BLASTX 7.6.2
Query= UN10482 /QuerySize=1178
(1177 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G24490.1 | Symbols: RPA2, ATRPA2, ROR1 | RPA2 ... 456 2e-128
TAIR9_protein||AT2G24490.2 | Symbols: RPA2, ATRPA2, ROR1 | RPA2 ... 456 2e-128
TAIR9_protein||AT3G02920.1 | Symbols: | replication protein-rel... 193 2e-049
>TAIR9_protein||AT2G24490.1 | Symbols: RPA2, ATRPA2, ROR1 | RPA2 (REPLICON
PROTEIN A2); protein binding | chr2:10398651-10400416 REVERSE
Length = 280
Score = 456 bits (1172), Expect = 2e-128
Identities = 230/281 (81%), Positives = 249/281 (88%), Gaps = 8/281 (2%)
Frame = +2
Query: 101 MFSNSQFEPNSAFSGGGFMSSQPTQPYESSSSSSSSTT-KGIVPVTVKQINESSHSGGEK 277
MFS+SQFEPNS FSGGGFMSSQP+Q YESSSS++ + +G+VPVTVKQI E S GEK
Sbjct: 1 MFSSSQFEPNSGFSGGGFMSSQPSQAYESSSSTAKNRDFQGLVPVTVKQITECFQSSGEK 60
Query: 278 SGIVINGIELTNVSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESVQ 457
SG+VINGI LTNVSLVGLVCDKD SKVTEV+FTLDDGTGRIDCKRWV+E+FDAREMESV+
Sbjct: 61 SGLVINGISLTNVSLVGLVCDKDESKVTEVRFTLDDGTGRIDCKRWVSETFDAREMESVR 120
Query: 458 DGTYVRLNGHLKTFQGNKQLLVFSVRPIVDFNEVTFHYIECIHFYSKNSESQLGQQVGDA 637
DGTYVRL+GHLKTFQG QLLVFSVRPI+DFNEVTFHYIECIHFYS+NSESQ QQVGD
Sbjct: 121 DGTYVRLSGHLKTFQGKTQLLVFSVRPIMDFNEVTFHYIECIHFYSQNSESQ-RQQVGDV 179
Query: 638 TQSHTL------NANQATTLNPVTPSQNSDGNGRKNLDDMILDYLKQPACTARQQGIHLD 799
TQS N NQAT LNPV SQN+DGNGRKNLDDMILDYLKQPACTARQQGIH+D
Sbjct: 180 TQSVNTTFQGGSNTNQATLLNPVVSSQNNDGNGRKNLDDMILDYLKQPACTARQQGIHID 239
Query: 800 EIAQQLKVPKNKLEGVIQSLEGDGLIYSTIDEYHFKHVEL* 922
EIAQQLK+PKNKLEGV+QSLEGDGLIYSTIDEYHFKHVEL*
Sbjct: 240 EIAQQLKIPKNKLEGVVQSLEGDGLIYSTIDEYHFKHVEL* 280
>TAIR9_protein||AT2G24490.2 | Symbols: RPA2, ATRPA2, ROR1 | RPA2 (REPLICON
PROTEIN A2); protein binding | chr2:10398651-10400416 REVERSE
Length = 280
Score = 456 bits (1172), Expect = 2e-128
Identities = 230/281 (81%), Positives = 249/281 (88%), Gaps = 8/281 (2%)
Frame = +2
Query: 101 MFSNSQFEPNSAFSGGGFMSSQPTQPYESSSSSSSSTT-KGIVPVTVKQINESSHSGGEK 277
MFS+SQFEPNS FSGGGFMSSQP+Q YESSSS++ + +G+VPVTVKQI E S GEK
Sbjct: 1 MFSSSQFEPNSGFSGGGFMSSQPSQAYESSSSTAKNRDFQGLVPVTVKQITECFQSSGEK 60
Query: 278 SGIVINGIELTNVSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESVQ 457
SG+VINGI LTNVSLVGLVCDKD SKVTEV+FTLDDGTGRIDCKRWV+E+FDAREMESV+
Sbjct: 61 SGLVINGISLTNVSLVGLVCDKDESKVTEVRFTLDDGTGRIDCKRWVSETFDAREMESVR 120
Query: 458 DGTYVRLNGHLKTFQGNKQLLVFSVRPIVDFNEVTFHYIECIHFYSKNSESQLGQQVGDA 637
DGTYVRL+GHLKTFQG QLLVFSVRPI+DFNEVTFHYIECIHFYS+NSESQ QQVGD
Sbjct: 121 DGTYVRLSGHLKTFQGKTQLLVFSVRPIMDFNEVTFHYIECIHFYSQNSESQ-RQQVGDV 179
Query: 638 TQSHTL------NANQATTLNPVTPSQNSDGNGRKNLDDMILDYLKQPACTARQQGIHLD 799
TQS N NQAT LNPV SQN+DGNGRKNLDDMILDYLKQPACTARQQGIH+D
Sbjct: 180 TQSVNTTFQGGSNTNQATLLNPVVSSQNNDGNGRKNLDDMILDYLKQPACTARQQGIHID 239
Query: 800 EIAQQLKVPKNKLEGVIQSLEGDGLIYSTIDEYHFKHVEL* 922
EIAQQLK+PKNKLEGV+QSLEGDGLIYSTIDEYHFKHVEL*
Sbjct: 240 EIAQQLKIPKNKLEGVVQSLEGDGLIYSTIDEYHFKHVEL* 280
>TAIR9_protein||AT3G02920.1 | Symbols: | replication protein-related |
chr3:651844-654189 REVERSE
Length = 279
Score = 193 bits (490), Expect = 2e-049
Identities = 103/272 (37%), Positives = 165/272 (60%), Gaps = 13/272 (4%)
Frame = +2
Query: 119 FEPNSAFSGGGFMSSQ-PTQPYESSSSSSSSTTKGIVPVTVKQINESSHSGGEKSGIVIN 295
F+ N+AF+GGGFM SQ TQ +ESSSS + + ++P+T+KQ++ +S +G +S I+
Sbjct: 6 FDGNAAFAGGGFMPSQATTQAHESSSSLKNRDVRTLLPLTLKQLSSASTTG--ESNFSID 63
Query: 296 GIELTNVSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESVQDGTYVR 475
G+++ V +VG + + +++T+V F +DDGTG +DC RW + + EME+V+ G YVR
Sbjct: 64 GVDIKTVVIVGRISRME-NRITQVDFVVDDGTGWVDCVRWCHARQETEEMEAVKLGMYVR 122
Query: 476 LNGHLKTFQGNKQLLVFSVRPIVDFNEVTFHYIECIHFYSKNSESQLGQQVGDATQSHTL 655
L+GHLK FQG + + VFSVRP+ DFNE+ H+ EC++ + N++ + G + T +
Sbjct: 123 LHGHLKIFQGKRSVNVFSVRPVTDFNEIVHHFTECMYVHMYNTKLR-GGSITQDTATPRP 181
Query: 656 NANQATTLNPVTPSQNSDGNGRKN--------LDDMILDYLKQPACTARQQGIHLDEIAQ 811
+T P P Q N N + +L+YL QP + G+H D IA+
Sbjct: 182 QMPYSTMPTPAKPYQTGPSNQFPNQFNDSMHGVKQTVLNYLNQPMHIVSEAGVHCDIIAR 241
Query: 812 QLKVPKNKLEGVIQSLEGDGLIYSTIDEYHFK 907
+L++P +++ ++ L DG IYST+DE FK
Sbjct: 242 ELRIPLLQVKEALEQLSNDGCIYSTLDETCFK 273
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,795,228,757
Number of Sequences: 33410
Number of Extensions: 5795228757
Number of Successful Extensions: 216103070
Number of sequences better than 0.0: 0
|