BLASTX 7.6.2
Query= UN10543 /QuerySize=430
(429 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|7209506|dbj|BAA92248.1| pollen coat protein class A no. 1 [Br... 123 6e-027
gi|3395460|emb|CAA06464.1| pollen coat protein, class 'A', 1 (PC... 117 4e-025
gi|7649936|dbj|BAA94096.1| SLR1 binding pollen coat protein [Bra... 67 7e-010
gi|7649804|dbj|BAA94095.1| SLR1 binding pollen coat protein [Bra... 66 9e-010
gi|15076829|gb|AAK82951.1|AF198612_1 pollen coat protein class A... 65 2e-009
gi|3062795|dbj|BAA25682.1| PCP-1 family [Brassica rapa] 64 6e-009
gi|1653972|emb|CAA65766.1| pollen coat protein [Brassica olerace... 61 4e-008
gi|79323033|ref|NP_001031413.1| putative defensin-like protein 1... 60 9e-008
>gi|7209506|dbj|BAA92248.1| pollen coat protein class A no. 1 [Brassica rapa]
Length = 81
Score = 123 bits (308), Expect = 6e-027
Identities = 56/81 (69%), Positives = 61/81 (75%)
Frame = +2
Query: 29 MKNAFKPSLIGLVILTILLFGETVIAQKGKPCYSELPDKTCEIKRCNDQCMKKNKNIRFQ 208
MKN K SLIG +LT+LLFGETVIAQKGKPCYSE PDKTCE+KRC C+KK+K I
Sbjct: 1 MKNTVKLSLIGFFMLTVLLFGETVIAQKGKPCYSEEPDKTCEVKRCKANCVKKHKKILAF 60
Query: 209 GRCIKNVTGEMFCRCQYPCPP 271
CIK G FCRCQYPCPP
Sbjct: 61 TTCIKEKNGNTFCRCQYPCPP 81
>gi|3395460|emb|CAA06464.1| pollen coat protein, class 'A', 1 (PCP-A1) [Brassica
oleracea var. alboglabra]
Length = 81
Score = 117 bits (293), Expect = 4e-025
Identities = 53/81 (65%), Positives = 60/81 (74%)
Frame = +2
Query: 29 MKNAFKPSLIGLVILTILLFGETVIAQKGKPCYSELPDKTCEIKRCNDQCMKKNKNIRFQ 208
MKN K SLIG V+LT+LL GETVIAQK KPCYS+ PDKTCE+ RC C+KK+K I
Sbjct: 1 MKNTVKLSLIGFVMLTVLLLGETVIAQKRKPCYSQEPDKTCEVNRCKANCVKKHKKILAF 60
Query: 209 GRCIKNVTGEMFCRCQYPCPP 271
CIK G M+CRCQYPCPP
Sbjct: 61 TSCIKENNGNMYCRCQYPCPP 81
>gi|7649936|dbj|BAA94096.1| SLR1 binding pollen coat protein [Brassica juncea]
Length = 83
Score = 67 bits (161), Expect = 7e-010
Identities = 40/85 (47%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Frame = +2
Query: 29 MKNAFKPSLIGLVILTILLFGETVIAQKGKP----CYSELPDKT--CEIKRCNDQCMKKN 190
MK ++ SLIGLV+LTILL G V AQKG P C + PD C I +C QC K
Sbjct: 1 MKIYYRSSLIGLVMLTILLLGVVVNAQKGGPVRKQCVEQYPDPNGKCVIDQCKAQCAKNR 60
Query: 191 KNIRFQGRCIKNVTGEMFCRCQYPC 265
K RCI G M CRC Y C
Sbjct: 61 KG--GLARCIDTGKGHMQCRCDYHC 83
>gi|7649804|dbj|BAA94095.1| SLR1 binding pollen coat protein [Brassica napus]
Length = 83
Score = 66 bits (160), Expect = 9e-010
Identities = 40/85 (47%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Frame = +2
Query: 29 MKNAFKPSLIGLVILTILLFGETVIAQKGKP----CYSELPDKT--CEIKRCNDQCMKKN 190
MK ++ SLIGLV+LTILL G V AQKG P C + PD C I +C QC K
Sbjct: 1 MKIYYRSSLIGLVMLTILLLGVVVNAQKGGPVRKQCVEQYPDPNGKCVIGQCKAQCAKNR 60
Query: 191 KNIRFQGRCIKNVTGEMFCRCQYPC 265
K RCI G M CRC Y C
Sbjct: 61 KG--GLARCIDTGKGHMQCRCDYHC 83
>gi|15076829|gb|AAK82951.1|AF198612_1 pollen coat protein class A no. 2
precursor [Brassica napus]
Length = 83
Score = 65 bits (157), Expect = 2e-009
Identities = 39/85 (45%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Frame = +2
Query: 29 MKNAFKPSLIGLVILTILLFGETVIAQKGKP----CYSELPDKT--CEIKRCNDQCMKKN 190
MK ++ SLIGLV+LTILL G AQKG P C + PD C I +C QC K
Sbjct: 1 MKIYYRSSLIGLVMLTILLLGVVANAQKGGPVRKQCVEQYPDPNGKCVIDQCKAQCAKNR 60
Query: 191 KNIRFQGRCIKNVTGEMFCRCQYPC 265
K RCI G M CRC Y C
Sbjct: 61 KG--GLARCIDTGKGHMQCRCDYHC 83
>gi|3062795|dbj|BAA25682.1| PCP-1 family [Brassica rapa]
Length = 83
Score = 64 bits (153), Expect = 6e-009
Identities = 38/85 (44%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Frame = +2
Query: 29 MKNAFKPSLIGLVILTILLFGETVIAQKGKP----CYSELPDKT--CEIKRCNDQCMKKN 190
MK ++ SLIG V+LTILL G AQKG P C + PD C I +C QC K
Sbjct: 1 MKIYYRSSLIGFVMLTILLLGVVANAQKGGPVRKQCVEQYPDPNGKCVIDQCKAQCAKNR 60
Query: 191 KNIRFQGRCIKNVTGEMFCRCQYPC 265
K RCI G M CRC Y C
Sbjct: 61 KG--GLARCIDTGKGHMQCRCDYHC 83
>gi|1653972|emb|CAA65766.1| pollen coat protein [Brassica oleracea var.
alboglabra]
Length = 84
Score = 61 bits (146), Expect = 4e-008
Identities = 37/85 (43%), Positives = 48/85 (56%), Gaps = 7/85 (8%)
Frame = +2
Query: 29 MKNAFKPSLIGLVILTILLFGETVIAQKGK---PCYSELPDK--TCEIKRCNDQCMKKNK 193
MK AFKP LIG +L I LFGET IAQ+ K C L ++ TC +C C+K++K
Sbjct: 1 MKVAFKPWLIGFFMLAIFLFGETAIAQEKKTDNQCNLPLINQSGTCAANQCQAACVKRHK 60
Query: 194 NIRFQGRCIKNVTGEMFCRCQYPCP 268
+ G+C N +M C C Y CP
Sbjct: 61 D--GVGKCTTNPDKKMRCICFYLCP 83
>gi|79323033|ref|NP_001031413.1| putative defensin-like protein 137 [Arabidopsis
thaliana]
Length = 79
Score = 60 bits (143), Expect = 9e-008
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Frame = +2
Query: 32 KNAFKPSLIGLVILTILLFGET-VIAQKGKPCYSELPDKTCEIKRCNDQCMKKNKNIRFQ 208
K F+PS + L+I T+L+ G ++ K C++ L + C C C+KKN +
Sbjct: 2 KKYFQPSFVILIIFTVLVLGVVGNMSVDQKRCWATLKENNCVHDECRSMCLKKNP--KGH 59
Query: 209 GRCIKNVTGEMFCRCQYPCP 268
GRCIK+ G + C C Y CP
Sbjct: 60 GRCIKSSKGRIICLCGYDCP 79
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,212,527,995,479
Number of Sequences: 15229318
Number of Extensions: 1212527995479
Number of Successful Extensions: 354836617
Number of sequences better than 0.0: 0
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