BLASTX 7.6.2
Query= UN10102 /QuerySize=906
(905 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G01410.1 | Symbols: | RNase H domain-containi... 190 1e-048
TAIR9_protein||AT3G01410.2 | Symbols: | RNase H domain-containi... 190 1e-048
TAIR9_protein||AT5G51080.1 | Symbols: | RNase H domain-containi... 148 5e-036
TAIR9_protein||AT5G51080.2 | Symbols: | RNase H domain-containi... 148 5e-036
TAIR9_protein||AT5G51080.3 | Symbols: | RNase H domain-containi... 148 5e-036
TAIR9_protein||AT1G24090.1 | Symbols: | RNase H domain-containi... 146 2e-035
TAIR9_protein||AT3G06480.1 | Symbols: | DEAD box RNA helicase, ... 55 7e-008
TAIR9_protein||AT5G14610.1 | Symbols: | ATP binding / ATP-depen... 49 4e-006
>TAIR9_protein||AT3G01410.1 | Symbols: | RNase H domain-containing protein |
chr3:153650-155439 REVERSE
Length = 295
Score = 190 bits (481), Expect = 1e-048
Identities = 96/143 (67%), Positives = 114/143 (79%), Gaps = 1/143 (0%)
Frame = +1
Query: 208 ACTIEFDGACRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGIATNNVAEYRALILGLEYAL 387
+CTIEFDGA +GNPGKAGAGAVLR++ DN VLFYLR+G+G ATNNVAEYRAL+LGL AL
Sbjct: 154 SCTIEFDGASKGNPGKAGAGAVLRAS-DNSVLFYLREGVGNATNNVAEYRALLLGLRSAL 212
Query: 388 DKGFRNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDLMSRFNSCRIQHIGREFNSE 567
DKGF+NV + GDS+LVC QV W+ NHPK+AEL + AK+LM+ F + I+HI RE NSE
Sbjct: 213 DKGFKNVHVLGDSMLVCMQVQGAWKTNHPKMAELCKQAKELMNSFKTFDIKHIAREKNSE 272
Query: 568 ADAQANRAVNLADGQIQCESRG* 636
AD QAN A+ LADGQ Q S G*
Sbjct: 273 ADKQANSAIFLADGQTQVISGG* 295
>TAIR9_protein||AT3G01410.2 | Symbols: | RNase H domain-containing protein |
chr3:153650-155439 REVERSE
Length = 295
Score = 190 bits (481), Expect = 1e-048
Identities = 96/143 (67%), Positives = 114/143 (79%), Gaps = 1/143 (0%)
Frame = +1
Query: 208 ACTIEFDGACRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGIATNNVAEYRALILGLEYAL 387
+CTIEFDGA +GNPGKAGAGAVLR++ DN VLFYLR+G+G ATNNVAEYRAL+LGL AL
Sbjct: 154 SCTIEFDGASKGNPGKAGAGAVLRAS-DNSVLFYLREGVGNATNNVAEYRALLLGLRSAL 212
Query: 388 DKGFRNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDLMSRFNSCRIQHIGREFNSE 567
DKGF+NV + GDS+LVC QV W+ NHPK+AEL + AK+LM+ F + I+HI RE NSE
Sbjct: 213 DKGFKNVHVLGDSMLVCMQVQGAWKTNHPKMAELCKQAKELMNSFKTFDIKHIAREKNSE 272
Query: 568 ADAQANRAVNLADGQIQCESRG* 636
AD QAN A+ LADGQ Q S G*
Sbjct: 273 ADKQANSAIFLADGQTQVISGG* 295
>TAIR9_protein||AT5G51080.1 | Symbols: | RNase H domain-containing protein |
chr5:20769022-20770675 REVERSE
Length = 323
Score = 148 bits (373), Expect = 5e-036
Identities = 71/145 (48%), Positives = 102/145 (70%), Gaps = 1/145 (0%)
Frame = +1
Query: 184 PPRNFAQVACTIEFDGACRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGIATNNVAEYRAL 363
P + + C IEFDGA +GNPG +GA AVL+ T D ++F +RQGLGIATNN AEY L
Sbjct: 177 PSADTSYETCIIEFDGASKGNPGLSGAAAVLK-TEDGSLIFKMRQGLGIATNNAAEYHGL 235
Query: 364 ILGLEYALDKGFRNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDLMSRFNSCRIQH 543
ILGL++A++KG+ +++K DS LVC Q+ +W+VNH L++L++ AK L + S I H
Sbjct: 236 ILGLKHAIEKGYTKIKVKTDSKLVCMQMKGQWKVNHEVLSKLHKEAKQLSDKCLSFEISH 295
Query: 544 IGREFNSEADAQANRAVNLADGQIQ 618
+ R NS+AD QAN A L++G+++
Sbjct: 296 VLRSLNSDADEQANMAARLSEGEVE 320
>TAIR9_protein||AT5G51080.2 | Symbols: | RNase H domain-containing protein |
chr5:20769022-20770675 REVERSE
Length = 323
Score = 148 bits (373), Expect = 5e-036
Identities = 71/145 (48%), Positives = 102/145 (70%), Gaps = 1/145 (0%)
Frame = +1
Query: 184 PPRNFAQVACTIEFDGACRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGIATNNVAEYRAL 363
P + + C IEFDGA +GNPG +GA AVL+ T D ++F +RQGLGIATNN AEY L
Sbjct: 177 PSADTSYETCIIEFDGASKGNPGLSGAAAVLK-TEDGSLIFKMRQGLGIATNNAAEYHGL 235
Query: 364 ILGLEYALDKGFRNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDLMSRFNSCRIQH 543
ILGL++A++KG+ +++K DS LVC Q+ +W+VNH L++L++ AK L + S I H
Sbjct: 236 ILGLKHAIEKGYTKIKVKTDSKLVCMQMKGQWKVNHEVLSKLHKEAKQLSDKCLSFEISH 295
Query: 544 IGREFNSEADAQANRAVNLADGQIQ 618
+ R NS+AD QAN A L++G+++
Sbjct: 296 VLRSLNSDADEQANMAARLSEGEVE 320
>TAIR9_protein||AT5G51080.3 | Symbols: | RNase H domain-containing protein |
chr5:20769022-20770486 REVERSE
Length = 260
Score = 148 bits (373), Expect = 5e-036
Identities = 71/145 (48%), Positives = 102/145 (70%), Gaps = 1/145 (0%)
Frame = +1
Query: 184 PPRNFAQVACTIEFDGACRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGIATNNVAEYRAL 363
P + + C IEFDGA +GNPG +GA AVL+ T D ++F +RQGLGIATNN AEY L
Sbjct: 114 PSADTSYETCIIEFDGASKGNPGLSGAAAVLK-TEDGSLIFKMRQGLGIATNNAAEYHGL 172
Query: 364 ILGLEYALDKGFRNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDLMSRFNSCRIQH 543
ILGL++A++KG+ +++K DS LVC Q+ +W+VNH L++L++ AK L + S I H
Sbjct: 173 ILGLKHAIEKGYTKIKVKTDSKLVCMQMKGQWKVNHEVLSKLHKEAKQLSDKCLSFEISH 232
Query: 544 IGREFNSEADAQANRAVNLADGQIQ 618
+ R NS+AD QAN A L++G+++
Sbjct: 233 VLRSLNSDADEQANMAARLSEGEVE 257
>TAIR9_protein||AT1G24090.1 | Symbols: | RNase H domain-containing protein |
chr1:8520834-8524690 FORWARD
Length = 536
Score = 146 bits (367), Expect = 2e-035
Identities = 78/160 (48%), Positives = 109/160 (68%), Gaps = 9/160 (5%)
Frame = +1
Query: 130 IYWNPETKVAQYERPTCPPPRNFAQVACTIEFDGACRGNPGKAGAGAVLRSTHDNRVLFY 309
I ++P K+++ E P + C IEFDGA +GNPG +GA AVL+ T D ++
Sbjct: 195 ISYDPLEKLSKVE-----PSAYISDETCFIEFDGASKGNPGLSGAAAVLK-TEDGSLICR 248
Query: 310 LRQGLGIATNNVAEYRALILGLEYALDKGFRNVRIKGDSLLVC---NQVLDEWRVNHPKL 480
+RQGLGIATNN AEY ALILGL+YA++KG++N+++KGDS LVC Q+ +W+VNH L
Sbjct: 249 VRQGLGIATNNAAEYHALILGLKYAIEKGYKNIKVKGDSKLVCMQKQQIKGQWKVNHEVL 308
Query: 481 AELNEYAKDLMSRFNSCRIQHIGREFNSEADAQANRAVNL 600
A+L++ AK L ++ S I H+ R N++AD QAN AV L
Sbjct: 309 AKLHKEAKLLCNKCVSFEISHVLRNLNADADEQANLAVRL 348
>TAIR9_protein||AT3G06480.1 | Symbols: | DEAD box RNA helicase, putative |
chr3:1985697-1989666 REVERSE
Length = 1089
Score = 55 bits (130), Expect = 7e-008
Identities = 23/40 (57%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Frame = +1
Query: 79 PSLPQPWELRMD-ANGYDIYWNPETKVAQYERPTCPPPRN 195
P+LPQPW+ +D + G YWNPET V QYERP+ PPP +
Sbjct: 20 PTLPQPWKGLIDGSTGILYYWNPETNVTQYERPSAPPPHS 59
>TAIR9_protein||AT5G14610.1 | Symbols: | ATP binding / ATP-dependent helicase/
helicase/ nucleic acid binding / protein binding | chr5:4711271-4714713
FORWARD
Length = 713
Score = 49 bits (115), Expect = 4e-006
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +1
Query: 79 PSLPQPWELRMDA-NGYDIYWNPETKVAQYERPTCPPPRNFAQV 207
P+LP+PW+ +D+ GY +WNPET V QYERP P A +
Sbjct: 15 PNLPKPWKGLVDSRTGYLYFWNPETNVTQYERPASSAPPKLAAI 58
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,616,215,784
Number of Sequences: 33410
Number of Extensions: 5616215784
Number of Successful Extensions: 210627147
Number of sequences better than 0.0: 0
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