BLASTX 7.6.2
Query= UN10343 /QuerySize=868
(867 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G65260.1 | Symbols: | polyadenylate-binding p... 394 5e-110
TAIR9_protein||AT5G10350.1 | Symbols: | polyadenylate-binding p... 346 2e-095
TAIR9_protein||AT5G10350.2 | Symbols: | polyadenylate-binding p... 314 6e-086
TAIR9_protein||AT5G51120.1 | Symbols: PABN1, ATPABN1 | PABN1 (PO... 273 9e-074
TAIR9_protein||AT3G55460.1 | Symbols: SCL30 | SCL30; RNA binding... 53 2e-007
TAIR9_protein||AT1G74230.1 | Symbols: GR-RBP5 | GR-RBP5 (glycine... 51 1e-006
>TAIR9_protein||AT5G65260.1 | Symbols: | polyadenylate-binding protein family
protein / PABP family protein | chr5:26080501-26082984 REVERSE
Length = 221
Score = 394 bits (1011), Expect = 5e-110
Identities = 193/221 (87%), Positives = 203/221 (91%), Gaps = 9/221 (4%)
Frame = -1
Query: 837 MEEEEHEVYGGEIPDVGEMDGDM-------DMTAADDDAAKELDEMKKRLKEIEDEAAAL 679
MEEEEHEVYGGEIPDVGEMDGDM DM AADDDA KELDEMKKRLKE+EDEAAAL
Sbjct: 1 MEEEEHEVYGGEIPDVGEMDGDMEALNPDLDMAAADDDAVKELDEMKKRLKEMEDEAAAL 60
Query: 678 REMQAKVEKDMGPQDAGTVAADQAGKEEVDARSVFVGNVDYACTPEEVQKHFQSCGTVHR 499
REMQAKVEK+MG QD ++AA+QAGKEEVDARSVFVGNVDYACTPEEVQ+HFQ+CGTVHR
Sbjct: 61 REMQAKVEKEMGAQDPASIAANQAGKEEVDARSVFVGNVDYACTPEEVQQHFQTCGTVHR 120
Query: 498 VTILTDKFGQPKGFAYVEFVEAEAIQEALQLNESELHGRQIKVMPKRTNVPGLKQFRGRR 319
VTILTDKFGQPKGFAYVEFVE EA+QEALQLNESELHGRQ+KV+ KRTNVPGLKQFRGRR
Sbjct: 121 VTILTDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVLQKRTNVPGLKQFRGRR 180
Query: 318 FNPYMG--FRRPFMSPYMYSPYGYGKVPRFRRPMRYMPYQ* 202
FNPYMG FRRPFMSPYMYSPYGYGK PRFRRPMRYMPYQ*
Sbjct: 181 FNPYMGYRFRRPFMSPYMYSPYGYGKAPRFRRPMRYMPYQ* 221
>TAIR9_protein||AT5G10350.1 | Symbols: | polyadenylate-binding protein family
protein / PABP family protein | chr5:3255674-3257746 REVERSE
Length = 218
Score = 346 bits (885), Expect = 2e-095
Identities = 171/218 (78%), Positives = 191/218 (87%), Gaps = 6/218 (2%)
Frame = -1
Query: 837 MEEEEHEVYGGEIPDVGEM---DGDMDMTAADDDAAKELDEMKKRLKEIEDEAAALREMQ 667
MEEEEHEVYGGEIP+VG+ D D+DM+AAD+DA EL EMK+RLKE+E+EAAALREMQ
Sbjct: 1 MEEEEHEVYGGEIPEVGDTDVPDPDIDMSAADEDAVTELAEMKRRLKEMEEEAAALREMQ 60
Query: 666 AKVEKDMG-PQDAGTVAADQAGKEEVDARSVFVGNVDYACTPEEVQKHFQSCGTVHRVTI 490
AKVEK+MG QD ++AA+Q GKEEVDARSV+VGNVDYACTPEEVQ HFQ+CGTV+RVTI
Sbjct: 61 AKVEKEMGATQDPASMAANQEGKEEVDARSVYVGNVDYACTPEEVQLHFQTCGTVNRVTI 120
Query: 489 LTDKFGQPKGFAYVEFVEAEAIQEALQLNESELHGRQIKVMPKRTNVPGLKQFRGRRFNP 310
L DKFGQPKGFAYVEFVE EA+QEALQLNESELHGRQ+KV PKRTNVPG+KQ+ RFNP
Sbjct: 121 LMDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVSPKRTNVPGMKQYHPGRFNP 180
Query: 309 YMG--FRRPFMSPYMYSPYGYGKVPRFRRPMRYMPYQ* 202
MG FRRPF+ PY YSPYGYGK PRFRRPMRYMPYQ*
Sbjct: 181 SMGYRFRRPFVPPYFYSPYGYGKAPRFRRPMRYMPYQ* 218
>TAIR9_protein||AT5G10350.2 | Symbols: | polyadenylate-binding protein family
protein / PABP family protein | chr5:3255808-3257746 REVERSE
Length = 203
Score = 314 bits (803), Expect = 6e-086
Identities = 157/202 (77%), Positives = 177/202 (87%), Gaps = 6/202 (2%)
Frame = -1
Query: 837 MEEEEHEVYGGEIPDVGEM---DGDMDMTAADDDAAKELDEMKKRLKEIEDEAAALREMQ 667
MEEEEHEVYGGEIP+VG+ D D+DM+AAD+DA EL EMK+RLKE+E+EAAALREMQ
Sbjct: 1 MEEEEHEVYGGEIPEVGDTDVPDPDIDMSAADEDAVTELAEMKRRLKEMEEEAAALREMQ 60
Query: 666 AKVEKDMG-PQDAGTVAADQAGKEEVDARSVFVGNVDYACTPEEVQKHFQSCGTVHRVTI 490
AKVEK+MG QD ++AA+Q GKEEVDARSV+VGNVDYACTPEEVQ HFQ+CGTV+RVTI
Sbjct: 61 AKVEKEMGATQDPASMAANQEGKEEVDARSVYVGNVDYACTPEEVQLHFQTCGTVNRVTI 120
Query: 489 LTDKFGQPKGFAYVEFVEAEAIQEALQLNESELHGRQIKVMPKRTNVPGLKQFRGRRFNP 310
L DKFGQPKGFAYVEFVE EA+QEALQLNESELHGRQ+KV PKRTNVPG+KQ+ RFNP
Sbjct: 121 LMDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVSPKRTNVPGMKQYHPGRFNP 180
Query: 309 YMG--FRRPFMSPYMYSPYGYG 250
MG FRRPF+ PY YSPYGYG
Sbjct: 181 SMGYRFRRPFVPPYFYSPYGYG 202
>TAIR9_protein||AT5G51120.1 | Symbols: PABN1, ATPABN1 | PABN1
(POLYADENYLATE-BINDING PROTEIN 1); RNA binding / poly(A) binding /
protein binding | chr5:20779760-20781241 FORWARD
Length = 228
Score = 273 bits (698), Expect = 9e-074
Identities = 145/225 (64%), Positives = 168/225 (74%), Gaps = 24/225 (10%)
Frame = -1
Query: 825 EHEVYGGEIP--DVGEMD--------GDMDMTAADDD-----AAKELDEMKKRLKEIEDE 691
EHEVYGGEIP + GEMD G+ A D++ ++++L++MKKR+KEIE+E
Sbjct: 8 EHEVYGGEIPEEEEGEMDTEEYEEHGGEEGAAAGDEELEPGSSSRDLEDMKKRIKEIEEE 67
Query: 690 AAALREMQAKVEKDMGPQDAGTVAADQAGKEEVDARSVFVGNVDYACTPEEVQKHFQSCG 511
A ALREMQAK EKDMG + A KEEVD+RS++VGNVDYACTPEEVQ+HFQSCG
Sbjct: 68 AGALREMQAKAEKDMGASQDPSGGVSAAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCG 127
Query: 510 TVHRVTILTDKFGQPKGFAYVEFVEAEAIQEALQLNESELHGRQIKVMPKRTNVPGLKQF 331
TV+RVTILTDKFGQPKGFAYVEFVE EA+Q +L LNESELHGRQIKV KRTNVPG++QF
Sbjct: 128 TVNRVTILTDKFGQPKGFAYVEFVEVEAVQNSLILNESELHGRQIKVSAKRTNVPGMRQF 187
Query: 330 --RGRRFNPYMGFRR--PFMSPYMYSPYGYGKVPRFRRPMRYMPY 208
RGR F P GF PF Y PY YG+VPRFRRPMRY PY
Sbjct: 188 RGRGRPFRPMRGFMPGVPF-----YPPYAYGRVPRFRRPMRYRPY 227
>TAIR9_protein||AT3G55460.1 | Symbols: SCL30 | SCL30; RNA binding / nucleic acid
binding / nucleotide binding | chr3:20561024-20563502 FORWARD
Length = 263
Score = 53 bits (126), Expect = 2e-007
Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Frame = -1
Query: 582 SVFVGNVDYACTPEEVQKHFQSCGTVHRVTILTDKF-GQPKGFAYVEFVEAEAIQEALQ- 409
S+ V N+ C PEE+++ F+ G V V I D + GQP+GFA+VEFV+A EA +
Sbjct: 48 SLLVRNIPLDCRPEELREPFERFGPVRDVYIPRDYYSGQPRGFAFVEFVDAYDAGEAQRS 107
Query: 408 LNESELHGRQIKVM 367
+N GR+I V+
Sbjct: 108 MNRRSFAGREITVV 121
>TAIR9_protein||AT1G74230.1 | Symbols: GR-RBP5 | GR-RBP5 (glycine-rich
RNA-binding protein 5); ATP binding / RNA binding |
chr1:27915346-27916857 FORWARD
Length = 290
Score = 51 bits (120), Expect = 1e-006
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Frame = -1
Query: 594 VDARSVFVGNVDYACTPEEVQKHFQSCGTVHRVTILTDK-FGQPKGFAYVEFVEAEAIQE 418
+ + +FVG + Y+ +++ F G V I+ D+ G+ +GFA+V F E
Sbjct: 31 MSSSKIFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASN 90
Query: 417 ALQLNESELHGRQIKV 370
A+QL+ +LHGR+I+V
Sbjct: 91 AMQLDGQDLHGRRIRV 106
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,751,211,695
Number of Sequences: 33410
Number of Extensions: 5751211695
Number of Successful Extensions: 216055498
Number of sequences better than 0.0: 0
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