BLASTX 7.6.2
Query= UN10316 /QuerySize=1075
(1074 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297821595|ref|XP_002878680.1| PAB4 binding protein 4 [Arabido... 503 2e-140
gi|13430610|gb|AAK25927.1|AF360217_1 putative poly(A) binding pr... 501 9e-140
gi|15227815|ref|NP_179916.1| poly(A) binding protein 4 [Arabidop... 501 9e-140
gi|302142286|emb|CBI19489.3| unnamed protein product [Vitis vini... 375 8e-102
gi|118486179|gb|ABK94932.1| unknown [Populus trichocarpa] 362 7e-098
gi|7673355|gb|AAF66823.1|AF190655_1 poly(A)-binding protein [Nic... 346 5e-093
gi|7673357|gb|AAF66824.1|AF190656_1 poly(A)-binding protein [Nic... 344 2e-092
gi|326492626|dbj|BAJ90169.1| predicted protein [Hordeum vulgare ... 319 5e-085
gi|326526505|dbj|BAJ97269.1| predicted protein [Hordeum vulgare ... 319 5e-085
gi|297802580|ref|XP_002869174.1| predicted protein [Arabidopsis ... 314 3e-083
gi|326503608|dbj|BAJ86310.1| predicted protein [Hordeum vulgare ... 309 7e-082
gi|317106693|dbj|BAJ53194.1| JHL03K20.3 [Jatropha curcas] 296 6e-078
gi|317106694|dbj|BAJ53195.1| JHL03K20.4 [Jatropha curcas] 289 7e-076
gi|62321231|dbj|BAD94406.1| putative poly(A) binding protein [Ar... 222 1e-055
gi|7673359|gb|AAF66825.1| poly(A)-binding protein [Nicotiana tab... 209 9e-052
gi|13560783|gb|AAK30205.1|AF349964_1 poly(A)-binding protein [Da... 191 2e-046
gi|217074874|gb|ACJ85797.1| unknown [Medicago truncatula] 189 8e-046
gi|225438781|ref|XP_002283105.1| PREDICTED: hypothetical protein... 139 7e-031
gi|106879567|emb|CAJ38367.1| polyA-binding protein [Plantago major] 136 8e-030
gi|225458678|ref|XP_002284923.1| PREDICTED: hypothetical protein... 135 2e-029
>gi|297821595|ref|XP_002878680.1| PAB4 binding protein 4 [Arabidopsis lyrata
subsp. lyrata]
Length = 655
Score = 503 bits (1294), Expect = 2e-140
Identities = 255/303 (84%), Positives = 274/303 (90%), Gaps = 10/303 (3%)
Frame = +3
Query: 3 KVMRDPSGASKGSGFVAFSAASEASRVLNEMNGKMVSGKPLYVALAQRKEERRAKLQAQF 182
KVMRDPSG SKGSGFVAFSAASEASRVLNEMNGKMV GKPLYVALAQRKEERRAKLQAQF
Sbjct: 353 KVMRDPSGTSKGSGFVAFSAASEASRVLNEMNGKMVGGKPLYVALAQRKEERRAKLQAQF 412
Query: 183 SQMRPAFIPGMGPRMPMFPGGAPGLGQPMFYGQGPPQMIPHQTGFGYQPQMVPGMRPGYF 362
SQMRPAFIPG+GPRMP+FPGGAPGLGQ +FYGQG P +IPHQ GFGYQPQ+VPG+RP +F
Sbjct: 413 SQMRPAFIPGVGPRMPIFPGGAPGLGQQIFYGQGSPPIIPHQPGFGYQPQLVPGLRPSFF 472
Query: 363 GPMMQPGQQGPRPGGRRSGDGPMRHQPQQPMPYMQPQMMAGGRGHRY-PRGRNMQDGPMP 539
PMMQPGQQGPRPGGRRSGDGPMRHQ QQPMPYMQPQMM GRG+RY P GRNM DGPM
Sbjct: 473 -PMMQPGQQGPRPGGRRSGDGPMRHQHQQPMPYMQPQMMPRGRGYRYPPGGRNMPDGPML 531
Query: 540 GGMVPFPYDINGVPL---MPAGALASSLAQASPAHQRTILGETLYPLVNKIEHENAAKVT 710
GGMVP YD+NG+P+ M AG LA+SLA A+PA QRT+LGE+LYPLV++IEHENAAKVT
Sbjct: 532 GGMVPVAYDMNGMPIAQPMSAGQLATSLANATPAQQRTLLGESLYPLVDQIEHENAAKVT 591
Query: 711 GMLLEMDQTEVLHLIESPEALNAKVSEALDVLRNVNQP----SEG-KSGSPSDMMASLSI 875
GMLLEMDQTEVLHL+ESPEALNAKVSEALDVLRNVNQP SEG KSGSPSD+MASLSI
Sbjct: 592 GMLLEMDQTEVLHLLESPEALNAKVSEALDVLRNVNQPSTQVSEGNKSGSPSDLMASLSI 651
Query: 876 NDH 884
NDH
Sbjct: 652 NDH 654
>gi|13430610|gb|AAK25927.1|AF360217_1 putative poly(A) binding protein
[Arabidopsis thaliana]
Length = 662
Score = 501 bits (1289), Expect = 9e-140
Identities = 253/305 (82%), Positives = 272/305 (89%), Gaps = 10/305 (3%)
Frame = +3
Query: 3 KVMRDPSGASKGSGFVAFSAASEASRVLNEMNGKMVSGKPLYVALAQRKEERRAKLQAQF 182
KVMRDPSG SKGSGFVAFSAASEASRVLNEMNGKMV GKPLYVALAQRKEERRAKLQAQF
Sbjct: 358 KVMRDPSGTSKGSGFVAFSAASEASRVLNEMNGKMVGGKPLYVALAQRKEERRAKLQAQF 417
Query: 183 SQMRPAFIPGMGPRMPMFPGGAPGLGQPMFYGQGPPQMIPHQTGFGYQPQMVPGMRPGYF 362
SQMRPAFIPG+GPRMP+F GGAPGLGQ +FYGQGPP +IPHQ GFGYQPQ+VPGMRP +F
Sbjct: 418 SQMRPAFIPGVGPRMPIFTGGAPGLGQQIFYGQGPPPIIPHQPGFGYQPQLVPGMRPAFF 477
Query: 363 -GPMMQPGQQGPRPGGRRSGDGPMRHQPQQPMPYMQPQMMAGGRGHRYPR-GRNMQDGPM 536
GPMMQPGQQGPRPGGRRSGDGPMRHQ QQPMPYMQPQMM GRG+RYP GRNM DGPM
Sbjct: 478 GGPMMQPGQQGPRPGGRRSGDGPMRHQHQQPMPYMQPQMMPRGRGYRYPSGGRNMPDGPM 537
Query: 537 PGGMVPFPYDINGVPL---MPAGALASSLAQASPAHQRTILGETLYPLVNKIEHENAAKV 707
PGGMVP YD+N +P M AG LA+SLA A+PA QRT+LGE+LYPLV++IE E+AAKV
Sbjct: 538 PGGMVPVAYDMNVMPYSQPMSAGQLATSLANATPAQQRTLLGESLYPLVDQIESEHAAKV 597
Query: 708 TGMLLEMDQTEVLHLIESPEALNAKVSEALDVLRNVNQPSE-----GKSGSPSDMMASLS 872
TGMLLEMDQTEVLHL+ESPEALNAKVSEALDVLRNVNQPS KSGSPSD++ASLS
Sbjct: 598 TGMLLEMDQTEVLHLLESPEALNAKVSEALDVLRNVNQPSSQGSDGNKSGSPSDLLASLS 657
Query: 873 INDHL 887
INDHL
Sbjct: 658 INDHL 662
>gi|15227815|ref|NP_179916.1| poly(A) binding protein 4 [Arabidopsis thaliana]
Length = 662
Score = 501 bits (1289), Expect = 9e-140
Identities = 253/305 (82%), Positives = 272/305 (89%), Gaps = 10/305 (3%)
Frame = +3
Query: 3 KVMRDPSGASKGSGFVAFSAASEASRVLNEMNGKMVSGKPLYVALAQRKEERRAKLQAQF 182
KVMRDPSG SKGSGFVAFSAASEASRVLNEMNGKMV GKPLYVALAQRKEERRAKLQAQF
Sbjct: 358 KVMRDPSGTSKGSGFVAFSAASEASRVLNEMNGKMVGGKPLYVALAQRKEERRAKLQAQF 417
Query: 183 SQMRPAFIPGMGPRMPMFPGGAPGLGQPMFYGQGPPQMIPHQTGFGYQPQMVPGMRPGYF 362
SQMRPAFIPG+GPRMP+F GGAPGLGQ +FYGQGPP +IPHQ GFGYQPQ+VPGMRP +F
Sbjct: 418 SQMRPAFIPGVGPRMPIFTGGAPGLGQQIFYGQGPPPIIPHQPGFGYQPQLVPGMRPAFF 477
Query: 363 -GPMMQPGQQGPRPGGRRSGDGPMRHQPQQPMPYMQPQMMAGGRGHRYPR-GRNMQDGPM 536
GPMMQPGQQGPRPGGRRSGDGPMRHQ QQPMPYMQPQMM GRG+RYP GRNM DGPM
Sbjct: 478 GGPMMQPGQQGPRPGGRRSGDGPMRHQHQQPMPYMQPQMMPRGRGYRYPSGGRNMPDGPM 537
Query: 537 PGGMVPFPYDINGVPL---MPAGALASSLAQASPAHQRTILGETLYPLVNKIEHENAAKV 707
PGGMVP YD+N +P M AG LA+SLA A+PA QRT+LGE+LYPLV++IE E+AAKV
Sbjct: 538 PGGMVPVAYDMNVMPYSQPMSAGQLATSLANATPAQQRTLLGESLYPLVDQIESEHAAKV 597
Query: 708 TGMLLEMDQTEVLHLIESPEALNAKVSEALDVLRNVNQPSE-----GKSGSPSDMMASLS 872
TGMLLEMDQTEVLHL+ESPEALNAKVSEALDVLRNVNQPS KSGSPSD++ASLS
Sbjct: 598 TGMLLEMDQTEVLHLLESPEALNAKVSEALDVLRNVNQPSSQGSEGNKSGSPSDLLASLS 657
Query: 873 INDHL 887
INDHL
Sbjct: 658 INDHL 662
>gi|302142286|emb|CBI19489.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 375 bits (962), Expect = 8e-102
Identities = 200/301 (66%), Positives = 235/301 (78%), Gaps = 21/301 (6%)
Frame = +3
Query: 3 KVMRDPSGASKGSGFVAFSAASEASRVLNEMNGKMVSGKPLYVALAQRKEERRAKLQAQF 182
KVMRDPSG S+GSGFVAFS + EASR L EMNGKMV KPLYVALAQRKEERRA+LQAQF
Sbjct: 330 KVMRDPSGISRGSGFVAFSTSEEASRALTEMNGKMVVSKPLYVALAQRKEERRARLQAQF 389
Query: 183 SQMRP-AFIPGMGPRMPMFPGGAPGLGQPMFYGQGPPQMIPHQTGFGYQPQMVPGMRPG- 356
SQMRP + P + PRMPM+P GAPGLGQ +FYGQGPP +IP Q GFGYQ Q+VPGMRPG
Sbjct: 390 SQMRPVSMAPSVAPRMPMYPPGAPGLGQQLFYGQGPPAIIPPQAGFGYQQQLVPGMRPGG 449
Query: 357 -----YFGPMMQPGQQGPRPGGRRSGDGPMRHQPQQPMPYMQPQMM-AGGRGHRYPRGRN 518
+F P++Q GQQG RPGGRR G GP++ Q QQP+P MQ QM+ GGR +RYP GRN
Sbjct: 450 APMPNFFVPLVQQGQQGQRPGGRR-GAGPVQ-QNQQPVPLMQQQMLPRGGRVYRYPPGRN 507
Query: 519 MQDGPMPGGMVPFPYDINGVPLMPAGALASSLAQASPAHQRTILGETLYPLVNKIEHENA 698
M D PMP + P MP ALAS+LA A+P QRT+LGE+LYPLV+++EHE A
Sbjct: 508 MPDVPMPDAAIGQP--------MPISALASALANATPDQQRTMLGESLYPLVDQLEHEMA 559
Query: 699 AKVTGMLLEMDQTEVLHLIESPEALNAKVSEALDVLRNVNQPSEGKSGSPSDMMASLSIN 878
AKVTGMLLEMDQTEVLHL+ESPEAL +KV+EA+DVLRNV Q ++ SP++ +ASLS+N
Sbjct: 560 AKVTGMLLEMDQTEVLHLLESPEALKSKVAEAMDVLRNVAQQ---QANSPTEQLASLSLN 616
Query: 879 D 881
D
Sbjct: 617 D 617
>gi|118486179|gb|ABK94932.1| unknown [Populus trichocarpa]
Length = 408
Score = 362 bits (928), Expect = 7e-098
Identities = 195/313 (62%), Positives = 234/313 (74%), Gaps = 26/313 (8%)
Frame = +3
Query: 3 KVMRDPSGASKGSGFVAFSAASEASRVLNEMNGKMVSGKPLYVALAQRKEERRAKLQAQF 182
KVMRDP+G S+GSGFVAFS EASR L EMNGKMV+ KPLYVALAQRKE+RRA+LQAQF
Sbjct: 102 KVMRDPNGISRGSGFVAFSTPEEASRALLEMNGKMVASKPLYVALAQRKEDRRARLQAQF 161
Query: 183 SQMRP-AFIPGMGPRMPMFPGGAPGLGQPMFYGQGPPQMIPHQTGFGYQPQMVPGMRPG- 356
SQMRP A P +G RMPM+P PGLGQ +FYGQGPP ++P Q GFGYQ Q+VPGMRPG
Sbjct: 162 SQMRPVAMAPSVG-RMPMYPPTGPGLGQQIFYGQGPPAIMPPQPGFGYQQQLVPGMRPGG 220
Query: 357 -----YFGPMMQPGQQGPRPGGRRSGDGPMRHQPQQPMPYMQPQMMAGGRGHRYPRGRNM 521
+F PM+Q GQQG RPGGRR+G G Q QQP+ MQ QM+ GR +RYP GR +
Sbjct: 221 APMPNFFVPMVQQGQQGQRPGGRRAGTG---QQSQQPVQLMQQQMLPRGRVYRYPPGRGL 277
Query: 522 QDGPM---PGGMVPFPYDINGVPL--------MPAGALASSLAQASPAHQRTILGETLYP 668
D PM GGM+ PYD+ G+P+ +P GALA++LA A+P QRT+LGE LYP
Sbjct: 278 PDVPMTGVAGGMLSVPYDMGGMPMRDAALSQPIPIGALATALANATPDQQRTMLGENLYP 337
Query: 669 LVNKIEHENAAKVTGMLLEMDQTEVLHLIESPEALNAKVSEALDVLRNVNQPSEGKSGSP 848
LV ++E E AAKVTGMLLEMDQTEVLHL+ESPEAL +KV+EA++VLR V Q + G
Sbjct: 338 LVEQLEPEAAAKVTGMLLEMDQTEVLHLLESPEALKSKVNEAMEVLRTVQQQATG----T 393
Query: 849 SDMMASLSINDHL 887
+D +ASLS+ND+L
Sbjct: 394 ADQLASLSLNDNL 406
>gi|7673355|gb|AAF66823.1|AF190655_1 poly(A)-binding protein [Nicotiana
tabacum]
Length = 649
Score = 346 bits (886), Expect = 5e-093
Identities = 184/294 (62%), Positives = 218/294 (74%), Gaps = 22/294 (7%)
Frame = +3
Query: 54 FSAASEASRVLNEMNGKMVSGKPLYVALAQRKEERRAKLQAQFSQMRP-AFIPGMGPRMP 230
FS EASR L+EMNGKMV KPLYVALAQRKEERRA+LQAQFSQMRP A + PRMP
Sbjct: 356 FSNPEEASRALSEMNGKMVVSKPLYVALAQRKEERRARLQAQFSQMRPIAMASSVAPRMP 415
Query: 231 MFPGGAPGLGQPMFYGQGPPQMIPHQTGFGYQPQMVPGMRPG------YFGPMMQPGQQG 392
M+P G PGLGQ +FYGQ P M+P Q GFGYQ Q+VPGMRPG +F PM+Q GQQG
Sbjct: 416 MYPPGGPGLGQQIFYGQPQPAMLPPQAGFGYQQQLVPGMRPGGGPMPNFFMPMVQQGQQG 475
Query: 393 PRPGGRRSGDGPMRHQPQQPMPYMQPQMMAGGRGHRYPRGRNMQDGPMP---GGMVPFPY 563
RPGGRR G P++ Q QQP+P MQ QM GRG+RYP GR + D P GGM PY
Sbjct: 476 QRPGGRRGGAVPLQ-QGQQPVPLMQQQMFPRGRGYRYPPGRGLPDVAFPGVGGGMFSIPY 534
Query: 564 DINGVPL--------MPAGALASSLAQASPAHQRTILGETLYPLVNKIEHENAAKVTGML 719
D+ G+P+ +P GALA++LA +SP QRT+LGE LYPLV ++E E AAKVTGML
Sbjct: 535 DMGGMPVRDAGIVQPIPVGALATALANSSPTEQRTMLGENLYPLVEQLEPETAAKVTGML 594
Query: 720 LEMDQTEVLHLIESPEALNAKVSEALDVLRNVNQPSEGKSGSPSDMMASLSIND 881
LEMDQTEVLHL+ESPEAL AKV+EA++VLRNV+Q +S +P+D +ASLS+ND
Sbjct: 595 LEMDQTEVLHLLESPEALKAKVAEAMEVLRNVSQQ---QSSNPADQLASLSLND 645
>gi|7673357|gb|AAF66824.1|AF190656_1 poly(A)-binding protein [Nicotiana
tabacum]
Length = 330
Score = 344 bits (880), Expect = 2e-092
Identities = 183/294 (62%), Positives = 217/294 (73%), Gaps = 22/294 (7%)
Frame = +3
Query: 54 FSAASEASRVLNEMNGKMVSGKPLYVALAQRKEERRAKLQAQFSQMRP-AFIPGMGPRMP 230
FS EASR L+EMNGKMV KPLYVALAQRKEERRA+LQAQFSQMRP A + PRMP
Sbjct: 37 FSNPEEASRALSEMNGKMVVSKPLYVALAQRKEERRARLQAQFSQMRPIAMASSVAPRMP 96
Query: 231 MFPGGAPGLGQPMFYGQGPPQMIPHQTGFGYQPQMVPGMRPG------YFGPMMQPGQQG 392
M+P G PGLGQ +FYGQ P M+P Q GFGYQ Q+VPGMRPG +F PM+Q GQQG
Sbjct: 97 MYPPGGPGLGQQIFYGQPQPAMLPPQAGFGYQQQLVPGMRPGGGPMPNFFMPMVQQGQQG 156
Query: 393 PRPGGRRSGDGPMRHQPQQPMPYMQPQMMAGGRGHRYPRGRNMQDGPMP---GGMVPFPY 563
RPG RR G P++ Q QQP+P MQ QM GRG+RYP GR + D P GGM PY
Sbjct: 157 QRPGSRRGGAVPLQ-QGQQPVPLMQQQMFPRGRGYRYPPGRGLPDVAFPGVGGGMFSIPY 215
Query: 564 DINGVPL--------MPAGALASSLAQASPAHQRTILGETLYPLVNKIEHENAAKVTGML 719
D+ G+P+ +P GALA++LA +SP QRT+LGE LYPLV ++E E AAKVTGML
Sbjct: 216 DMGGMPVRDAGIVQPIPVGALATALANSSPTEQRTMLGENLYPLVEQLEPETAAKVTGML 275
Query: 720 LEMDQTEVLHLIESPEALNAKVSEALDVLRNVNQPSEGKSGSPSDMMASLSIND 881
LEMDQTEVLHL+ESPEAL AKV+EA++VLRNV+Q +S +P+D +ASLS+ND
Sbjct: 276 LEMDQTEVLHLLESPEALKAKVAEAMEVLRNVSQQ---QSSNPADQLASLSLND 326
>gi|326492626|dbj|BAJ90169.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 663
Score = 319 bits (817), Expect = 5e-085
Identities = 174/311 (55%), Positives = 220/311 (70%), Gaps = 25/311 (8%)
Frame = +3
Query: 3 KVMRDPSGASKGSGFVAFSAASEASRVLNEMNGKMVSGKPLYVALAQRKEERRAKLQAQF 182
KVMRD +G +KGSGFVAF ++ +A+R L MNGKMV KPLYVALAQRKEERRA+LQAQF
Sbjct: 355 KVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEERRARLQAQF 414
Query: 183 SQMRPAFIPGMGPRMPMFPGGAPGLGQPMFYGQGPPQMIPHQTGFGYQPQMVPGMRPG-- 356
SQMRP P + PRMPM+P G PG+GQ +FYGQ PP + Q G+G+Q M+PGMRPG
Sbjct: 415 SQMRPVMPPPVAPRMPMYPPGVPGMGQQLFYGQPPPAFVNPQPGYGFQQHMIPGMRPGVA 474
Query: 357 ----YFGPMMQPGQQGPRPGGRRSGDGPMRHQPQQPMPYMQPQMM-AGGR-GHRYPRGRN 518
+ PM+Q GQQ RP GRR+G G M QQPMP QM+ GGR G+RY GR
Sbjct: 475 PMPNFVMPMVQQGQQPQRPSGRRAGAGGM----QQPMPMGHQQMVPRGGRGGYRYASGRG 530
Query: 519 MQDGPM--PGGMVPFPYDI-------NGVP-LMPAGALASSLAQASPAHQRTILGETLYP 668
M + GGM P Y++ G P + +GALAS+LA + P QR +LGE+LYP
Sbjct: 531 MPEAAFRGVGGMAPSLYEMGRMTPGDTGAPQQVSSGALASALANSPPEQQRLMLGESLYP 590
Query: 669 LVNKIEHENAAKVTGMLLEMDQTEVLHLIESPEALNAKVSEALDVLRNVNQPSEGKSGSP 848
LV+++EH+ AAKVTGMLLEMDQTEVLHLIESP+AL +KV+EA++VLR+ Q ++ P
Sbjct: 591 LVDQLEHDQAAKVTGMLLEMDQTEVLHLIESPDALKSKVAEAMEVLRSAQQQ---QTNVP 647
Query: 849 SDMMASLSIND 881
+D +A+LS++D
Sbjct: 648 ADQLAALSLSD 658
>gi|326526505|dbj|BAJ97269.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 663
Score = 319 bits (817), Expect = 5e-085
Identities = 174/311 (55%), Positives = 220/311 (70%), Gaps = 25/311 (8%)
Frame = +3
Query: 3 KVMRDPSGASKGSGFVAFSAASEASRVLNEMNGKMVSGKPLYVALAQRKEERRAKLQAQF 182
KVMRD +G +KGSGFVAF ++ +A+R L MNGKMV KPLYVALAQRKEERRA+LQAQF
Sbjct: 355 KVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQRKEERRARLQAQF 414
Query: 183 SQMRPAFIPGMGPRMPMFPGGAPGLGQPMFYGQGPPQMIPHQTGFGYQPQMVPGMRPG-- 356
SQMRP P + PRMPM+P G PG+GQ +FYGQ PP + Q G+G+Q M+PGMRPG
Sbjct: 415 SQMRPVMPPPVAPRMPMYPPGVPGMGQQLFYGQPPPAFVNPQPGYGFQQHMIPGMRPGVA 474
Query: 357 ----YFGPMMQPGQQGPRPGGRRSGDGPMRHQPQQPMPYMQPQMM-AGGR-GHRYPRGRN 518
+ PM+Q GQQ RP GRR+G G M QQPMP QM+ GGR G+RY GR
Sbjct: 475 PMPNFVMPMVQQGQQPQRPSGRRAGAGGM----QQPMPMGHQQMVPRGGRGGYRYASGRG 530
Query: 519 MQDGPM--PGGMVPFPYDI-------NGVP-LMPAGALASSLAQASPAHQRTILGETLYP 668
M + GGM P Y++ G P + +GALAS+LA + P QR +LGE+LYP
Sbjct: 531 MPEAAFRGVGGMAPSLYEMGRMTPGDTGAPQQVSSGALASALANSPPEQQRLMLGESLYP 590
Query: 669 LVNKIEHENAAKVTGMLLEMDQTEVLHLIESPEALNAKVSEALDVLRNVNQPSEGKSGSP 848
LV+++EH+ AAKVTGMLLEMDQTEVLHLIESP+AL +KV+EA++VLR+ Q ++ P
Sbjct: 591 LVDQLEHDQAAKVTGMLLEMDQTEVLHLIESPDALKSKVAEAMEVLRSAQQQ---QTNVP 647
Query: 849 SDMMASLSIND 881
+D +A+LS++D
Sbjct: 648 ADQLAALSLSD 658
>gi|297802580|ref|XP_002869174.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 625
Score = 314 bits (802), Expect = 3e-083
Identities = 173/278 (62%), Positives = 205/278 (73%), Gaps = 22/278 (7%)
Frame = +3
Query: 3 KVMRDPSGASKGSGFVAFSAASEASRVLNEMNGKMVSGKPLYVALAQRKEERRAKLQAQF 182
KVMRDP+G SKGSGFVAFS EA+ +++++GKM+ KPLYVA+AQRKE+RR AQF
Sbjct: 348 KVMRDPNGTSKGSGFVAFSTPEEATEAMSQLSGKMIESKPLYVAIAQRKEDRR----AQF 403
Query: 183 SQMRP-AFIPGMGPRMPMFPGGAPGLGQPMFYGQGPPQMIPHQTGFGYQPQMVPGMRPG- 356
SQ+RP A P +GPRMP++P G PG+GQ MFYGQGPP MIP Q GFGYQ Q+VPGMRPG
Sbjct: 404 SQVRPVAMQPSVGPRMPVYPPGGPGIGQQMFYGQGPPTMIPPQPGFGYQQQLVPGMRPGG 463
Query: 357 -----YFGPMMQPGQQGPRPGGRRSGDGPMRHQPQQPMPYMQPQMMAGGRGHRYPRGRNM 521
+F PM+Q QQ RPGG R G ++H PQQ P MQ QM GR RYP+GR
Sbjct: 464 GPGPNFFMPMVQ--QQQQRPGGGRR-PGGIQH-PQQQNPMMQQQMHPRGRMFRYPQGRG- 518
Query: 522 QDGPMPGGMVPFPYDINGVPLMPAGALASSLAQASPAHQRTILGETLYPLVNKIEHENAA 701
G VP PYD+ +P GALAS LA ASP QRT+LGE+LYPLV ++E E+AA
Sbjct: 519 -----GSGEVP-PYDMGNNMPLPIGALASHLANASPEQQRTMLGESLYPLVEQLEAESAA 572
Query: 702 KVTGMLLEMDQTEVLHLIESPEALNAKVSEALDVLRNV 815
KVTGMLLEMDQTEVLHL+ESPEAL AKV+EA+DVLR+V
Sbjct: 573 KVTGMLLEMDQTEVLHLLESPEALKAKVAEAMDVLRSV 610
>gi|326503608|dbj|BAJ86310.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 746
Score = 309 bits (790), Expect = 7e-082
Identities = 174/297 (58%), Positives = 209/297 (70%), Gaps = 28/297 (9%)
Frame = +3
Query: 57 SAASEASRVLNEMNGKMVSGKPLYVALAQRKEERRAKLQAQFSQMRPA-FIPGMGPRMPM 233
S EAS+ L EMNGKM+SGKPLYVA AQRKEER+A LQAQFSQMRP P M PR+PM
Sbjct: 452 STREEASQALTEMNGKMISGKPLYVAFAQRKEERKAMLQAQFSQMRPVPMTPSMTPRLPM 511
Query: 234 FPGGAPGLGQPMFYGQGPPQMIPHQTGFGYQPQMVPGMRPG-------YFGPMMQPGQQG 392
+P P LGQ +FYGQ PP M+P Q G+G+Q Q+VPGMRPG YF P++QPGQQG
Sbjct: 512 YP-PMPTLGQQLFYGQAPPAMMPPQPGYGFQQQLVPGMRPGGGAHMPNYFVPVVQPGQQG 570
Query: 393 PRPGGRRSGDGPMRHQPQQPMPYMQPQMMAGGRGHRYPRG-RNMQD-----GPMPGGMVP 554
PRPG RRSG G + Q Q P P+ Q QM+ GR +RYP G R+M + G GGMV
Sbjct: 571 PRPGMRRSGPGSAQGQ-QTPQPFQQ-QMVPRGRVYRYPPGPRHMAEVQQMPGVGVGGMVQ 628
Query: 555 FPYDINGVPLM--------PAGALASSLAQASPAHQRTILGETLYPLVNKIEHENAAKVT 710
PYD+ P+ P G L S+LA A+P QRTILGE+LYPLV K+EH+ AAKVT
Sbjct: 629 -PYDMGSFPVRDAGVSPAPPIGTLTSALANATPEQQRTILGESLYPLVEKLEHQQAAKVT 687
Query: 711 GMLLEMDQTEVLHLIESPEALNAKVSEALDVLRNVNQPSEGKSGSPSDMMASLSIND 881
GMLLEMDQTEVLHL+ESPEAL +KV+EA+DVLRNV Q + +P+ +A LS++D
Sbjct: 688 GMLLEMDQTEVLHLLESPEALKSKVAEAMDVLRNVAQ--QQNPNAPTSQLAGLSLSD 742
>gi|317106693|dbj|BAJ53194.1| JHL03K20.3 [Jatropha curcas]
Length = 642
Score = 296 bits (756), Expect = 6e-078
Identities = 160/306 (52%), Positives = 205/306 (66%), Gaps = 17/306 (5%)
Frame = +3
Query: 3 KVMRDPSGASKGSGFVAFSAASEASRVLNEMNGKMVSGKPLYVALAQRKEERRAKLQAQF 182
KVMRDP+G SKGSGFVA+S A EAS+ L EMNGKM+ KPLYVALAQRKEERRA+LQAQF
Sbjct: 341 KVMRDPNGVSKGSGFVAYSTAEEASKALTEMNGKMIVSKPLYVALAQRKEERRARLQAQF 400
Query: 183 SQMRPAFIPGMGPRMPMFPGGAPGLGQPMFYGQGPPQMIPHQTGFGYQPQMVPGMRPGYF 362
SQMRPA P +GPRMPM+P G PG+GQ +FYGQGPP ++P Q GFGYQ Q+VPGMRP +F
Sbjct: 401 SQMRPAMAPAVGPRMPMYPHGTPGIGQQLFYGQGPPAIVPPQPGFGYQQQLVPGMRPNFF 460
Query: 363 GPMMQPGQQGPRPGGRRSGDGPMRHQPQQPMPYMQPQMMAGGRGHRYPRGRNMQDGPM-- 536
PM+QPGQQ RP GRRSG GP+ QPQQP+P MQPQM+ GR +RYP GR+M D PM
Sbjct: 461 VPMVQPGQQAQRPSGRRSGAGPV--QPQQPLPMMQPQMLPRGRVYRYPPGRSMPDVPMAG 518
Query: 537 -PGGMVPFPYDINGVPLMPAGALASSLAQASPAHQRTILGETLYPLVNKIEHENAAKVTG 713
PGGM+P PYD+ G+P GA + + + A T L + EN +
Sbjct: 519 LPGGMLPVPYDMGGMPFRD-GAFSQPMQTGALA---TALANATPEQQRTLLGENLYPLVD 574
Query: 714 MLLEMDQTEVLHLI---ESPEALNAKVS-EALDV----LRNVNQPSEGKSGSPSDMMASL 869
L + +V ++ + E L+ S E+L+ V + + ++ SP++ MA+L
Sbjct: 575 QLEHENAAKVTGMLLEMDQTEVLHLLESPESLEAKVAEAMEVLRTVQQQANSPTNRMATL 634
Query: 870 SINDHL 887
S+N++L
Sbjct: 635 SLNENL 640
>gi|317106694|dbj|BAJ53195.1| JHL03K20.4 [Jatropha curcas]
Length = 642
Score = 289 bits (738), Expect = 7e-076
Identities = 158/306 (51%), Positives = 201/306 (65%), Gaps = 17/306 (5%)
Frame = +3
Query: 3 KVMRDPSGASKGSGFVAFSAASEASRVLNEMNGKMVSGKPLYVALAQRKEERRAKLQAQF 182
KVMRDP+G S+GSGFVAFS A EASR L EMNGKMV KPLYVALAQRKEERRA+LQAQ+
Sbjct: 341 KVMRDPNGVSRGSGFVAFSTAEEASRALTEMNGKMVVSKPLYVALAQRKEERRARLQAQY 400
Query: 183 SQMRPAFIPGMGPRMPMFPGGAPGLGQPMFYGQGPPQMIPHQTGFGYQPQMVPGMRPGYF 362
SQ+RPA P +GPRMP++P G PG+G +FYGQGPP ++P Q GFGYQ Q+VPGMRP +F
Sbjct: 401 SQIRPAMAPPIGPRMPIYPPGTPGIGHQLFYGQGPPAIVPPQPGFGYQQQLVPGMRPNFF 460
Query: 363 GPMMQPGQQGPRPGGRRSGDGPMRHQPQQPMPYMQPQMMAGGRGHRYPRGRNMQDGPM-- 536
PM+QPGQQ RP GRRSG G + QPQQP+P MQPQM+ GR +RYP GR+M D PM
Sbjct: 461 VPMVQPGQQAQRPSGRRSGAGAV--QPQQPLPMMQPQMLPRGRVYRYPPGRSMPDVPMAG 518
Query: 537 -PGGMVPFPYDINGVPLMPAGALASSLAQASPAHQRTILGETLYPLVNKIEHENAAKVTG 713
PGGM+P PYD+ G+P GA + + + A T L + + EN +
Sbjct: 519 LPGGMLPVPYDMGGMPFRD-GAFSQPVQTGALA---TALANAMPEQQRTLLGENLYPLVD 574
Query: 714 MLLEMDQTEVL-HLIESPEALNAKVSEALDVLR-------NVNQPSEGKSGSPSDMMASL 869
L + +V L+E + + E+ + L+ V + + + SP+D MA+L
Sbjct: 575 QLEHENAAKVTGMLLEMDQTEVLHLLESPESLKAKVAEAMEVLRTVQQQVNSPTDRMATL 634
Query: 870 SINDHL 887
S+ND L
Sbjct: 635 SLNDSL 640
>gi|62321231|dbj|BAD94406.1| putative poly(A) binding protein [Arabidopsis
thaliana]
Length = 154
Score = 222 bits (564), Expect = 1e-055
Identities = 117/154 (75%), Positives = 130/154 (84%), Gaps = 9/154 (5%)
Frame = +3
Query: 453 MPYMQPQMMAGGRGHRYPR-GRNMQDGPMPGGMVPFPYDINGVPL---MPAGALASSLAQ 620
MPYMQPQMM GRG+RYP GRNM DGPMPGGMVP YD+N +P M AG LA+SLA
Sbjct: 1 MPYMQPQMMPRGRGYRYPSGGRNMPDGPMPGGMVPVAYDMNVMPYSQPMSAGQLATSLAN 60
Query: 621 ASPAHQRTILGETLYPLVNKIEHENAAKVTGMLLEMDQTEVLHLIESPEALNAKVSEALD 800
A+PA QRT+LGE+LYPLV++IE E+AAKVTGMLLEMDQTEVLHL+ESPEALNAKVSEALD
Sbjct: 61 ATPAQQRTLLGESLYPLVDQIESEHAAKVTGMLLEMDQTEVLHLLESPEALNAKVSEALD 120
Query: 801 VLRNVNQPSE-----GKSGSPSDMMASLSINDHL 887
VLRNVNQPS KSGSPSD++ASLSINDHL
Sbjct: 121 VLRNVNQPSSQGSEGNKSGSPSDLLASLSINDHL 154
>gi|7673359|gb|AAF66825.1| poly(A)-binding protein [Nicotiana tabacum]
Length = 479
Score = 209 bits (530), Expect = 9e-052
Identities = 116/197 (58%), Positives = 143/197 (72%), Gaps = 20/197 (10%)
Frame = +3
Query: 327 PQMVPG--MRPGYFGPMMQPGQQGPRPGGRRSGDGPMRHQPQQPMPYMQPQMMAGGRGHR 500
P M PG P +F P++Q GQQG RPGGRR G GP++ Q QQPMP MQ QM+ GR +R
Sbjct: 285 PGMRPGGAPMPNFFMPLVQQGQQGQRPGGRR-GAGPVQ-QTQQPMPLMQQQMLPRGRMYR 342
Query: 501 YPRGRNMQDGPM---PGGMVPFPYDINGV--------PLMPAGALASSLAQASPAHQRTI 647
YP GRN +GPM PGGM+ PYD+ G+ MP LAS+LA A P QRT+
Sbjct: 343 YPPGRNGPEGPMPGVPGGMLSVPYDMGGMLPRDSAMGQPMPISTLASALANAPPEQQRTM 402
Query: 648 LGETLYPLVNKIEHENAAKVTGMLLEMDQTEVLHLIESPEALNAKVSEALDVLRNVNQPS 827
LGE+LYPLV+++EHE+AAKVTGMLLEMDQTEVLHL+ESPEAL AKV+EA++VLRNV Q +
Sbjct: 403 LGESLYPLVDQLEHEHAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRNVQQTT 462
Query: 828 EGKSGSPSDMMASLSIN 878
+P+D +ASLS+N
Sbjct: 463 -----NPADQLASLSLN 474
>gi|13560783|gb|AAK30205.1|AF349964_1 poly(A)-binding protein [Daucus carota]
Length = 658
Score = 191 bits (484), Expect = 2e-046
Identities = 106/180 (58%), Positives = 131/180 (72%), Gaps = 15/180 (8%)
Frame = +3
Query: 327 PQMVP--GMRPGYFGPMMQPGQQGPRPGGRRSGDGPMRHQPQQPMPYMQPQMMAGGRGHR 500
P M P G P +F PM+Q GQQG RPGGRR G GP + Q QQP+P M Q+M GR +R
Sbjct: 465 PGMRPGGGPMPNFFMPMVQQGQQGQRPGGRR-GAGPAQ-QTQQPVPMMPQQLMPRGRMYR 522
Query: 501 YPRGRNMQDGPMP---GGMVPFPYDINGV--------PLMPAGALASSLAQASPAHQRTI 647
+P GRN+ D MP GGM+P PY++ G+ MP ALAS+LA A QRT+
Sbjct: 523 FPPGRNVGDVTMPGVGGGMLPVPYNMGGMLPREAAMGQPMPITALASALANAPADQQRTM 582
Query: 648 LGETLYPLVNKIEHENAAKVTGMLLEMDQTEVLHLIESPEALNAKVSEALDVLRNVNQPS 827
LGE LYPLV+++EH++AAKVTGMLLEMDQTEVLHL+ESP+AL AKV+EA+DVLRNV+QP+
Sbjct: 583 LGENLYPLVDQLEHDHAAKVTGMLLEMDQTEVLHLLESPDALKAKVAEAMDVLRNVSQPN 642
>gi|217074874|gb|ACJ85797.1| unknown [Medicago truncatula]
Length = 494
Score = 189 bits (479), Expect = 8e-046
Identities = 96/161 (59%), Positives = 116/161 (72%), Gaps = 9/161 (5%)
Frame = +3
Query: 3 KVMRDPSGASKGSGFVAFSAASEASRVLNEMNGKMVSGKPLYVALAQRKEERRAKLQAQF 182
K++RDP G S+GSGFVAFS EA+R L EMNGKMV+GKPLYVA AQ+KEER+A+L AQF
Sbjct: 336 KILRDPQGISRGSGFVAFSTPEEATRALAEMNGKMVAGKPLYVAPAQKKEERKARLPAQF 395
Query: 183 SQMRPAFIPGMGPRMPMFPGGAPGLGQPMFYGQGPPQMIPHQTGFGYQPQMVPGMRPG-- 356
SQ+RP + + PR+P +P G PG+GQ + YGQ PP I Q GFGY Q+VPGMRPG
Sbjct: 396 SQVRPVTMAPIAPRLPFYPAGVPGMGQQIMYGQAPPAFI-SQAGFGYPQQLVPGMRPGGA 454
Query: 357 ----YFGPMMQPGQQGPRPGGRRSGDGPMRHQPQQPMPYMQ 467
+F PM+Q GQQG RPGGRR G PM+ P +P MQ
Sbjct: 455 PMPNFFMPMVQQGQQGQRPGGRR-GASPMQQLPHS-LPMMQ 493
>gi|225438781|ref|XP_002283105.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 654
Score = 139 bits (350), Expect = 7e-031
Identities = 91/188 (48%), Positives = 115/188 (61%), Gaps = 14/188 (7%)
Frame = +3
Query: 336 VPGMRPGYFGPMMQPGQQGPRPGGRRSGDGPMRHQPQQPMP------YMQPQMMAGGRGH 497
VP ++PG P +PG + G + P+ QQ +P Y + MA
Sbjct: 471 VPMVQPGQ--PNQRPGGRRSGTGPVQQTQQPLPLMQQQMLPRGRVYRYPPGRNMADVPIP 528
Query: 498 RYPRGRNMQDGPMPGGMVPFPYDINGVPLMPAGALASSLAQASPAHQRTILGETLYPLVN 677
P G M P +PF P MP GALA++LA A P QRT+LGE LYPLV+
Sbjct: 529 GVPGG--MLSAPYDMAGMPFRDAAVSQP-MPIGALATALANAPPDQQRTLLGENLYPLVD 585
Query: 678 KIEHENAAKVTGMLLEMDQTEVLHLIESPEALNAKVSEALDVLRNVNQPSEGKSGSPSDM 857
++EHE AAKVTGMLLEMDQTEVLHL+ESPEAL AKV+EA++VLRNV Q ++ +P+D
Sbjct: 586 QLEHEMAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRNVAQQ---QANNPTDR 642
Query: 858 MASLSIND 881
MASLS+ND
Sbjct: 643 MASLSLND 650
>gi|106879567|emb|CAJ38367.1| polyA-binding protein [Plantago major]
Length = 314
Score = 136 bits (341), Expect = 8e-030
Identities = 90/179 (50%), Positives = 115/179 (64%), Gaps = 16/179 (8%)
Frame = +3
Query: 375 QPGQQ-GPRPGG--RRSGDGPMRHQPQQPMPYMQPQMMAGGRGHRYP----RGRNMQDGP 533
Q GQ+ G R GG + P+ QQ MP + +M G P G M P
Sbjct: 140 QQGQRPGGRRGGGPMQQAQQPVPVMQQQMMP--RGRMYRFPPGRNVPDVPMTGGGMFSVP 197
Query: 534 MP-GGMVPFPYDINGVPL-MPAGALASSLAQASPAHQRTILGETLYPLVNKIEHENAAKV 707
GM+ P D +P MP ALAS+LA A+P QRT+LGE LYPLV+++EHE+AAKV
Sbjct: 198 YDMTGML--PRDAAAIPQPMPVTALASALANATPEQQRTMLGENLYPLVDQLEHEHAAKV 255
Query: 708 TGMLLEMDQTEVLHLIESPEALNAKVSEALDVLRNVNQPSEGKSGSPSDMMASLSINDH 884
TGMLLEMDQTEVLHL+ESP+AL +KV+EA++VLRNV Q + SP+D +ASLS+ND+
Sbjct: 256 TGMLLEMDQTEVLHLLESPDALKSKVNEAMEVLRNVQQQG---NNSPADQLASLSLNDN 311
>gi|225458678|ref|XP_002284923.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 640
Score = 135 bits (338), Expect = 2e-029
Identities = 74/117 (63%), Positives = 91/117 (77%), Gaps = 4/117 (3%)
Frame = +3
Query: 531 PMPGGMVPFPYDINGVPLMPAGALASSLAQASPAHQRTILGETLYPLVNKIEHENAAKVT 710
P G VP G P MP ALAS+LA A+P QRT+LGE+LYPLV+++EHE AAKVT
Sbjct: 524 PYDMGGVPLRDAAIGQP-MPISALASALANATPDQQRTMLGESLYPLVDQLEHEMAAKVT 582
Query: 711 GMLLEMDQTEVLHLIESPEALNAKVSEALDVLRNVNQPSEGKSGSPSDMMASLSIND 881
GMLLEMDQTEVLHL+ESPEAL +KV+EA+DVLRNV Q ++ SP++ +ASLS+ND
Sbjct: 583 GMLLEMDQTEVLHLLESPEALKSKVAEAMDVLRNVAQQ---QANSPTEQLASLSLND 636
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,183,829,113,609
Number of Sequences: 15229318
Number of Extensions: 1183829113609
Number of Successful Extensions: 337516149
Number of sequences better than 0.0: 0
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