BLASTX 7.6.2
Query= UN10139 /QuerySize=537
(536 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G07070.1 | Symbols: | 60S ribosomal protein L... 230 4e-061
TAIR9_protein||AT1G74270.1 | Symbols: | 60S ribosomal protein L... 228 2e-060
TAIR9_protein||AT1G41880.1 | Symbols: | 60S ribosomal protein L... 223 8e-059
TAIR9_protein||AT3G55750.1 | Symbols: | 60S ribosomal protein L... 222 1e-058
>TAIR9_protein||AT1G07070.1 | Symbols: | 60S ribosomal protein L35a (RPL35aA) |
chr1:2168652-2169703 FORWARD
Length = 113
Score = 230 bits (586), Expect = 4e-061
Identities = 108/113 (95%), Positives = 111/113 (98%)
Frame = +2
Query: 50 MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTTEEVTWYKGKRMAYIYKA 229
MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSL+Q+EGVNTTEEV+WYKGKRMAYIYKA
Sbjct: 1 MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLVQVEGVNTTEEVSWYKGKRMAYIYKA 60
Query: 230 KTKKNGSHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGMRVRVFMYPSNI* 388
KTKKNGSHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMG RVRVFMYPSNI*
Sbjct: 61 KTKKNGSHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI* 113
>TAIR9_protein||AT1G74270.1 | Symbols: | 60S ribosomal protein L35a (RPL35aC) |
chr1:27928415-27929466 REVERSE
Length = 113
Score = 228 bits (580), Expect = 2e-060
Identities = 108/113 (95%), Positives = 109/113 (96%)
Frame = +2
Query: 50 MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTTEEVTWYKGKRMAYIYKA 229
MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSL+QIEGVNT EEV WYKGKRMAYIYKA
Sbjct: 1 MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRMAYIYKA 60
Query: 230 KTKKNGSHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGMRVRVFMYPSNI* 388
KTKKNGSHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMG RVRVFMYPSNI*
Sbjct: 61 KTKKNGSHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI* 113
>TAIR9_protein||AT1G41880.1 | Symbols: | 60S ribosomal protein L35a (RPL35aB) |
chr1:15651585-15652427 REVERSE
Length = 112
Score = 223 bits (566), Expect = 8e-059
Identities = 104/112 (92%), Positives = 108/112 (96%)
Frame = +2
Query: 53 VKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTTEEVTWYKGKRMAYIYKAK 232
+KGRQGERVRLYVRGT+LGYKRSKSNQYPNTSLIQIEGVNT EEV WYKGKR+AYIYKAK
Sbjct: 1 MKGRQGERVRLYVRGTVLGYKRSKSNQYPNTSLIQIEGVNTQEEVNWYKGKRLAYIYKAK 60
Query: 233 TKKNGSHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGMRVRVFMYPSNI* 388
TKKNGSHYRCIWGKVTRPHGNSGVVR+KFTSNLPPKSMG RVRVFMYPSNI*
Sbjct: 61 TKKNGSHYRCIWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI* 112
>TAIR9_protein||AT3G55750.1 | Symbols: | 60S ribosomal protein L35a (RPL35aD) |
chr3:20698641-20699553 FORWARD
Length = 112
Score = 222 bits (565), Expect = 1e-058
Identities = 103/112 (91%), Positives = 108/112 (96%)
Frame = +2
Query: 53 VKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTTEEVTWYKGKRMAYIYKAK 232
+KGRQGERVRLYVRGT+LGYKRSKSNQYPNTSL+QIEGVNT EEV WYKGKR+AYIYKAK
Sbjct: 1 MKGRQGERVRLYVRGTVLGYKRSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRLAYIYKAK 60
Query: 233 TKKNGSHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGMRVRVFMYPSNI* 388
TKKNGSHYRCIWGKVTRPHGNSGVVR+KFTSNLPPKSMG RVRVFMYPSNI*
Sbjct: 61 TKKNGSHYRCIWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI* 112
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,616,215,784
Number of Sequences: 33410
Number of Extensions: 5616215784
Number of Successful Extensions: 210627147
Number of sequences better than 0.0: 0
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