Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN10144


BLASTX 7.6.2

Query= UN10144 /QuerySize=1005
        (1004 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT5G63880.1 | Symbols: VPS20.1 | VPS20.1 | chr5:2...    252   5e-067
TAIR9_protein||AT5G09260.1 | Symbols: VPS20.2 | VPS20.2 (VACUOLA...    226   2e-059

>TAIR9_protein||AT5G63880.1 | Symbols: VPS20.1 | VPS20.1 |
        chr5:25563890-25565258 FORWARD

          Length = 220

 Score =  252 bits (641), Expect = 5e-067
 Identities = 132/168 (78%), Positives = 146/168 (86%), Gaps = 1/168 (0%)
 Frame = +1

Query: 352 K*KGEGFVSTEEETDAKDLLKQVDQWVINVEQQLADIELTSKQKAVFESLKQGSSAIKAI 531
           K K    ++  ++   ++LLKQVDQWVINVEQQL DIELTSKQKAVFESLKQG+SAIKAI
Sbjct:  53 KRKDRALLALRKKRTQEELLKQVDQWVINVEQQLTDIELTSKQKAVFESLKQGNSAIKAI 112

Query: 532 QSEVDLDDVQKLMDDTADAKAYQDELNAILGEKLSAEDEEEILAEFDNLESQLAVDEMPD 711
           QSE+DLDDVQKLMDDTADAKAYQDELNAILGEKLSAEDEE+ILAEFDNLESQL VDEMP+
Sbjct: 113 QSELDLDDVQKLMDDTADAKAYQDELNAILGEKLSAEDEEDILAEFDNLESQLIVDEMPE 172

Query: 712 VPTTEPQESEKIDLPDVPTRNP-SLPC*ITPAESATKRKVLEEPLPA* 852
           VPT E +ESEK+DLPDVPT+ P +    ITPAESATK KVLEEPLPA*
Sbjct: 173 VPTKESEESEKLDLPDVPTKTPVASNAEITPAESATKTKVLEEPLPA* 220


 Score =  123 bits (307), Expect = 2e-028
 Identities = 62/69 (89%), Positives = 67/69 (97%)
 Frame = +2

Query: 197 MGNMFVKKPQITDVDRAILSLKTQRRKLGQYQQQLEKVIEAEKQAARDLIRENRKERVLL 376
           MGN+FVKKPQIT+VDRAILSLKTQRRKLGQYQQ+LEKVIEAEKQAARDLIRE RK+R LL
Sbjct:   1 MGNLFVKKPQITEVDRAILSLKTQRRKLGQYQQKLEKVIEAEKQAARDLIREKRKDRALL 60

Query: 377 ALRKKRTQK 403
           ALRKKRTQ+
Sbjct:  61 ALRKKRTQE 69

>TAIR9_protein||AT5G09260.1 | Symbols: VPS20.2 | VPS20.2 (VACUOLAR PROTEIN
        SORTING-ASSOCIATED PROTEIN 20.2) | chr5:2876797-2878355 FORWARD

          Length = 217

 Score =  226 bits (576), Expect = 2e-059
 Identities = 121/169 (71%), Positives = 143/169 (84%), Gaps = 6/169 (3%)
 Frame = +1

Query: 352 K*KGEGFVSTEEETDAKDLLKQVDQWVINVEQQLADIELTSKQKAVFESLKQGSSAIKAI 531
           K K    ++ +++   ++LLKQVDQW+INVEQQLADIELTSKQKAVFESLKQG++AIKAI
Sbjct:  53 KRKDRALLALKKKRTQEELLKQVDQWLINVEQQLADIELTSKQKAVFESLKQGNNAIKAI 112

Query: 532 QSEVDLDDVQKLMDDTADAKAYQDELNAILGEKLSAEDEEEILAEFDNLESQLAVDEMPD 711
           QSEV+LDDVQKLMDDTA+AKAYQDEL+AILGEKLSAEDEEEILAEFDNLES L V++MP+
Sbjct: 113 QSEVNLDDVQKLMDDTAEAKAYQDELSAILGEKLSAEDEEEILAEFDNLESLLIVEDMPE 172

Query: 712 VPTTE--PQESEKIDLPDVPTRNPSLPC*ITPAESATKRKVLEEPLPA* 852
           VPTTE  P+E EK+DLPDVPT+ P      +   ++TKRKVLEEPL A*
Sbjct: 173 VPTTELMPEEPEKMDLPDVPTKAPV----ASNETTSTKRKVLEEPLEA* 217


 Score =  122 bits (304), Expect = 5e-028
 Identities = 61/69 (88%), Positives = 67/69 (97%)
 Frame = +2

Query: 197 MGNMFVKKPQITDVDRAILSLKTQRRKLGQYQQQLEKVIEAEKQAARDLIRENRKERVLL 376
           MGN+FVKKP+IT+VDRAILSLKTQRRKLGQYQQQLEKVIEAEKQAARDLIRE RK+R LL
Sbjct:   1 MGNLFVKKPKITEVDRAILSLKTQRRKLGQYQQQLEKVIEAEKQAARDLIREKRKDRALL 60

Query: 377 ALRKKRTQK 403
           AL+KKRTQ+
Sbjct:  61 ALKKKRTQE 69

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,616,215,784
Number of Sequences: 33410
Number of Extensions: 5616215784
Number of Successful Extensions: 210627147
Number of sequences better than 0.0: 0