BLASTX 7.6.2
Query= UN10510 /QuerySize=1525
(1524 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||ATCG00065.1 | Symbols: RPS12A, RPS12 | chloroplas... 163 4e-040
TAIR9_protein||ATCG01230.1 | Symbols: RPS12B, RPS12 | chloroplas... 163 4e-040
TAIR9_protein||ATCG00905.1 | Symbols: RPS12C, RPS12 | chloroplas... 163 4e-040
TAIR9_protein||AT2G07675.1 | Symbols: | ribosomal protein S12 m... 108 1e-023
TAIR9_protein||ATMG00980.1 | Symbols: RPSL2 | ribosomal protein ... 108 1e-023
>TAIR9_protein||ATCG00065.1 | Symbols: RPS12A, RPS12 | chloroplast gene encoding
ribosomal protein s12. The gene is located in three distinct loci on
the chloroplast genome and is transpliced to make one transcript. |
chrC:69611-69724 REVERSE
Length = 124
Score = 163 bits (411), Expect = 4e-040
Identities = 81/82 (98%)
Frame = +3
Query: 1122 TITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGRRVKDLPGVRYHIV 1301
TITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRG RVKDLPGVRYHIV
Sbjct: 39 TITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIV 98
Query: 1302 RGTLDAVGVKDRQQGRSKYGVK 1367
RGTLDAVGVKDRQQGRSKYGVK
Sbjct: 99 RGTLDAVGVKDRQQGRSKYGVK 120
>TAIR9_protein||ATCG01230.1 | Symbols: RPS12B, RPS12 | chloroplast gene encoding
ribosomal protein s12. The gene is located in three distinct loci on
the chloroplast genome and is transpliced to make one transcript. |
chrC:139856-140650 FORWARD
Length = 124
Score = 163 bits (411), Expect = 4e-040
Identities = 81/82 (98%)
Frame = +3
Query: 1122 TITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGRRVKDLPGVRYHIV 1301
TITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRG RVKDLPGVRYHIV
Sbjct: 39 TITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIV 98
Query: 1302 RGTLDAVGVKDRQQGRSKYGVK 1367
RGTLDAVGVKDRQQGRSKYGVK
Sbjct: 99 RGTLDAVGVKDRQQGRSKYGVK 120
>TAIR9_protein||ATCG00905.1 | Symbols: RPS12C, RPS12 | chloroplast gene encoding
ribosomal protein s12. The gene is located in three distinct loci on
the chloroplast genome and is transpliced to make one transcript. |
chrC:97999-98793 REVERSE
Length = 124
Score = 163 bits (411), Expect = 4e-040
Identities = 81/82 (98%)
Frame = +3
Query: 1122 TITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGRRVKDLPGVRYHIV 1301
TITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRG RVKDLPGVRYHIV
Sbjct: 39 TITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIV 98
Query: 1302 RGTLDAVGVKDRQQGRSKYGVK 1367
RGTLDAVGVKDRQQGRSKYGVK
Sbjct: 99 RGTLDAVGVKDRQQGRSKYGVK 120
>TAIR9_protein||AT2G07675.1 | Symbols: | ribosomal protein S12 mitochondrial
family protein | chr2:3270410-3270787 FORWARD
Length = 126
Score = 108 bits (269), Expect = 1e-023
Identities = 51/83 (61%), Positives = 65/83 (78%)
Frame = +3
Query: 1119 STITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGRRVKDLPGVRYHI 1298
ST TPKKPNSA RK+A+VRL++ +I A+IPG GHN QEHS VL+RG RVKD PGV+ H
Sbjct: 38 STRTPKKPNSAPRKIAKVRLSNRHDIFAHIPGEGHNSQEHSTVLIRGGRVKDSPGVKSHC 97
Query: 1299 VRGTLDAVGVKDRQQGRSKYGVK 1367
+RG D +G+ R++GRSKYG +
Sbjct: 98 IRGVKDLMGIPGRRRGRSKYGAE 120
>TAIR9_protein||ATMG00980.1 | Symbols: RPSL2 | ribosomal protein L2 |
chrM:260224-260601 REVERSE
Length = 126
Score = 108 bits (269), Expect = 1e-023
Identities = 51/83 (61%), Positives = 65/83 (78%)
Frame = +3
Query: 1119 STITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHSVVLVRGRRVKDLPGVRYHI 1298
ST TPKKPNSA RK+A+VRL++ +I A+IPG GHN QEHS VL+RG RVKD PGV+ H
Sbjct: 38 STRTPKKPNSAPRKIAKVRLSNRHDIFAHIPGEGHNSQEHSTVLIRGGRVKDSPGVKSHC 97
Query: 1299 VRGTLDAVGVKDRQQGRSKYGVK 1367
+RG D +G+ R++GRSKYG +
Sbjct: 98 IRGVKDLMGIPGRRRGRSKYGAE 120
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,795,228,757
Number of Sequences: 33410
Number of Extensions: 5795228757
Number of Successful Extensions: 216103070
Number of sequences better than 0.0: 0
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