BLASTX 7.6.2
Query= UN10596 /QuerySize=786
(785 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G38430.1 | Symbols: | ribulose bisphosphate c... 356 1e-098
TAIR9_protein||AT5G38410.1 | Symbols: | ribulose bisphosphate c... 355 2e-098
TAIR9_protein||AT5G38420.1 | Symbols: | ribulose bisphosphate c... 351 4e-097
TAIR9_protein||AT5G38410.3 | Symbols: | ribulose bisphosphate c... 349 1e-096
TAIR9_protein||AT1G67090.1 | Symbols: RBCS1A | RBCS1A (RIBULOSE ... 346 1e-095
TAIR9_protein||AT5G38410.2 | Symbols: | ribulose bisphosphate c... 332 1e-091
TAIR9_protein||AT1G67090.2 | Symbols: RBCS1A | RBCS1A (RIBULOSE ... 178 4e-045
>TAIR9_protein||AT5G38430.1 | Symbols: | ribulose bisphosphate carboxylase
small chain 1B / RuBisCO small subunit 1B (RBCS-1B) (ATS1B) |
chr5:15384350-15385155 REVERSE
Length = 182
Score = 356 bits (912), Expect = 1e-098
Identities = 168/182 (92%), Positives = 172/182 (94%)
Frame = +3
Query: 72 MASSMLSSAAVATSPAQATMVAPFTGLKSSATFPVTRKTNTDITSIVSNGGRVNCMKVWP 251
MASSMLSSAAV TSPAQATMVAPFTGLKSSA+FPVTRK N DITSI SNGGRV+CMKVWP
Sbjct: 1 MASSMLSSAAVVTSPAQATMVAPFTGLKSSASFPVTRKANNDITSITSNGGRVSCMKVWP 60
Query: 252 PLGKKKFETLSYLPDLTDVELGKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGR 431
P+GKKKFETLSYLPDLTDVEL KEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGR
Sbjct: 61 PIGKKKFETLSYLPDLTDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGR 120
Query: 432 YWTMWKLPLFGCTDSAQVLKEVQECKNEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFTG 611
YWTMWKLPLFGCTDSAQVLKEV+ECK EYP AFIRIIGFDN RQVQCISFIAYKPPSFT
Sbjct: 121 YWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPPSFTD 180
Query: 612 A* 617
A*
Sbjct: 181 A* 182
>TAIR9_protein||AT5G38410.1 | Symbols: | ribulose bisphosphate carboxylase
small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B) |
chr5:15377501-15378306 REVERSE
Length = 182
Score = 355 bits (910), Expect = 2e-098
Identities = 168/182 (92%), Positives = 172/182 (94%)
Frame = +3
Query: 72 MASSMLSSAAVATSPAQATMVAPFTGLKSSATFPVTRKTNTDITSIVSNGGRVNCMKVWP 251
MASSMLSSAAV TSPAQATMVAPFTGLKSSA FPVTRKTN DITSI SNGGRV+CMKVWP
Sbjct: 1 MASSMLSSAAVVTSPAQATMVAPFTGLKSSAAFPVTRKTNKDITSIASNGGRVSCMKVWP 60
Query: 252 PLGKKKFETLSYLPDLTDVELGKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGR 431
P+GKKKFETLSYLPDL+DVEL KEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGR
Sbjct: 61 PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGR 120
Query: 432 YWTMWKLPLFGCTDSAQVLKEVQECKNEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFTG 611
YWTMWKLPLFGCTDSAQVLKEV+ECK EYP AFIRIIGFDN RQVQCISFIAYKPPSFT
Sbjct: 121 YWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPPSFTE 180
Query: 612 A* 617
A*
Sbjct: 181 A* 182
>TAIR9_protein||AT5G38420.1 | Symbols: | ribulose bisphosphate carboxylase
small chain 2B / RuBisCO small subunit 2B (RBCS-2B) (ATS2B) |
chr5:15381203-15381978 REVERSE
Length = 182
Score = 351 bits (899), Expect = 4e-097
Identities = 165/182 (90%), Positives = 170/182 (93%)
Frame = +3
Query: 72 MASSMLSSAAVATSPAQATMVAPFTGLKSSATFPVTRKTNTDITSIVSNGGRVNCMKVWP 251
MASSM SS AV TSPAQATMVAPFTGLKSSA+FPVTRK N DITSI SNGGRV+CMKVWP
Sbjct: 1 MASSMFSSTAVVTSPAQATMVAPFTGLKSSASFPVTRKANNDITSITSNGGRVSCMKVWP 60
Query: 252 PLGKKKFETLSYLPDLTDVELGKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGR 431
P+GKKKFETLSYLPDL+DVEL KEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGR
Sbjct: 61 PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGR 120
Query: 432 YWTMWKLPLFGCTDSAQVLKEVQECKNEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFTG 611
YWTMWKLPLFGCTDSAQVLKEV+ECK EYP AFIRIIGFDN RQVQCISFIAYKPPSFT
Sbjct: 121 YWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPPSFTE 180
Query: 612 A* 617
A*
Sbjct: 181 A* 182
>TAIR9_protein||AT5G38410.3 | Symbols: | ribulose bisphosphate carboxylase
small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B) |
chr5:15377501-15378306 REVERSE
Length = 187
Score = 349 bits (894), Expect = 1e-096
Identities = 168/187 (89%), Positives = 172/187 (91%), Gaps = 5/187 (2%)
Frame = +3
Query: 72 MASSMLSSAAVATSPAQATMVAPFTGLKSSATFPVTRKTNTDITSIVSNGGRVNCMKVWP 251
MASSMLSSAAV TSPAQATMVAPFTGLKSSA FPVTRKTN DITSI SNGGRV+CMKVWP
Sbjct: 1 MASSMLSSAAVVTSPAQATMVAPFTGLKSSAAFPVTRKTNKDITSIASNGGRVSCMKVWP 60
Query: 252 PLGKKKFETLSYLPDLTDVELGKEVDYLLRNKWIPCVEFELE-----HGFVYREHGNTPG 416
P+GKKKFETLSYLPDL+DVEL KEVDYLLRNKWIPCVEFELE HGFVYREHGNTPG
Sbjct: 61 PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEVINTKHGFVYREHGNTPG 120
Query: 417 YYDGRYWTMWKLPLFGCTDSAQVLKEVQECKNEYPNAFIRIIGFDNNRQVQCISFIAYKP 596
YYDGRYWTMWKLPLFGCTDSAQVLKEV+ECK EYP AFIRIIGFDN RQVQCISFIAYKP
Sbjct: 121 YYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKP 180
Query: 597 PSFTGA* 617
PSFT A*
Sbjct: 181 PSFTEA* 187
>TAIR9_protein||AT1G67090.1 | Symbols: RBCS1A | RBCS1A (RIBULOSE BISPHOSPHATE
CARBOXYLASE SMALL CHAIN 1A); copper ion binding / ribulose-bisphosphate
carboxylase | chr1:25048465-25049249 REVERSE
Length = 181
Score = 346 bits (887), Expect = 1e-095
Identities = 161/180 (89%), Positives = 167/180 (92%)
Frame = +3
Query: 72 MASSMLSSAAVATSPAQATMVAPFTGLKSSATFPVTRKTNTDITSIVSNGGRVNCMKVWP 251
MASSMLSSA + SPAQATMVAPF GLKSSA FP TRK N DITSI SNGGRVNCM+VWP
Sbjct: 1 MASSMLSSATMVASPAQATMVAPFNGLKSSAAFPATRKANNDITSITSNGGRVNCMQVWP 60
Query: 252 PLGKKKFETLSYLPDLTDVELGKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGR 431
P+GKKKFETLSYLPDLTD EL KEVDYL+RNKWIPCVEFELEHGFVYREHGN+PGYYDGR
Sbjct: 61 PIGKKKFETLSYLPDLTDSELAKEVDYLIRNKWIPCVEFELEHGFVYREHGNSPGYYDGR 120
Query: 432 YWTMWKLPLFGCTDSAQVLKEVQECKNEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFTG 611
YWTMWKLPLFGCTDSAQVLKEV+ECK EYPNAFIRIIGFDN RQVQCISFIAYKPPSFTG
Sbjct: 121 YWTMWKLPLFGCTDSAQVLKEVEECKKEYPNAFIRIIGFDNTRQVQCISFIAYKPPSFTG 180
>TAIR9_protein||AT5G38410.2 | Symbols: | ribulose bisphosphate carboxylase
small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B) |
chr5:15377501-15378306 REVERSE
Length = 175
Score = 332 bits (851), Expect = 1e-091
Identities = 161/182 (88%), Positives = 165/182 (90%), Gaps = 7/182 (3%)
Frame = +3
Query: 72 MASSMLSSAAVATSPAQATMVAPFTGLKSSATFPVTRKTNTDITSIVSNGGRVNCMKVWP 251
MASSMLSSAAV TSPAQATMVAPFTGLKSSA FPVTRKTN DITSI SNGGRV+CMKVWP
Sbjct: 1 MASSMLSSAAVVTSPAQATMVAPFTGLKSSAAFPVTRKTNKDITSIASNGGRVSCMKVWP 60
Query: 252 PLGKKKFETLSYLPDLTDVELGKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGR 431
P+GKKKFETLSYLPDL+DVEL KEVDYLLRNKWIPCVEFEL EHGNTPGYYDGR
Sbjct: 61 PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFEL-------EHGNTPGYYDGR 113
Query: 432 YWTMWKLPLFGCTDSAQVLKEVQECKNEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFTG 611
YWTMWKLPLFGCTDSAQVLKEV+ECK EYP AFIRIIGFDN RQVQCISFIAYKPPSFT
Sbjct: 114 YWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPPSFTE 173
Query: 612 A* 617
A*
Sbjct: 174 A* 175
>TAIR9_protein||AT1G67090.2 | Symbols: RBCS1A | RBCS1A (RIBULOSE BISPHOSPHATE
CARBOXYLASE SMALL CHAIN 1A); copper ion binding / ribulose-bisphosphate
carboxylase | chr1:25048590-25049249 REVERSE
Length = 137
Score = 178 bits (450), Expect = 4e-045
Identities = 84/102 (82%), Positives = 90/102 (88%)
Frame = +3
Query: 72 MASSMLSSAAVATSPAQATMVAPFTGLKSSATFPVTRKTNTDITSIVSNGGRVNCMKVWP 251
MASSMLSSA + SPAQATMVAPF GLKSSA FP TRK N DITSI SNGGRVNCM+VWP
Sbjct: 1 MASSMLSSATMVASPAQATMVAPFNGLKSSAAFPATRKANNDITSITSNGGRVNCMQVWP 60
Query: 252 PLGKKKFETLSYLPDLTDVELGKEVDYLLRNKWIPCVEFELE 377
P+GKKKFETLSYLPDLTD EL KEVDYL+RNKWIPCVEF+ +
Sbjct: 61 PIGKKKFETLSYLPDLTDSELAKEVDYLIRNKWIPCVEFDTD 102
Score = 52 bits (124), Expect = 3e-007
Identities = 26/41 (63%), Positives = 28/41 (68%)
Frame = +1
Query: 367 LSWSMDLYTVSTETHPDIMMDVTGQCGSSPYSDALTLLKC* 489
+ + DL TVST THPD MMD TGQCGS P S A T LKC*
Sbjct: 97 VEFDTDLCTVSTVTHPDTMMDGTGQCGSFPCSVAPTPLKC* 137
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,838,762,477
Number of Sequences: 33410
Number of Extensions: 5838762477
Number of Successful Extensions: 216125919
Number of sequences better than 0.0: 0
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