Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN10678


BLASTX 7.6.2

Query= UN10678 /QuerySize=666
        (665 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT5G28750.1 | Symbols:  | thylakoid assembly prot...    207   7e-054
TAIR9_protein||AT5G52440.1 | Symbols: HCF106 | HCF106; proton mo...     59   3e-009

>TAIR9_protein||AT5G28750.1 | Symbols:  | thylakoid assembly protein, putative |
        chr5:10784142-10785677 REVERSE

          Length = 148

 Score =  207 bits (525), Expect = 7e-054
 Identities = 124/152 (81%), Positives = 127/152 (83%), Gaps = 10/152 (6%)
 Frame = +3

Query:  54 MATSIATPLSSRPPASLP-LSSSRSSLFSNCFIATTQRRPKTRSLVA----IRPEQRRKA 218
           MATS+AT LSS PP SLP LSSSRSS FSNCF  TT  RP TRSLVA    IR E  RK 
Sbjct:   1 MATSVAT-LSSPPPVSLPLLSSSRSSFFSNCFTVTT--RPNTRSLVAIGRRIRQEPTRKP 57

Query: 219 LTCNALFGLGVPELAVIAGVAALLFGPKKLPEIGKSIGKTVKSFQQAAKEFESELKTEPE 398
           LTCNALFGLGVPELAVIAGVAALLFGPKKLPEIGKSIGKTVKSFQQAAKEFESELKTEPE
Sbjct:  58 LTCNALFGLGVPELAVIAGVAALLFGPKKLPEIGKSIGKTVKSFQQAAKEFESELKTEPE 117

Query: 399 DSVAGSSSPVAMSNKEEE-KTEVSSSSKDNA* 491
           +SVA  SS VA SNKEEE KTEVSSSSK+N *
Sbjct: 118 ESVA-ESSQVATSNKEEEKKTEVSSSSKENV* 148

>TAIR9_protein||AT5G52440.1 | Symbols: HCF106 | HCF106; proton motive force
        dependent protein transmembrane transporter | chr5:21286896-21288613
        FORWARD

          Length = 261

 Score =  59 bits (140), Expect = 3e-009
 Identities = 40/111 (36%), Positives = 59/111 (53%), Gaps = 16/111 (14%)
 Frame = +3

Query:  75 PLSSRPPASLP--------LSSSRSSLFSNCFIATTQRRPKTRSLVAIRPEQRRKA---L 221
           PL SR  AS P        L SSR S +           PK+ +     PE++R+    +
Sbjct:  27 PLQSRYKASKPNLSSWFSLLGSSRFSPYIGLKHLGISISPKSSN-----PEKKRRCKSMM 81

Query: 222 TCNALFGLGVPELAVIAGVAALLFGPKKLPEIGKSIGKTVKSFQQAAKEFE 374
              +LFG+G PE  VI  VA L+FGPK L E+ +++GKT+++FQ   +E +
Sbjct:  82 IRASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRTFQPTIRELQ 132

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,838,762,477
Number of Sequences: 33410
Number of Extensions: 5838762477
Number of Successful Extensions: 216125919
Number of sequences better than 0.0: 0