Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN10102


BLASTX 7.6.2

Query= UN10102 /QuerySize=906
        (905 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT3G01410.1 | Symbols:  | RNase H domain-containi...    190   1e-048
TAIR9_protein||AT3G01410.2 | Symbols:  | RNase H domain-containi...    190   1e-048
TAIR9_protein||AT5G51080.1 | Symbols:  | RNase H domain-containi...    148   5e-036
TAIR9_protein||AT5G51080.2 | Symbols:  | RNase H domain-containi...    148   5e-036
TAIR9_protein||AT5G51080.3 | Symbols:  | RNase H domain-containi...    148   5e-036
TAIR9_protein||AT1G24090.1 | Symbols:  | RNase H domain-containi...    146   2e-035
TAIR9_protein||AT3G06480.1 | Symbols:  | DEAD box RNA helicase, ...     55   7e-008
TAIR9_protein||AT5G14610.1 | Symbols:  | ATP binding / ATP-depen...     49   4e-006

>TAIR9_protein||AT3G01410.1 | Symbols:  | RNase H domain-containing protein |
        chr3:153650-155439 REVERSE

          Length = 295

 Score =  190 bits (481), Expect = 1e-048
 Identities = 96/143 (67%), Positives = 114/143 (79%), Gaps = 1/143 (0%)
 Frame = +1

Query: 208 ACTIEFDGACRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGIATNNVAEYRALILGLEYAL 387
           +CTIEFDGA +GNPGKAGAGAVLR++ DN VLFYLR+G+G ATNNVAEYRAL+LGL  AL
Sbjct: 154 SCTIEFDGASKGNPGKAGAGAVLRAS-DNSVLFYLREGVGNATNNVAEYRALLLGLRSAL 212

Query: 388 DKGFRNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDLMSRFNSCRIQHIGREFNSE 567
           DKGF+NV + GDS+LVC QV   W+ NHPK+AEL + AK+LM+ F +  I+HI RE NSE
Sbjct: 213 DKGFKNVHVLGDSMLVCMQVQGAWKTNHPKMAELCKQAKELMNSFKTFDIKHIAREKNSE 272

Query: 568 ADAQANRAVNLADGQIQCESRG* 636
           AD QAN A+ LADGQ Q  S G*
Sbjct: 273 ADKQANSAIFLADGQTQVISGG* 295

>TAIR9_protein||AT3G01410.2 | Symbols:  | RNase H domain-containing protein |
        chr3:153650-155439 REVERSE

          Length = 295

 Score =  190 bits (481), Expect = 1e-048
 Identities = 96/143 (67%), Positives = 114/143 (79%), Gaps = 1/143 (0%)
 Frame = +1

Query: 208 ACTIEFDGACRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGIATNNVAEYRALILGLEYAL 387
           +CTIEFDGA +GNPGKAGAGAVLR++ DN VLFYLR+G+G ATNNVAEYRAL+LGL  AL
Sbjct: 154 SCTIEFDGASKGNPGKAGAGAVLRAS-DNSVLFYLREGVGNATNNVAEYRALLLGLRSAL 212

Query: 388 DKGFRNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDLMSRFNSCRIQHIGREFNSE 567
           DKGF+NV + GDS+LVC QV   W+ NHPK+AEL + AK+LM+ F +  I+HI RE NSE
Sbjct: 213 DKGFKNVHVLGDSMLVCMQVQGAWKTNHPKMAELCKQAKELMNSFKTFDIKHIAREKNSE 272

Query: 568 ADAQANRAVNLADGQIQCESRG* 636
           AD QAN A+ LADGQ Q  S G*
Sbjct: 273 ADKQANSAIFLADGQTQVISGG* 295

>TAIR9_protein||AT5G51080.1 | Symbols:  | RNase H domain-containing protein |
        chr5:20769022-20770675 REVERSE

          Length = 323

 Score =  148 bits (373), Expect = 5e-036
 Identities = 71/145 (48%), Positives = 102/145 (70%), Gaps = 1/145 (0%)
 Frame = +1

Query: 184 PPRNFAQVACTIEFDGACRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGIATNNVAEYRAL 363
           P  + +   C IEFDGA +GNPG +GA AVL+ T D  ++F +RQGLGIATNN AEY  L
Sbjct: 177 PSADTSYETCIIEFDGASKGNPGLSGAAAVLK-TEDGSLIFKMRQGLGIATNNAAEYHGL 235

Query: 364 ILGLEYALDKGFRNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDLMSRFNSCRIQH 543
           ILGL++A++KG+  +++K DS LVC Q+  +W+VNH  L++L++ AK L  +  S  I H
Sbjct: 236 ILGLKHAIEKGYTKIKVKTDSKLVCMQMKGQWKVNHEVLSKLHKEAKQLSDKCLSFEISH 295

Query: 544 IGREFNSEADAQANRAVNLADGQIQ 618
           + R  NS+AD QAN A  L++G+++
Sbjct: 296 VLRSLNSDADEQANMAARLSEGEVE 320

>TAIR9_protein||AT5G51080.2 | Symbols:  | RNase H domain-containing protein |
        chr5:20769022-20770675 REVERSE

          Length = 323

 Score =  148 bits (373), Expect = 5e-036
 Identities = 71/145 (48%), Positives = 102/145 (70%), Gaps = 1/145 (0%)
 Frame = +1

Query: 184 PPRNFAQVACTIEFDGACRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGIATNNVAEYRAL 363
           P  + +   C IEFDGA +GNPG +GA AVL+ T D  ++F +RQGLGIATNN AEY  L
Sbjct: 177 PSADTSYETCIIEFDGASKGNPGLSGAAAVLK-TEDGSLIFKMRQGLGIATNNAAEYHGL 235

Query: 364 ILGLEYALDKGFRNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDLMSRFNSCRIQH 543
           ILGL++A++KG+  +++K DS LVC Q+  +W+VNH  L++L++ AK L  +  S  I H
Sbjct: 236 ILGLKHAIEKGYTKIKVKTDSKLVCMQMKGQWKVNHEVLSKLHKEAKQLSDKCLSFEISH 295

Query: 544 IGREFNSEADAQANRAVNLADGQIQ 618
           + R  NS+AD QAN A  L++G+++
Sbjct: 296 VLRSLNSDADEQANMAARLSEGEVE 320

>TAIR9_protein||AT5G51080.3 | Symbols:  | RNase H domain-containing protein |
        chr5:20769022-20770486 REVERSE

          Length = 260

 Score =  148 bits (373), Expect = 5e-036
 Identities = 71/145 (48%), Positives = 102/145 (70%), Gaps = 1/145 (0%)
 Frame = +1

Query: 184 PPRNFAQVACTIEFDGACRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGIATNNVAEYRAL 363
           P  + +   C IEFDGA +GNPG +GA AVL+ T D  ++F +RQGLGIATNN AEY  L
Sbjct: 114 PSADTSYETCIIEFDGASKGNPGLSGAAAVLK-TEDGSLIFKMRQGLGIATNNAAEYHGL 172

Query: 364 ILGLEYALDKGFRNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDLMSRFNSCRIQH 543
           ILGL++A++KG+  +++K DS LVC Q+  +W+VNH  L++L++ AK L  +  S  I H
Sbjct: 173 ILGLKHAIEKGYTKIKVKTDSKLVCMQMKGQWKVNHEVLSKLHKEAKQLSDKCLSFEISH 232

Query: 544 IGREFNSEADAQANRAVNLADGQIQ 618
           + R  NS+AD QAN A  L++G+++
Sbjct: 233 VLRSLNSDADEQANMAARLSEGEVE 257

>TAIR9_protein||AT1G24090.1 | Symbols:  | RNase H domain-containing protein |
        chr1:8520834-8524690 FORWARD

          Length = 536

 Score =  146 bits (367), Expect = 2e-035
 Identities = 78/160 (48%), Positives = 109/160 (68%), Gaps = 9/160 (5%)
 Frame = +1

Query: 130 IYWNPETKVAQYERPTCPPPRNFAQVACTIEFDGACRGNPGKAGAGAVLRSTHDNRVLFY 309
           I ++P  K+++ E     P    +   C IEFDGA +GNPG +GA AVL+ T D  ++  
Sbjct: 195 ISYDPLEKLSKVE-----PSAYISDETCFIEFDGASKGNPGLSGAAAVLK-TEDGSLICR 248

Query: 310 LRQGLGIATNNVAEYRALILGLEYALDKGFRNVRIKGDSLLVC---NQVLDEWRVNHPKL 480
           +RQGLGIATNN AEY ALILGL+YA++KG++N+++KGDS LVC    Q+  +W+VNH  L
Sbjct: 249 VRQGLGIATNNAAEYHALILGLKYAIEKGYKNIKVKGDSKLVCMQKQQIKGQWKVNHEVL 308

Query: 481 AELNEYAKDLMSRFNSCRIQHIGREFNSEADAQANRAVNL 600
           A+L++ AK L ++  S  I H+ R  N++AD QAN AV L
Sbjct: 309 AKLHKEAKLLCNKCVSFEISHVLRNLNADADEQANLAVRL 348

>TAIR9_protein||AT3G06480.1 | Symbols:  | DEAD box RNA helicase, putative |
        chr3:1985697-1989666 REVERSE

          Length = 1089

 Score =  55 bits (130), Expect = 7e-008
 Identities = 23/40 (57%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
 Frame = +1

Query:  79 PSLPQPWELRMD-ANGYDIYWNPETKVAQYERPTCPPPRN 195
           P+LPQPW+  +D + G   YWNPET V QYERP+ PPP +
Sbjct:  20 PTLPQPWKGLIDGSTGILYYWNPETNVTQYERPSAPPPHS 59

>TAIR9_protein||AT5G14610.1 | Symbols:  | ATP binding / ATP-dependent helicase/
        helicase/ nucleic acid binding / protein binding | chr5:4711271-4714713
        FORWARD

          Length = 713

 Score =  49 bits (115), Expect = 4e-006
 Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
 Frame = +1

Query:  79 PSLPQPWELRMDA-NGYDIYWNPETKVAQYERPTCPPPRNFAQV 207
           P+LP+PW+  +D+  GY  +WNPET V QYERP    P   A +
Sbjct:  15 PNLPKPWKGLVDSRTGYLYFWNPETNVTQYERPASSAPPKLAAI 58

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,616,215,784
Number of Sequences: 33410
Number of Extensions: 5616215784
Number of Successful Extensions: 210627147
Number of sequences better than 0.0: 0