BLASTX 7.6.2
Query= UN10225 /QuerySize=1217
(1216 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G41270.1 | Symbols: | FUNCTIONS IN: molecular... 321 8e-088
>TAIR9_protein||AT5G41270.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: male gametophyte; EXPRESSED
DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: RNAse P,
Rpr2/Rpp21 subunit (InterPro:IPR007175); Has 45 Blast hits to 45
proteins in 15 species: Archae - 0; Bacteria - 21; Metazoa - 8; Fungi -
0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr5:16507797-16508813 FORWARD
Length = 259
Score = 321 bits (821), Expect = 8e-088
Identities = 182/273 (66%), Positives = 208/273 (76%), Gaps = 24/273 (8%)
Frame = -3
Query: 839 MGKRGGANKLTKAQ--GGPNLKSVLRHEHLKNLALWSTGGDSPIPSLATFFGRRLAADGQ 666
MGKR G KLT Q GGPNLKSVLRHEHLKNLALWS+ GD+PIPSLA+ GRRLAAD +
Sbjct: 1 MGKR-GPKKLTNTQGGGGPNLKSVLRHEHLKNLALWSSTGDTPIPSLASLLGRRLAADTE 59
Query: 665 ASDIPHDPDLFSCQRCETVLQPGFNCNVRIDKVSANKKKHMRTRYKKKPNMFLPQNNVVY 486
++ I DPDL SCQRCET+L+PGFNCNVRI+KVSAN KK R R KK N+ PQNNVVY
Sbjct: 60 STGITTDPDLVSCQRCETILKPGFNCNVRIEKVSANVKK-KRNRCKKSNNICFPQNNVVY 118
Query: 485 YCNLCSHRNLKRGTTKGQMKDMYPPKPKTTR-PRPKIDKEVTVVVAPQEIQ--LPCSPER 315
+CN CSHRNLKRGT KGQMK++YP KPKT R RPKI KE+T+ PQEIQ + SPER
Sbjct: 119 HCNFCSHRNLKRGTAKGQMKELYPFKPKTARSSRPKIKKEMTM---PQEIQSNMLSSPER 175
Query: 314 RVEN---VSVVVNTPKP-MLTLEREKRIRKSKSKKPVEPESVPEKKATVGGVGGGSNKRK 147
V++ V +TPKP MLTLER++RIRK KSKKP EP+SVPEK GGSNKRK
Sbjct: 176 SVKDQVEEKSVGDTPKPMMLTLERDRRIRKPKSKKPSEPQSVPEKTV------GGSNKRK 229
Query: 146 RKA-WTSMKELSETTTTNKSFSSVNFKIPFLL* 51
RK+ WTSMKE++E TNKS + NFKIPFLL*
Sbjct: 230 RKSPWTSMKEIAE---TNKSSKAGNFKIPFLL* 259
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,707,741,344
Number of Sequences: 33410
Number of Extensions: 5707741344
Number of Successful Extensions: 215986263
Number of sequences better than 0.0: 0
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