1183829113609
Number of Successful Extensions: 337516149
Number of sequences better than 0.0: 0
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