BLASTX 7.6.2
Query= UN10607 /QuerySize=1735
(1734 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G13930.1 | Symbols: SHM4 | SHM4 (serine hydrox... 902 2e-262
TAIR9_protein||AT4G13890.1 | Symbols: SHM5, EDA36, EDA37 | EDA36... 788 4e-228
TAIR9_protein||AT1G36370.1 | Symbols: SHM7 | SHM7 (serine hydrox... 629 3e-180
TAIR9_protein||AT1G22020.1 | Symbols: SHM6 | SHM6 (serine hydrox... 601 5e-172
TAIR9_protein||AT4G32520.1 | Symbols: SHM3 | SHM3 (SERINE HYDROX... 549 3e-156
TAIR9_protein||AT4G32520.2 | Symbols: SHM3 | SHM3 (SERINE HYDROX... 549 3e-156
TAIR9_protein||AT4G37930.1 | Symbols: SHM1, STM, SHMT1 | SHM1 (S... 548 6e-156
TAIR9_protein||AT5G26780.1 | Symbols: SHM2 | SHM2 (SERINE HYDROX... 530 1e-150
TAIR9_protein||AT5G26780.3 | Symbols: SHM2 | SHM2 (SERINE HYDROX... 410 2e-114
TAIR9_protein||AT5G26780.2 | Symbols: SHM2 | SHM2 (SERINE HYDROX... 410 2e-114
>TAIR9_protein||AT4G13930.1 | Symbols: SHM4 | SHM4 (serine
hydroxymethyltransferase 4); catalytic/ glycine
hydroxymethyltransferase/ pyridoxal phosphate binding |
chr4:8048013-8050021 REVERSE
Length = 472
Score = 902 bits (2329), Expect = 2e-262
Identities = 439/470 (93%), Positives = 455/470 (96%)
Frame = -3
Query: 1708 MDPVSAWGNTPLVTVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 1529
M+PVS+WGNT LV+VDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS
Sbjct: 1 MEPVSSWGNTSLVSVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 60
Query: 1528 EGMPGNRYYGGNEFIDLIENLCRSRALEAFRLDSASWGVNVQPYSGSPANFAAYTALLQP 1349
EG+PGNRYYGGNEFID IENLCRSRALEAF D A+WGVNVQPYSGSPANFAAYTALLQP
Sbjct: 61 EGIPGNRYYGGNEFIDEIENLCRSRALEAFHCDPAAWGVNVQPYSGSPANFAAYTALLQP 120
Query: 1348 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNFTTGYIDYDKLEEKAMDF 1169
HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNFTTGYIDYDKLEEKA+DF
Sbjct: 121 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNFTTGYIDYDKLEEKALDF 180
Query: 1168 RPKLLICGGSAYPRDWDYARLRAVADKVGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 989
RPKLLICGGSAYPRDWDYAR RA+ADKVGALLLCDMAHISGLVAAQEAANPFEYCDVVTT
Sbjct: 181 RPKLLICGGSAYPRDWDYARFRAIADKVGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 240
Query: 988 TTHKSLRGPRAGMIFYRKGPKPPKKGQAEGAVYDFEDKINFAVFPALQGGPHNHQIGALA 809
TTHKSLRGPRAGMIFYRKGPKPPKKGQ EGAVYDFEDKINFAVFPALQGGPHNHQIGALA
Sbjct: 241 TTHKSLRGPRAGMIFYRKGPKPPKKGQPEGAVYDFEDKINFAVFPALQGGPHNHQIGALA 300
Query: 808 VALKQANTPGFKVYAKQVKANAVALANYLMGKGYSIVTGGTENHLVLWDLRPLGLTGNKV 629
VALKQANTPGFKVYAKQVKANAVAL NYLM KGY IVT GTENHLVLWDLRPLGLTGNKV
Sbjct: 301 VALKQANTPGFKVYAKQVKANAVALGNYLMSKGYQIVTNGTENHLVLWDLRPLGLTGNKV 360
Query: 628 EKLCDLCDITLNKNAVFGDSSALAPGGVRIGTPAMTSRGLVEKDFEMIGEFLSRSVTLTL 449
EKLCDLC ITLNKNAVFGDSSALAPGGVRIG PAMTSRGLVEKDFE IGEFLSR+VTLTL
Sbjct: 361 EKLCDLCSITLNKNAVFGDSSALAPGGVRIGAPAMTSRGLVEKDFEQIGEFLSRAVTLTL 420
Query: 448 NIQKEHGKLLKDFNKGLVNNKEIEELKADVEKFAASYEMPGFLMSEMKYQ 299
+IQK +GKLLKDFNKGLVNNK++++LKADVEKF+ASYEMPGFLMSEMKY+
Sbjct: 421 DIQKTYGKLLKDFNKGLVNNKDLDQLKADVEKFSASYEMPGFLMSEMKYK 470
>TAIR9_protein||AT4G13890.1 | Symbols: SHM5, EDA36, EDA37 | EDA36 (EMBRYO SAC
DEVELOPMENT ARREST 37); catalytic/ glycine hydroxymethyltransferase/
pyridoxal phosphate binding | chr4:8032146-8033718 REVERSE
Length = 471
Score = 788 bits (2033), Expect = 4e-228
Identities = 378/468 (80%), Positives = 424/468 (90%)
Frame = -3
Query: 1708 MDPVSAWGNTPLVTVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYS 1529
M+PV +WGNT L VDPEI+DLIEKEK RQCRGIELIA+ENFTS AV+EALGS LTNKYS
Sbjct: 1 MEPVYSWGNTHLDFVDPEIYDLIEKEKHRQCRGIELIAAENFTSVAVMEALGSCLTNKYS 60
Query: 1528 EGMPGNRYYGGNEFIDLIENLCRSRALEAFRLDSASWGVNVQPYSGSPANFAAYTALLQP 1349
EGMPGNRYYGG EFID IE+LCRSR+LEAF + WGVNVQPYSGSPANFAAYTALLQP
Sbjct: 61 EGMPGNRYYGGTEFIDEIESLCRSRSLEAFHCNPEKWGVNVQPYSGSPANFAAYTALLQP 120
Query: 1348 HDRIMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNFTTGYIDYDKLEEKAMDF 1169
HDRIMGLDLPSGGH+THGYY+SGGK ISATSIYFE+LPYKV+ TGYIDYDKLEEKAMDF
Sbjct: 121 HDRIMGLDLPSGGHITHGYYSSGGKNISATSIYFENLPYKVDSKTGYIDYDKLEEKAMDF 180
Query: 1168 RPKLLICGGSAYPRDWDYARLRAVADKVGALLLCDMAHISGLVAAQEAANPFEYCDVVTT 989
RPKL+ICGG++YPR+WDYAR RAVADKVGA LLCDMAH S LVAAQEAA+PFEYCDVVTT
Sbjct: 181 RPKLIICGGTSYPREWDYARFRAVADKVGAFLLCDMAHNSALVAAQEAADPFEYCDVVTT 240
Query: 988 TTHKSLRGPRAGMIFYRKGPKPPKKGQAEGAVYDFEDKINFAVFPALQGGPHNHQIGALA 809
+THKSLRGPRAGMIFYRKGPKP KKGQ EG VYDF+ KIN AVFPALQ GPHN++IGALA
Sbjct: 241 STHKSLRGPRAGMIFYRKGPKPAKKGQPEGEVYDFDAKINSAVFPALQSGPHNNKIGALA 300
Query: 808 VALKQANTPGFKVYAKQVKANAVALANYLMGKGYSIVTGGTENHLVLWDLRPLGLTGNKV 629
VALKQ P FKVYAKQVKANA LA+YL+ KGY++VT GT+NHL+LWDLRPLGLTGNKV
Sbjct: 301 VALKQVMAPSFKVYAKQVKANAACLASYLINKGYTLVTDGTDNHLILWDLRPLGLTGNKV 360
Query: 628 EKLCDLCDITLNKNAVFGDSSALAPGGVRIGTPAMTSRGLVEKDFEMIGEFLSRSVTLTL 449
EK+C+LC ITLN+NAVFGD+S LAPGGVRIGTPAMTSRGLVEKDFE IGEFL R+VT+TL
Sbjct: 361 EKVCELCYITLNRNAVFGDTSFLAPGGVRIGTPAMTSRGLVEKDFEKIGEFLHRAVTITL 420
Query: 448 NIQKEHGKLLKDFNKGLVNNKEIEELKADVEKFAASYEMPGFLMSEMK 305
+IQ+++GK++KDFNKGLVNNKEI+E+KADVE+F ++MPGF +SE +
Sbjct: 421 DIQEQYGKVMKDFNKGLVNNKEIDEIKADVEEFTYDFDMPGFFISESR 468
>TAIR9_protein||AT1G36370.1 | Symbols: SHM7 | SHM7 (serine
hydroxymethyltransferase 7); catalytic/ glycine
hydroxymethyltransferase/ pyridoxal phosphate binding |
chr1:13696240-13698576 REVERSE
Length = 599
Score = 629 bits (1620), Expect = 3e-180
Identities = 301/466 (64%), Positives = 368/466 (78%), Gaps = 5/466 (1%)
Frame = -3
Query: 1699 VSAWGNTPLVTVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGM 1520
V AWG+ P+ DP+IH+L+EKEK+RQ RGIELIASENF AV+EALGS LTNKYSEGM
Sbjct: 130 VRAWGDQPIHLADPDIHELMEKEKQRQVRGIELIASENFVCRAVMEALGSHLTNKYSEGM 189
Query: 1519 PGNRYYGGNEFIDLIENLCRSRALEAFRLDSASWGVNVQPYSGSPANFAAYTALLQPHDR 1340
PG RYY GN++ID IENLC RAL AF L+S WGVNVQPYS + ANFA YT LL P +R
Sbjct: 190 PGARYYTGNQYIDQIENLCIERALTAFGLESDKWGVNVQPYSCTSANFAVYTGLLLPGER 249
Query: 1339 IMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNFTTGYIDYDKLEEKAMDFRPK 1160
IMGLD PSGGH++HGY T GGKKISA SI+FES PYKVN TGYIDYDKLE+KA+D+RPK
Sbjct: 250 IMGLDSPSGGHMSHGYCTPGGKKISAASIFFESFPYKVNPQTGYIDYDKLEDKALDYRPK 309
Query: 1159 LLICGGSAYPRDWDYARLRAVADKVGALLLCDMAHISGLVAAQEAANPFEYCDVVTTTTH 980
+LICGGS+YPRDWD+AR+R +ADK GA+L+CDMAHISGLVA +E +NPF++CD+VT+TTH
Sbjct: 310 ILICGGSSYPRDWDFARVRQIADKCGAVLMCDMAHISGLVATKECSNPFDHCDIVTSTTH 369
Query: 979 KSLRGPRAGMIFYRKGPKPPKKGQAE-----GAVYDFEDKINFAVFPALQGGPHNHQIGA 815
K LRGPR G+IFYR+GPK K+G YD E+KINFAVFP+LQGGPHN+ I A
Sbjct: 370 KGLRGPRGGIIFYRRGPKIRKQGHHSSHCDTSTHYDLEEKINFAVFPSLQGGPHNNHIAA 429
Query: 814 LAVALKQANTPGFKVYAKQVKANAVALANYLMGKGYSIVTGGTENHLVLWDLRPLGLTGN 635
LA+ALKQ TP +K Y +Q+K NA ALA L+ + +VTGGT+NHL+LWDL P+GLTG
Sbjct: 430 LAIALKQVATPEYKAYIQQMKKNAQALAAALLRRKCRLVTGGTDNHLLLWDLTPMGLTGK 489
Query: 634 KVEKLCDLCDITLNKNAVFGDSSALAPGGVRIGTPAMTSRGLVEKDFEMIGEFLSRSVTL 455
EK+C++C ITLNK A+FGD+ ++PGGVRIGTPAMT+RG +E DFE + +FL ++ +
Sbjct: 490 VYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTTRGCIESDFETMADFLIKAAQI 549
Query: 454 TLNIQKEHGKLLKDFNKGLVNNKEIEELKADVEKFAASYEMPGFLM 317
T +Q+EHGK K+F K L NK+I EL+ VE FA YEMP L+
Sbjct: 550 TSALQREHGKSHKEFVKSLCTNKDIAELRNRVEAFALQYEMPASLI 595
>TAIR9_protein||AT1G22020.1 | Symbols: SHM6 | SHM6 (serine
hydroxymethyltransferase 6); catalytic/ glycine
hydroxymethyltransferase/ pyridoxal phosphate binding |
chr1:7754599-7757087 FORWARD
Length = 600
Score = 601 bits (1549), Expect = 5e-172
Identities = 289/466 (62%), Positives = 364/466 (78%), Gaps = 5/466 (1%)
Frame = -3
Query: 1699 VSAWGNTPLVTVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGM 1520
V AWGN + DPEIH+ +EKEK+RQ RGIELIASENF AV+EALGS LTNKYSEGM
Sbjct: 134 VRAWGNQSIEEADPEIHEFMEKEKQRQFRGIELIASENFVCRAVMEALGSHLTNKYSEGM 193
Query: 1519 PGNRYYGGNEFIDLIENLCRSRALEAFRLDSASWGVNVQPYSGSPANFAAYTALLQPHDR 1340
PG RYY GN++ID IE LC+ RAL AF L+ WGVNVQPYS + ANFA +T LL P +R
Sbjct: 194 PGARYYTGNQYIDQIEILCQERALAAFGLNHEKWGVNVQPYSCTSANFAVFTGLLMPGER 253
Query: 1339 IMGLDLPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNFTTGYIDYDKLEEKAMDFRPK 1160
IMGLD PSGGH++HGYYT GGKK+S SI+FES PYKV+ TGYIDYDKLEEKA+D+RPK
Sbjct: 254 IMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESFPYKVDPRTGYIDYDKLEEKALDYRPK 313
Query: 1159 LLICGGSAYPRDWDYARLRAVADKVGALLLCDMAHISGLVAAQEAANPFEYCDVVTTTTH 980
+LICGGS+YPRDW++ R R +ADK GA+L+ DMA ISGLVAA+E+ NPF+YCD+VT+TTH
Sbjct: 314 ILICGGSSYPRDWEFPRFRHIADKCGAVLMFDMAQISGLVAAKESPNPFDYCDIVTSTTH 373
Query: 979 KSLRGPRAGMIFYRKGPKPPKK----GQAEGAV-YDFEDKINFAVFPALQGGPHNHQIGA 815
KSLRGPR G+IFY++G KP K+ E + YDFE+KINF+VFP+LQGGPHN+ I A
Sbjct: 374 KSLRGPRGGIIFYKRGLKPKKQSINLNHCESNIQYDFEEKINFSVFPSLQGGPHNNHIAA 433
Query: 814 LAVALKQANTPGFKVYAKQVKANAVALANYLMGKGYSIVTGGTENHLVLWDLRPLGLTGN 635
LA+ALKQA +P +K+Y +QVK NA ALA+ L+ + ++TGGT+NHL+LWDL PLGLTG
Sbjct: 434 LAIALKQAASPEYKLYMRQVKKNAKALASALISRKCKLITGGTDNHLLLWDLTPLGLTGK 493
Query: 634 KVEKLCDLCDITLNKNAVFGDSSALAPGGVRIGTPAMTSRGLVEKDFEMIGEFLSRSVTL 455
EK+C++C IT+NK A+F ++ ++PGGVRIG+PAMTSRG +E +FE + +FL R+ +
Sbjct: 494 VYEKVCEMCHITVNKVAIFSENGVISPGGVRIGSPAMTSRGCLEPEFETMADFLYRAAQI 553
Query: 454 TLNIQKEHGKLLKDFNKGLVNNKEIEELKADVEKFAASYEMPGFLM 317
Q+EHGKL K+ K + + KEI +L+ VE FA + MP F M
Sbjct: 554 ASAAQREHGKLQKEPLKSIYHCKEIADLRNQVEAFATQFAMPAFDM 599
>TAIR9_protein||AT4G32520.1 | Symbols: SHM3 | SHM3 (SERINE
HYDROXYMETHYLTRANSFERASE 3); catalytic/ glycine
hydroxymethyltransferase/ pyridoxal phosphate binding |
chr4:15689642-15692334 REVERSE
Length = 530
Score = 549 bits (1413), Expect = 3e-156
Identities = 274/453 (60%), Positives = 341/453 (75%), Gaps = 16/453 (3%)
Frame = -3
Query: 1666 VDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEF 1487
VDPE+ +I KEK RQ R +ELIASENFTS AV+EA+GS LTNKYSEG+PG RYYGGNE+
Sbjct: 86 VDPEVRTIITKEKDRQFRSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEY 145
Query: 1486 IDLIENLCRSRALEAFRLDSASWGVNVQPYSGSPANFAAYTALLQPHDRIMGLDLPSGGH 1307
ID +E LC++RAL AFRLDS WGVNVQP SGSPANFA YTA+L PHDRIMGLDLP GGH
Sbjct: 146 IDQLETLCQNRALAAFRLDSTKWGVNVQPLSGSPANFAVYTAILSPHDRIMGLDLPHGGH 205
Query: 1306 LTHGYYTSGGKKISATSIYFESLPYKVNFTTGYIDYDKLEEKAMDFRPKLLICGGSAYPR 1127
L+HG+ T+ +++S TSIYFES+PY+++ +TG +DYD LE+ A FRPKL+I G SAY R
Sbjct: 206 LSHGFMTA-KRRVSGTSIYFESMPYRLDESTGIVDYDMLEKTATLFRPKLIIAGASAYSR 264
Query: 1126 DWDYARLRAVADKVGALLLCDMAHISGLVAAQEAANPFEYCDVVTTTTHKSLRGPRAGMI 947
D+DY R+R +AD VGA L+ DMAHISGLVAA A+PFEYCD+VTTTTHKSLRGPR GMI
Sbjct: 265 DFDYPRMRKIADSVGAFLMMDMAHISGLVAASVVADPFEYCDIVTTTTHKSLRGPRGGMI 324
Query: 946 FYRKGPKPPKKGQAEGAVYDFEDKINFAVFPALQGGPHNHQIGALAVALKQANTPGFKVY 767
F+RK P G D E +N AVFP LQGGPHNH IG LAV LK A +P FK Y
Sbjct: 325 FFRKDP-------INGV--DLESAVNNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKAY 375
Query: 766 AKQVKANAVALANYLMGKGYSIVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCDITLNKN 587
K+V +N ALAN L+ G+ +V+GG++NHLVL DLRP+G+ G +VEK+ D+ ITLNKN
Sbjct: 376 QKRVVSNCRALANRLVELGFKLVSGGSDNHLVLVDLRPMGMDGARVEKILDMASITLNKN 435
Query: 586 AVFGDSSALAPGGVRIGTPAMTSRGLVEKDFEMIGEFLSRSVTLTLNIQK-EHGKLLKDF 410
+V GD SAL PGG+RIG+PAMT+RGL EKDF ++ +F+ V +T+ +K G L+DF
Sbjct: 436 SVPGDKSALVPGGIRIGSPAMTTRGLSEKDFVVVADFIKEGVEITMEAKKAAPGSKLQDF 495
Query: 409 NKGLVN-----NKEIEELKADVEKFAASYEMPG 326
NK + + + ++ LK VE F + + +PG
Sbjct: 496 NKFVTSPEFPLKERVKSLKERVETFTSRFPIPG 528
>TAIR9_protein||AT4G32520.2 | Symbols: SHM3 | SHM3 (SERINE
HYDROXYMETHYLTRANSFERASE 3); catalytic/ glycine
hydroxymethyltransferase/ pyridoxal phosphate binding |
chr4:15689642-15692334 REVERSE
Length = 530
Score = 549 bits (1413), Expect = 3e-156
Identities = 274/453 (60%), Positives = 341/453 (75%), Gaps = 16/453 (3%)
Frame = -3
Query: 1666 VDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRYYGGNEF 1487
VDPE+ +I KEK RQ R +ELIASENFTS AV+EA+GS LTNKYSEG+PG RYYGGNE+
Sbjct: 86 VDPEVRTIITKEKDRQFRSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEY 145
Query: 1486 IDLIENLCRSRALEAFRLDSASWGVNVQPYSGSPANFAAYTALLQPHDRIMGLDLPSGGH 1307
ID +E LC++RAL AFRLDS WGVNVQP SGSPANFA YTA+L PHDRIMGLDLP GGH
Sbjct: 146 IDQLETLCQNRALAAFRLDSTKWGVNVQPLSGSPANFAVYTAILSPHDRIMGLDLPHGGH 205
Query: 1306 LTHGYYTSGGKKISATSIYFESLPYKVNFTTGYIDYDKLEEKAMDFRPKLLICGGSAYPR 1127
L+HG+ T+ +++S TSIYFES+PY+++ +TG +DYD LE+ A FRPKL+I G SAY R
Sbjct: 206 LSHGFMTA-KRRVSGTSIYFESMPYRLDESTGIVDYDMLEKTATLFRPKLIIAGASAYSR 264
Query: 1126 DWDYARLRAVADKVGALLLCDMAHISGLVAAQEAANPFEYCDVVTTTTHKSLRGPRAGMI 947
D+DY R+R +AD VGA L+ DMAHISGLVAA A+PFEYCD+VTTTTHKSLRGPR GMI
Sbjct: 265 DFDYPRMRKIADSVGAFLMMDMAHISGLVAASVVADPFEYCDIVTTTTHKSLRGPRGGMI 324
Query: 946 FYRKGPKPPKKGQAEGAVYDFEDKINFAVFPALQGGPHNHQIGALAVALKQANTPGFKVY 767
F+RK P G D E +N AVFP LQGGPHNH IG LAV LK A +P FK Y
Sbjct: 325 FFRKDP-------INGV--DLESAVNNAVFPGLQGGPHNHTIGGLAVCLKHAQSPEFKAY 375
Query: 766 AKQVKANAVALANYLMGKGYSIVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCDITLNKN 587
K+V +N ALAN L+ G+ +V+GG++NHLVL DLRP+G+ G +VEK+ D+ ITLNKN
Sbjct: 376 QKRVVSNCRALANRLVELGFKLVSGGSDNHLVLVDLRPMGMDGARVEKILDMASITLNKN 435
Query: 586 AVFGDSSALAPGGVRIGTPAMTSRGLVEKDFEMIGEFLSRSVTLTLNIQK-EHGKLLKDF 410
+V GD SAL PGG+RIG+PAMT+RGL EKDF ++ +F+ V +T+ +K G L+DF
Sbjct: 436 SVPGDKSALVPGGIRIGSPAMTTRGLSEKDFVVVADFIKEGVEITMEAKKAAPGSKLQDF 495
Query: 409 NKGLVN-----NKEIEELKADVEKFAASYEMPG 326
NK + + + ++ LK VE F + + +PG
Sbjct: 496 NKFVTSPEFPLKERVKSLKERVETFTSRFPIPG 528
>TAIR9_protein||AT4G37930.1 | Symbols: SHM1, STM, SHMT1 | SHM1 (SERINE
TRANSHYDROXYMETHYLTRANSFERASE 1); glycine hydroxymethyltransferase/
poly(U) binding | chr4:17831891-17834742 REVERSE
Length = 518
Score = 548 bits (1410), Expect = 6e-156
Identities = 275/469 (58%), Positives = 348/469 (74%), Gaps = 7/469 (1%)
Frame = -3
Query: 1684 NTPLVTVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRY 1505
N PL VDPEI D+IE EK RQ +G+ELI SENFTS +V++A+GS +TNKYSEG PG RY
Sbjct: 52 NAPLEEVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARY 111
Query: 1504 YGGNEFIDLIENLCRSRALEAFRLDSASWGVNVQPYSGSPANFAAYTALLQPHDRIMGLD 1325
YGGNE+ID+ E LC+ RALEAFRLD WGVNVQP SGSPANF YTALL+PH+RIM LD
Sbjct: 112 YGGNEYIDMAETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFHVYTALLKPHERIMALD 171
Query: 1324 LPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNFTTGYIDYDKLEEKAMDFRPKLLICG 1145
LP GGHL+HGY T KKISA SI+FE++PY+++ +TGYIDYD++E+ A FRPKL++ G
Sbjct: 172 LPHGGHLSHGYQTD-TKKISAVSIFFETMPYRLDESTGYIDYDQMEKSATLFRPKLIVAG 230
Query: 1144 GSAYPRDWDYARLRAVADKVGALLLCDMAHISGLVAAQEAANPFEYCDVVTTTTHKSLRG 965
SAY R +DYAR+R V +K A++L DMAHISGLVAA +PF+Y DVVTTTTHKSLRG
Sbjct: 231 ASAYARLYDYARIRKVCNKQKAVMLADMAHISGLVAANVIPSPFDYADVVTTTTHKSLRG 290
Query: 964 PRAGMIFYRKGPKPPKKGQAEGAVYDFEDKINFAVFPALQGGPHNHQIGALAVALKQANT 785
PR MIF+RKG K K Q + +YDFEDKIN AVFP LQGGPHNH I LAVALKQA T
Sbjct: 291 PRGAMIFFRKGVKEINK-QGKEVLYDFEDKINQAVFPGLQGGPHNHTITGLAVALKQATT 349
Query: 784 PGFKVYAKQVKANAVALANYLMGKGYSIVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCD 605
+K Y +QV +N+ A LM +GY +V+GGT+NHLVL +L+P G+ G++VEK+ +
Sbjct: 350 SEYKAYQEQVLSNSAKFAQTLMERGYELVSGGTDNHLVLVNLKPKGIDGSRVEKVLEAVH 409
Query: 604 ITLNKNAVFGDSSALAPGGVRIGTPAMTSRGLVEKDFEMIGEFLSRSVTLTLNIQKE-HG 428
I NKN V GD SA+ PGG+R+GTPA+TSRG VE+DF + E+ ++VT+ L ++ E G
Sbjct: 410 IASNKNTVPGDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAEYFDKAVTIALKVKSEAQG 469
Query: 427 KLLKDFNKGLVNN----KEIEELKADVEKFAASYEMPGFLMSEMKYQH* 293
LKDF + ++ EI +L+ +VE+FA + GF MKY++*
Sbjct: 470 TKLKDFVSAMESSSTIQSEIAKLRHEVEEFAKQFPTIGFEKETMKYKN* 518
>TAIR9_protein||AT5G26780.1 | Symbols: SHM2 | SHM2 (SERINE
HYDROXYMETHYLTRANSFERASE 2); catalytic/ glycine
hydroxymethyltransferase/ pyridoxal phosphate binding |
chr5:9418299-9421725 FORWARD
Length = 518
Score = 530 bits (1364), Expect = 1e-150
Identities = 268/469 (57%), Positives = 341/469 (72%), Gaps = 7/469 (1%)
Frame = -3
Query: 1684 NTPLVTVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRY 1505
N L +DPE+ D+IE EK RQ +G ELI SENFTS +V++A+GS +TNKYSEG PG RY
Sbjct: 52 NASLDEIDPEVADIIELEKARQWKGFELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARY 111
Query: 1504 YGGNEFIDLIENLCRSRALEAFRLDSASWGVNVQPYSGSPANFAAYTALLQPHDRIMGLD 1325
YGGNE+ID+ E LC+ RALEAF+LD + WGVNVQ SGSPANF YTALL+PH+RIM LD
Sbjct: 112 YGGNEYIDMAETLCQKRALEAFQLDPSKWGVNVQSLSGSPANFQVYTALLKPHERIMALD 171
Query: 1324 LPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNFTTGYIDYDKLEEKAMDFRPKLLICG 1145
LP GGHL+HGY T KKISA SI+FE++PY+++ TGYIDYD+LE+ A+ FRPKL++ G
Sbjct: 172 LPHGGHLSHGYQTD-TKKISAVSIFFETMPYRLDENTGYIDYDQLEKSAVLFRPKLIVAG 230
Query: 1144 GSAYPRDWDYARLRAVADKVGALLLCDMAHISGLVAAQEAANPFEYCDVVTTTTHKSLRG 965
SAY R +DYAR+R V +K A++L DMAHISGLVAA +PFEY DVVTTTTHKSLRG
Sbjct: 231 ASAYARLYDYARIRKVCNKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRG 290
Query: 964 PRAGMIFYRKGPKPPKKGQAEGAVYDFEDKINFAVFPALQGGPHNHQIGALAVALKQANT 785
PR MIF+RKG K K Q + +YD+ED+IN AVFP LQGGPHNH I LAVALKQA T
Sbjct: 291 PRGAMIFFRKGLKEINK-QGKEVMYDYEDRINQAVFPGLQGGPHNHTITGLAVALKQART 349
Query: 784 PGFKVYAKQVKANAVALANYLMGKGYSIVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCD 605
P +K Y QV N A L+ KGY +V+GGT+NHLVL +L+ G+ G++VEK+ +L
Sbjct: 350 PEYKAYQDQVLRNCSKFAETLLAKGYDLVSGGTDNHLVLVNLKNKGIDGSRVEKVLELVH 409
Query: 604 ITLNKNAVFGDSSALAPGGVRIGTPAMTSRGLVEKDFEMIGEFLSRSVTLTLNIQKE-HG 428
I NKN V GD SA+ PGG+R+GTPA+TSRG +E+DF + E+ +V + L I+ E G
Sbjct: 410 IAANKNTVPGDVSAMVPGGIRMGTPALTSRGFIEEDFAKVAEYFDLAVKIALKIKAESQG 469
Query: 427 KLLKDFNKGLVNNK----EIEELKADVEKFAASYEMPGFLMSEMKYQH* 293
LKDF + +N+ E+ +L+ VE++A + GF M+Y+ *
Sbjct: 470 TKLKDFVATMQSNEKLQSEMSKLREMVEEYAKQFPTIGFEKETMRYKE* 518
>TAIR9_protein||AT5G26780.3 | Symbols: SHM2 | SHM2 (SERINE
HYDROXYMETHYLTRANSFERASE 2); catalytic/ glycine
hydroxymethyltransferase/ pyridoxal phosphate binding |
chr5:9418299-9421725 FORWARD
Length = 534
Score = 410 bits (1052), Expect = 2e-114
Identities = 204/318 (64%), Positives = 244/318 (76%), Gaps = 2/318 (0%)
Frame = -3
Query: 1684 NTPLVTVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRY 1505
N L +DPE+ D+IE EK RQ +G ELI SENFTS +V++A+GS +TNKYSEG PG RY
Sbjct: 52 NASLDEIDPEVADIIELEKARQWKGFELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARY 111
Query: 1504 YGGNEFIDLIENLCRSRALEAFRLDSASWGVNVQPYSGSPANFAAYTALLQPHDRIMGLD 1325
YGGNE+ID+ E LC+ RALEAF+LD + WGVNVQ SGSPANF YTALL+PH+RIM LD
Sbjct: 112 YGGNEYIDMAETLCQKRALEAFQLDPSKWGVNVQSLSGSPANFQVYTALLKPHERIMALD 171
Query: 1324 LPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNFTTGYIDYDKLEEKAMDFRPKLLICG 1145
LP GGHL+HGY T KKISA SI+FE++PY+++ TGYIDYD+LE+ A+ FRPKL++ G
Sbjct: 172 LPHGGHLSHGYQTD-TKKISAVSIFFETMPYRLDENTGYIDYDQLEKSAVLFRPKLIVAG 230
Query: 1144 GSAYPRDWDYARLRAVADKVGALLLCDMAHISGLVAAQEAANPFEYCDVVTTTTHKSLRG 965
SAY R +DYAR+R V +K A++L DMAHISGLVAA +PFEY DVVTTTTHKSLRG
Sbjct: 231 ASAYARLYDYARIRKVCNKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRG 290
Query: 964 PRAGMIFYRKGPKPPKKGQAEGAVYDFEDKINFAVFPALQGGPHNHQIGALAVALKQANT 785
PR MIF+RKG K K Q + +YD+ED+IN AVFP LQGGPHNH I LAVALKQA T
Sbjct: 291 PRGAMIFFRKGLKEINK-QGKEVMYDYEDRINQAVFPGLQGGPHNHTITGLAVALKQART 349
Query: 784 PGFKVYAKQVKANAVALA 731
P +K Y QV N A
Sbjct: 350 PEYKAYQDQVLRNCSKFA 367
Score = 126 bits (314), Expect = 7e-029
Identities = 64/149 (42%), Positives = 97/149 (65%), Gaps = 5/149 (3%)
Frame = -3
Query: 724 LMGKGYSIVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCDITLNKNAVFGDSSALAPGGV 545
L+ KGY +V+GGT+NHLVL +L+ G+ G++VEK+ +L I NKN V GD SA+ PGG+
Sbjct: 386 LLAKGYDLVSGGTDNHLVLVNLKNKGIDGSRVEKVLELVHIAANKNTVPGDVSAMVPGGI 445
Query: 544 RIGTPAMTSRGLVEKDFEMIGEFLSRSVTLTLNIQKE-HGKLLKDFNKGLVNNK----EI 380
R+GTPA+TSRG +E+DF + E+ +V + L I+ E G LKDF + +N+ E+
Sbjct: 446 RMGTPALTSRGFIEEDFAKVAEYFDLAVKIALKIKAESQGTKLKDFVATMQSNEKLQSEM 505
Query: 379 EELKADVEKFAASYEMPGFLMSEMKYQH* 293
+L+ VE++A + GF M+Y+ *
Sbjct: 506 SKLREMVEEYAKQFPTIGFEKETMRYKE* 534
>TAIR9_protein||AT5G26780.2 | Symbols: SHM2 | SHM2 (SERINE
HYDROXYMETHYLTRANSFERASE 2); catalytic/ glycine
hydroxymethyltransferase/ pyridoxal phosphate binding |
chr5:9418299-9421725 FORWARD
Length = 534
Score = 410 bits (1052), Expect = 2e-114
Identities = 204/318 (64%), Positives = 244/318 (76%), Gaps = 2/318 (0%)
Frame = -3
Query: 1684 NTPLVTVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGMPGNRY 1505
N L +DPE+ D+IE EK RQ +G ELI SENFTS +V++A+GS +TNKYSEG PG RY
Sbjct: 52 NASLDEIDPEVADIIELEKARQWKGFELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARY 111
Query: 1504 YGGNEFIDLIENLCRSRALEAFRLDSASWGVNVQPYSGSPANFAAYTALLQPHDRIMGLD 1325
YGGNE+ID+ E LC+ RALEAF+LD + WGVNVQ SGSPANF YTALL+PH+RIM LD
Sbjct: 112 YGGNEYIDMAETLCQKRALEAFQLDPSKWGVNVQSLSGSPANFQVYTALLKPHERIMALD 171
Query: 1324 LPSGGHLTHGYYTSGGKKISATSIYFESLPYKVNFTTGYIDYDKLEEKAMDFRPKLLICG 1145
LP GGHL+HGY T KKISA SI+FE++PY+++ TGYIDYD+LE+ A+ FRPKL++ G
Sbjct: 172 LPHGGHLSHGYQTD-TKKISAVSIFFETMPYRLDENTGYIDYDQLEKSAVLFRPKLIVAG 230
Query: 1144 GSAYPRDWDYARLRAVADKVGALLLCDMAHISGLVAAQEAANPFEYCDVVTTTTHKSLRG 965
SAY R +DYAR+R V +K A++L DMAHISGLVAA +PFEY DVVTTTTHKSLRG
Sbjct: 231 ASAYARLYDYARIRKVCNKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRG 290
Query: 964 PRAGMIFYRKGPKPPKKGQAEGAVYDFEDKINFAVFPALQGGPHNHQIGALAVALKQANT 785
PR MIF+RKG K K Q + +YD+ED+IN AVFP LQGGPHNH I LAVALKQA T
Sbjct: 291 PRGAMIFFRKGLKEINK-QGKEVMYDYEDRINQAVFPGLQGGPHNHTITGLAVALKQART 349
Query: 784 PGFKVYAKQVKANAVALA 731
P +K Y QV N A
Sbjct: 350 PEYKAYQDQVLRNCSKFA 367
Score = 126 bits (314), Expect = 7e-029
Identities = 64/149 (42%), Positives = 97/149 (65%), Gaps = 5/149 (3%)
Frame = -3
Query: 724 LMGKGYSIVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCDITLNKNAVFGDSSALAPGGV 545
L+ KGY +V+GGT+NHLVL +L+ G+ G++VEK+ +L I NKN V GD SA+ PGG+
Sbjct: 386 LLAKGYDLVSGGTDNHLVLVNLKNKGIDGSRVEKVLELVHIAANKNTVPGDVSAMVPGGI 445
Query: 544 RIGTPAMTSRGLVEKDFEMIGEFLSRSVTLTLNIQKE-HGKLLKDFNKGLVNNK----EI 380
R+GTPA+TSRG +E+DF + E+ +V + L I+ E G LKDF + +N+ E+
Sbjct: 446 RMGTPALTSRGFIEEDFAKVAEYFDLAVKIALKIKAESQGTKLKDFVATMQSNEKLQSEM 505
Query: 379 EELKADVEKFAASYEMPGFLMSEMKYQH* 293
+L+ VE++A + GF M+Y+ *
Sbjct: 506 SKLREMVEEYAKQFPTIGFEKETMRYKE* 534
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,838,762,477
Number of Sequences: 33410
Number of Extensions: 5838762477
Number of Successful Extensions: 216125919
Number of sequences better than 0.0: 0
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