BLASTX 7.6.2
Query= UN10595 /QuerySize=951
(950 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G74050.1 | Symbols: | 60S ribosomal protein L... 429 1e-120
TAIR9_protein||AT1G74060.1 | Symbols: | 60S ribosomal protein L... 428 3e-120
TAIR9_protein||AT1G18540.1 | Symbols: | 60S ribosomal protein L... 412 2e-115
>TAIR9_protein||AT1G74050.1 | Symbols: | 60S ribosomal protein L6 (RPL6C) |
chr1:27847256-27848680 REVERSE
Length = 234
Score = 429 bits (1103), Expect = 1e-120
Identities = 215/234 (91%), Positives = 221/234 (94%)
Frame = -1
Query: 917 MPAKQRTPKVSRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKPKVDAVAEK 738
MPAKQRTPKV+RNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAK KVDA EK
Sbjct: 1 MPAKQRTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEK 60
Query: 737 PPKFYPAEDVKKPLANRRKAKPTKLRSSITPGTVLIILAGRFKGKRVVFLKQLPSGLLLV 558
PPKFYPAEDVKKPL NRR AKPTKLR+SITPGTVLIILAGRFKGKRVVFLKQL SGLLLV
Sbjct: 61 PPKFYPAEDVKKPLPNRRTAKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLV 120
Query: 557 SGPFKINGVPLRRVNQSYVIGTSTKVDISGVSLDKFDDKYFGKVAEKKNKKGEGEFFEAE 378
+GPFKINGVPLRRVNQ+YVIGTSTKVDISGV+LDKFDDKYFGKVAEKK KK EGEFFEAE
Sbjct: 121 TGPFKINGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAE 180
Query: 377 KEEKKVFPQGKKDDQKAVDGALIKAIESVPELKTYLGARFSLKQGMKPHELVF* 216
KEEKK PQ KKDDQKAVD ALIKAIE+VPELKTYLGARFSLKQGMKPHELVF*
Sbjct: 181 KEEKKEIPQVKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF* 234
>TAIR9_protein||AT1G74060.1 | Symbols: | 60S ribosomal protein L6 (RPL6B) |
chr1:27850033-27851299 REVERSE
Length = 234
Score = 428 bits (1099), Expect = 3e-120
Identities = 214/234 (91%), Positives = 220/234 (94%)
Frame = -1
Query: 917 MPAKQRTPKVSRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKPKVDAVAEK 738
MPAKQRT KV+RNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAK KVDA EK
Sbjct: 1 MPAKQRTAKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEK 60
Query: 737 PPKFYPAEDVKKPLANRRKAKPTKLRSSITPGTVLIILAGRFKGKRVVFLKQLPSGLLLV 558
PPKFYPAEDVKKPL NRR AKP KLR+SITPGTVLIILAGRFKGKRVVFLKQL SGLLLV
Sbjct: 61 PPKFYPAEDVKKPLPNRRTAKPAKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLV 120
Query: 557 SGPFKINGVPLRRVNQSYVIGTSTKVDISGVSLDKFDDKYFGKVAEKKNKKGEGEFFEAE 378
+GPFKINGVPLRRVNQ+YVIGTSTKVDISGV+LDKFDDKYFGKVAEKK KK EGEFFEAE
Sbjct: 121 TGPFKINGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAE 180
Query: 377 KEEKKVFPQGKKDDQKAVDGALIKAIESVPELKTYLGARFSLKQGMKPHELVF* 216
KEEKK PQGKKDDQKAVD ALIKAIE+VPELKTYLGARFSLKQGMKPHELVF*
Sbjct: 181 KEEKKEIPQGKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF* 234
>TAIR9_protein||AT1G18540.1 | Symbols: | 60S ribosomal protein L6 (RPL6A) |
chr1:6377448-6378548 REVERSE
Length = 234
Score = 412 bits (1058), Expect = 2e-115
Identities = 203/234 (86%), Positives = 216/234 (92%)
Frame = -1
Query: 917 MPAKQRTPKVSRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKPKVDAVAEK 738
MPA +RTPKV+RNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDA+PKVDA EK
Sbjct: 1 MPAAKRTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAQPKVDAPVEK 60
Query: 737 PPKFYPAEDVKKPLANRRKAKPTKLRSSITPGTVLIILAGRFKGKRVVFLKQLPSGLLLV 558
P KFYPAEDVKKPL NRRK KPTKL++SITPGTVLIILAGRFKGKRVVFLKQL SGLLLV
Sbjct: 61 PAKFYPAEDVKKPLVNRRKPKPTKLKASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLV 120
Query: 557 SGPFKINGVPLRRVNQSYVIGTSTKVDISGVSLDKFDDKYFGKVAEKKNKKGEGEFFEAE 378
+GPFKINGVPLRRVNQ+YVIGTSTK+DISGV+ +KFDDKYFGKVAEKK KK EGEFFEAE
Sbjct: 121 TGPFKINGVPLRRVNQAYVIGTSTKIDISGVNTEKFDDKYFGKVAEKKKKKTEGEFFEAE 180
Query: 377 KEEKKVFPQGKKDDQKAVDGALIKAIESVPELKTYLGARFSLKQGMKPHELVF* 216
KEEKK PQ KK+DQK VD ALIK+IE+VPELK YLGARFSL QGMKPHELVF*
Sbjct: 181 KEEKKEIPQEKKEDQKTVDAALIKSIEAVPELKVYLGARFSLSQGMKPHELVF* 234
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,838,762,477
Number of Sequences: 33410
Number of Extensions: 5838762477
Number of Successful Extensions: 216125919
Number of sequences better than 0.0: 0
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