BLASTX 7.6.2
Query= UN10701 /QuerySize=1605
(1604 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|30696656|ref|NP_176402.2| Mitochondrial transcription termina... 314 4e-083
gi|15232683|ref|NP_190279.1| Mitochondrial transcription termina... 311 3e-082
gi|297837169|ref|XP_002886466.1| hypothetical protein ARALYDRAFT... 308 2e-081
gi|15220660|ref|NP_176387.1| Mitochondrial transcription termina... 307 5e-081
gi|26450011|dbj|BAC42126.1| unknown protein [Arabidopsis thaliana] 306 1e-080
gi|297840347|ref|XP_002888055.1| hypothetical protein ARALYDRAFT... 305 1e-080
gi|42571957|ref|NP_974069.1| Mitochondrial transcription termina... 304 4e-080
gi|297840333|ref|XP_002888048.1| hypothetical protein ARALYDRAFT... 301 3e-079
gi|297837213|ref|XP_002886488.1| hypothetical protein ARALYDRAFT... 292 1e-076
gi|15220717|ref|NP_176406.1| Mitochondrial transcription termina... 291 3e-076
gi|2160140|gb|AAB60762.1| F19K23.9 gene product [Arabidopsis tha... 291 3e-076
gi|2160138|gb|AAB60760.1| F19K23.6 gene product [Arabidopsis tha... 289 1e-075
gi|297812539|ref|XP_002874153.1| hypothetical protein ARALYDRAFT... 282 2e-073
gi|15237856|ref|NP_197781.1| Mitochondrial transcription termina... 269 1e-069
gi|297837217|ref|XP_002886490.1| hypothetical protein ARALYDRAFT... 269 1e-069
gi|297837219|ref|XP_002886491.1| hypothetical protein ARALYDRAFT... 243 1e-061
gi|15221482|ref|NP_176438.1| Mitochondrial transcription termina... 168 3e-039
gi|297815876|ref|XP_002875821.1| hypothetical protein ARALYDRAFT... 163 1e-037
gi|15220662|ref|NP_176388.1| Mitochondrial transcription termina... 154 4e-035
gi|297840327|ref|XP_002888045.1| hypothetical protein ARALYDRAFT... 151 3e-034
>gi|30696656|ref|NP_176402.2| Mitochondrial transcription termination factor
family protein [Arabidopsis thaliana]
Length = 462
Score = 314 bits (803), Expect = 4e-083
Identities = 156/256 (60%), Positives = 197/256 (76%), Gaps = 9/256 (3%)
Frame = +2
Query: 662 GVPQRFLFPLLVSDSQPVCGKDKFEMSVKKVVEMGFDPTTSKFVQALHVFYEMTEKTIEE 841
GVPQ+ LF LL+SD+QPVCGK+ FE S+KKVVEMGFDPTTSKFVQAL Y T+KTIEE
Sbjct: 202 GVPQKLLFSLLISDAQPVCGKENFEESLKKVVEMGFDPTTSKFVQALRAVYRFTDKTIEE 261
Query: 842 KVNVYEKLGFTVEEVWEMFKKCPYSLKFSERKITQTFETLERCGLREEEVVSVMKKRPEC 1021
+VNVY+ GF VE+VW MFKKCPY L SE+KI QT ETL++CGL E+EV+SV+KK P+C
Sbjct: 262 RVNVYKGFGFAVEDVWAMFKKCPYFLNSSEKKIGQTIETLKKCGLLEDEVISVLKKYPQC 321
Query: 1022 MRASEEKIKNCVETFLRIGFSGEEFVSMVKCFPTCSGLSAETVRRKVEFLVGEMEGWWSL 1201
+ SE+KI N +E FL +GFS +EF++MVK FP C LSAETV++K+EF+V +M W L
Sbjct: 322 IGTSEQKILNSIEIFLGLGFSRDEFITMVKRFPQCLILSAETVKKKIEFVVKKMN--WPL 379
Query: 1202 KDVVGIPPVLGYSLEKRMVPRCGVVRAVVERGVM-----RIPPMSSVLACSDKVFLNRFV 1366
KDVV P VLGY+LEKR VPRC V+ A++ + ++ +PPMSSVL C+D++FL R+V
Sbjct: 380 KDVVSNPTVLGYNLEKRTVPRCNVIEALMSKRLLGDTGSELPPMSSVLVCTDELFLKRYV 439
Query: 1367 LKHG--RLVPELMAIF 1408
HG LV ELM I+
Sbjct: 440 RNHGDKELVLELMTIY 455
>gi|15232683|ref|NP_190279.1| Mitochondrial transcription termination factor
family protein [Arabidopsis thaliana]
Length = 450
Score = 311 bits (795), Expect = 3e-082
Identities = 155/265 (58%), Positives = 202/265 (76%), Gaps = 4/265 (1%)
Frame = +2
Query: 620 KGTR*ETYRF*ERWGVPQRFLFPLLVSDSQPVCGKDKFEMSVKKVVEMGFDPTTSKFVQA 799
KG R GVPQ+ LF LL+S QPVCGK+KFE S+KKVV+MGFDP SKFV+A
Sbjct: 182 KGNRIRNISVLRELGVPQKLLFSLLISRYQPVCGKEKFEESLKKVVDMGFDPAKSKFVEA 241
Query: 800 LHVFYEMTEKTIEEKVNVYEKLGFTVEEVWEMFKKCPYSLKFSERKITQTFETLERCGLR 979
LHV YEM+EKTIEEKVNVY++LGF+ E+W +FKK PY LKFSE+KI FETL++CGL
Sbjct: 242 LHVVYEMSEKTIEEKVNVYKRLGFSEAEIWAIFKKWPYFLKFSEKKIILMFETLKKCGLV 301
Query: 980 EEEVVSVMKKRPECMRASEEKIKNCVETFLRIGFSGEEFVSMVKCFPTCSGLSAETVRRK 1159
EEE++SV+K RP+C+R+SE+KI + +E FL +GFS ++F MVK +P C+ S ET+R+K
Sbjct: 302 EEEIISVLKSRPQCIRSSEQKILDSIEMFLGLGFSRDDFKMMVKRYPCCTAYSGETLRKK 361
Query: 1160 VEFLVGEMEGWWSLKDVVGIPPVLGYSLEKRMVPRCGVVRAVVERGVM--RIPPMSSVLA 1333
E LV M W L+ VV IP VLGYSLEKR+VPR V++A++ +G++ PP+SSVL
Sbjct: 362 FEVLVKMMN--WPLEAVVMIPTVLGYSLEKRIVPRSNVIKALMSKGLIGSENPPISSVLV 419
Query: 1334 CSDKVFLNRFVLKHGRLVPELMAIF 1408
C+D+ FL R+V+KH +LVP+LMAIF
Sbjct: 420 CTDQEFLKRYVMKHDKLVPKLMAIF 444
>gi|297837169|ref|XP_002886466.1| hypothetical protein ARALYDRAFT_893233
[Arabidopsis lyrata subsp. lyrata]
Length = 473
Score = 308 bits (788), Expect = 2e-081
Identities = 152/266 (57%), Positives = 202/266 (75%), Gaps = 7/266 (2%)
Frame = +2
Query: 662 GVPQRFLFPLLVSDSQPVCGKDKFEMSVKKVVEMGFDPTTSKFVQALHVFYEMTEKTIEE 841
G+P + LF LL S QPVCGKD+F+ S+KK+VEMGFDPTT+KFV+AL+V Y +++KTIEE
Sbjct: 203 GMPHKLLFSLLTSVGQPVCGKDRFDASLKKIVEMGFDPTTAKFVKALYVVYNLSDKTIEE 262
Query: 842 KVNVYEKLGFTVEEVWEMFKKCPYSLKFSERKITQTFETLERCGLREEEVVSVMKKRPEC 1021
KV++Y++LGF VE+VW +FKK P+SLKFSE KITQT ETL+ CGL E EV+ V+KK P+
Sbjct: 263 KVHIYKRLGFAVEDVWVIFKKWPFSLKFSEEKITQTIETLKMCGLNENEVLQVLKKYPQF 322
Query: 1022 MRASEEKIKNCVETFLRIGFSGEEFVSMVKCFPTCSGLSAETVRRKVEFLVGEMEGWWSL 1201
+R S++KI N +ETFL +GFS +EF +VKCFP C GLS ETV++K EF+V + WSL
Sbjct: 323 IRMSQQKILNFIETFLSLGFSRDEFTMIVKCFPMCFGLSGETVKKKTEFVVKKTN--WSL 380
Query: 1202 KDVVGIPPVLGYSLEKRMVPRCGVVRAVVERGVM--RIPPMSSVLACSDKVFLNRFVLKH 1375
KD P V GYSLEKR+VPRC V++A++ RG++ +P M+SVLAC+D F+ R+V K
Sbjct: 381 KDTTSFPQVFGYSLEKRIVPRCNVIKALMSRGLLGSELPSMASVLACNDHAFVKRYVRKQ 440
Query: 1376 G--RLVPELMAIF-GTHGSTKMKKVK 1444
LV ELMAIF G + ++K +K
Sbjct: 441 NDKELVAELMAIFIGKKRNFRLKSLK 466
>gi|15220660|ref|NP_176387.1| Mitochondrial transcription termination factor
family protein [Arabidopsis thaliana]
Length = 457
Score = 307 bits (785), Expect = 5e-081
Identities = 149/253 (58%), Positives = 194/253 (76%), Gaps = 6/253 (2%)
Frame = +2
Query: 662 GVPQRFLFPLLVSDSQPVCGKDKFEMSVKKVVEMGFDPTTSKFVQALHVFYEMTEKTIEE 841
GV QR LFPLL+SD QPVCGK++FE S+KKVVEMGFDP T+KFV+AL V Y M++KTIEE
Sbjct: 201 GVAQRLLFPLLISDGQPVCGKERFEESLKKVVEMGFDPETTKFVEALRVIYRMSDKTIEE 260
Query: 842 KVNVYEKLGFTVEEVWEMFKKCPYSLKFSERKITQTFETLERCGLREEEVVSVMKKRPEC 1021
KVNVY++LGF V +VW +FKK P L +SE+KIT TFETL+ CGL + EV+ ++KK P+C
Sbjct: 261 KVNVYKRLGFGVADVWAIFKKWPSFLSYSEKKITHTFETLKSCGLLKHEVLLLLKKHPKC 320
Query: 1022 MRASEEKIKNCVETFLRIGFSGEEFVSMVKCFPTCSGLSAETVRRKVEFLVGEMEGWWSL 1201
+ +SE+KI N +ETFL +GFS +EF MVK +P C +AETV++K EF+V M W L
Sbjct: 321 ICSSEQKIVNSIETFLGLGFSRDEFAMMVKRYPQCIDYTAETVKKKTEFIVKNMN--WPL 378
Query: 1202 KDVVGIPPVLGYSLEKRMVPRCGVVRAVVERGVMR----IPPMSSVLACSDKVFLNRFVL 1369
+ +V IP V GYSLEKR VPRC V++ ++ +G+M+ PPMSSVL +D+ FL R+V+
Sbjct: 379 EALVSIPQVFGYSLEKRTVPRCNVIKTLISKGLMKDGSEAPPMSSVLTSTDQAFLRRYVM 438
Query: 1370 KHGRLVPELMAIF 1408
KH +L PELMAIF
Sbjct: 439 KHDKLAPELMAIF 451
>gi|26450011|dbj|BAC42126.1| unknown protein [Arabidopsis thaliana]
Length = 457
Score = 306 bits (782), Expect = 1e-080
Identities = 148/253 (58%), Positives = 194/253 (76%), Gaps = 6/253 (2%)
Frame = +2
Query: 662 GVPQRFLFPLLVSDSQPVCGKDKFEMSVKKVVEMGFDPTTSKFVQALHVFYEMTEKTIEE 841
GV QR LFPLL+SD QPVCGK++FE S+KKVVEMGFDP T+KFV+AL V Y M++KTIEE
Sbjct: 201 GVAQRLLFPLLISDGQPVCGKERFEESLKKVVEMGFDPETTKFVEALRVIYRMSDKTIEE 260
Query: 842 KVNVYEKLGFTVEEVWEMFKKCPYSLKFSERKITQTFETLERCGLREEEVVSVMKKRPEC 1021
KVNVY++LGF V +VW +FKK P L +SE++IT TFETL+ CGL + EV+ ++KK P+C
Sbjct: 261 KVNVYKRLGFGVADVWAIFKKWPSFLSYSEKRITHTFETLKSCGLLKHEVLLLLKKHPKC 320
Query: 1022 MRASEEKIKNCVETFLRIGFSGEEFVSMVKCFPTCSGLSAETVRRKVEFLVGEMEGWWSL 1201
+ +SE+KI N +ETFL +GFS +EF MVK +P C +AETV++K EF+V M W L
Sbjct: 321 ICSSEQKIVNSIETFLGLGFSRDEFAMMVKRYPQCIDYTAETVKKKTEFIVKNMN--WPL 378
Query: 1202 KDVVGIPPVLGYSLEKRMVPRCGVVRAVVERGVMR----IPPMSSVLACSDKVFLNRFVL 1369
+ +V IP V GYSLEKR VPRC V++ ++ +G+M+ PPMSSVL +D+ FL R+V+
Sbjct: 379 EALVSIPQVFGYSLEKRTVPRCNVIKTLISKGLMKDGSEAPPMSSVLTSTDQAFLRRYVM 438
Query: 1370 KHGRLVPELMAIF 1408
KH +L PELMAIF
Sbjct: 439 KHDKLAPELMAIF 451
>gi|297840347|ref|XP_002888055.1| hypothetical protein ARALYDRAFT_315190
[Arabidopsis lyrata subsp. lyrata]
Length = 445
Score = 305 bits (781), Expect = 1e-080
Identities = 147/251 (58%), Positives = 197/251 (78%), Gaps = 4/251 (1%)
Frame = +2
Query: 662 GVPQRFLFPLLVSDSQPVCGKDKFEMSVKKVVEMGFDPTTSKFVQALHVFYEMTEKTIEE 841
GV QR LFPLL+SDSQPVCGK++FE S+KKVVEMGFDP TSKFV+AL V Y M++KTI+E
Sbjct: 191 GVAQRLLFPLLISDSQPVCGKERFEESLKKVVEMGFDPETSKFVEALRVIYRMSDKTIKE 250
Query: 842 KVNVYEKLGFTVEEVWEMFKKCPYSLKFSERKITQTFETLERCGLREEEVVSVMKKRPEC 1021
KVNVY++LGF V +VW +FKK P L +SE+KIT TFETL RCGL + EV+S++KK P+C
Sbjct: 251 KVNVYKRLGFGVADVWAIFKKWPSFLSYSEKKITHTFETLMRCGLLKHEVLSLIKKHPKC 310
Query: 1022 MRASEEKIKNCVETFLRIGFSGEEFVSMVKCFPTCSGLSAETVRRKVEFLVGEMEGWWSL 1201
+ +SE+KI N +E FL +GFS +EF M+K +P C +AETV++K +F+V +M W L
Sbjct: 311 ICSSEQKIVNSIENFLGLGFSRDEFAMMIKRYPQCIDYTAETVKKKTDFIVKKMN--WPL 368
Query: 1202 KDVVGIPPVLGYSLEKRMVPRCGVVRAVVERGVM--RIPPMSSVLACSDKVFLNRFVLKH 1375
+ +V IP + GYSLEKR VPRC V++ ++ +G++ IPPMSS+L +D+ FL R+V+K+
Sbjct: 369 EGLVLIPQIFGYSLEKRTVPRCNVIKTLMSKGLLGSEIPPMSSILTSTDQAFLRRYVMKY 428
Query: 1376 GRLVPELMAIF 1408
+LVPELMAIF
Sbjct: 429 DKLVPELMAIF 439
>gi|42571957|ref|NP_974069.1| Mitochondrial transcription termination factor
family protein [Arabidopsis thaliana]
Length = 461
Score = 304 bits (777), Expect = 4e-080
Identities = 154/253 (60%), Positives = 193/253 (76%), Gaps = 6/253 (2%)
Frame = +2
Query: 662 GVPQRFLFPLLVSDSQPVCGKDKFEMSVKKVVEMGFDPTTSKFVQALHVFYEMTEKTIEE 841
GVPQR LFPLL+SD QPVCGK+ FE S+KKVVEMGFDPTTSKFV+AL V Y +KTIE
Sbjct: 205 GVPQRLLFPLLISDHQPVCGKENFEESLKKVVEMGFDPTTSKFVKALRVVYRFRDKTIEA 264
Query: 842 KVNVYEKLGFTVEEVWEMFKKCPYSLKFSERKITQTFETLERCGLREEEVVSVMKKRPEC 1021
KVNV + LGF+V +VW MFKKCP L FSE KI QT+ETL++CGL E++V+SV+KK P+C
Sbjct: 265 KVNVCKSLGFSVGDVWAMFKKCPSFLNFSENKIVQTWETLKKCGLLEDDVLSVLKKFPQC 324
Query: 1022 MRASEEKIKNCVETFLRIGFSGEEFVSMVKCFPTCSGLSAETVRRKVEFLVGEMEGWWSL 1201
+ ASE+KI N +ETFL +GFS +E + K FP C LSAETV++K EFLV +M W L
Sbjct: 325 INASEQKIMNSIETFLGLGFSRDEVAMIAKRFPQCLILSAETVKKKTEFLVKKMN--WPL 382
Query: 1202 KDVVGIPPVLGYSLEKRMVPRCGVVRAVVERGVM--RIPPMSSVLACSDKVFLNRFVLKH 1375
K VV P VLGYSLEKR +PRC V++A++ +G + +P MSSVL C+++ FL R+V H
Sbjct: 383 KAVVSTPAVLGYSLEKRTIPRCNVIKALMSKGSLGSELPGMSSVLVCTNEEFLCRYVKNH 442
Query: 1376 G--RLVPELMAIF 1408
++VPELMAIF
Sbjct: 443 DDKKIVPELMAIF 455
>gi|297840333|ref|XP_002888048.1| hypothetical protein ARALYDRAFT_893289
[Arabidopsis lyrata subsp. lyrata]
Length = 383
Score = 301 bits (769), Expect = 3e-079
Identities = 151/266 (56%), Positives = 202/266 (75%), Gaps = 10/266 (3%)
Frame = +2
Query: 662 GVPQRFLFPLLVSDSQPVCGKDKFEMSVKKVVEMGFDPTTSKFVQALHVFYEMTEKTIEE 841
GVPQR LF LL+SDS PVCGK+KFE S+KKVVEMGFDPTTSKFV+ALH FY+M++KTIEE
Sbjct: 103 GVPQRLLFSLLISDSGPVCGKEKFEESLKKVVEMGFDPTTSKFVKALHGFYQMSDKTIEE 162
Query: 842 KVNVYEKLGFTVEEVWEMFKKCPYSLKFSERKITQTFETLERCGLREEEVVSVMKKRPEC 1021
K++VY++LGF+VE+VW +FKK P SLKFSE KITQT ETL+ CGL E EV+ V+KK P+
Sbjct: 163 KLDVYKRLGFSVEDVWVIFKKWPCSLKFSEEKITQTIETLKMCGLDENEVLQVLKKYPQF 222
Query: 1022 MRASEEKIKNCVETFLRIGFSGEEFVSMVKCFPTCSGLSAETVRRKVEFLVGEMEGWWSL 1201
+R SE+KI + +ETFL +GFS +E V ++K FP C GLSAETV++K EFLV +M W L
Sbjct: 223 IRISEQKILSLIETFLGVGFSRDECVMIIKGFPMCFGLSAETVKKKTEFLVKKMN--WPL 280
Query: 1202 KDVVGIPPVLGYSLEKRMVPRCGVVRAVVERGVM--RIPPMSSVLACSDKVFLNRFVLKH 1375
K VV P LGYSL+KR+VPRC V++A++ +G + +P ++SVLAC+D+ FLNR
Sbjct: 281 KSVVSNPAGLGYSLQKRIVPRCNVIKALMSKGSLGSELPSVASVLACTDQAFLNRMTTMV 340
Query: 1376 GRLVPELMAIFGTHGSTKMKKVKGLC 1453
+++ E + + T ++ ++ C
Sbjct: 341 EKILSERVPM------TSLRAIRSTC 360
>gi|297837213|ref|XP_002886488.1| hypothetical protein ARALYDRAFT_893270
[Arabidopsis lyrata subsp. lyrata]
Length = 463
Score = 292 bits (747), Expect = 1e-076
Identities = 144/252 (57%), Positives = 192/252 (76%), Gaps = 5/252 (1%)
Frame = +2
Query: 662 GVPQRFLFPLLVSDSQPVCGKDKFEMSVKKVVEMGFDPTTSKFVQALHVFYEMTEKTIEE 841
GVPQR LF LL+S+ CGK+KFE S++KVV MGFDPTT KFV+AL + Y +++K +EE
Sbjct: 208 GVPQRLLFSLLISNHHVCCGKEKFEESLEKVVGMGFDPTTPKFVEALCIVYGLSDKRLEE 267
Query: 842 KVNVYEKLGFTVEEVWEMFKKCPYSLKFSERKITQTFETLERCGLREEEVVSVMKKRPEC 1021
NVY++ G TV ++WE+FKKCP L +SE +I QTFE L+RCGL E+EV+SV KK P C
Sbjct: 268 NFNVYKRFGLTVNDIWELFKKCPAFLGYSENRIIQTFEALKRCGLCEDEVMSVFKKNPLC 327
Query: 1022 MRASEEKIKNCVETFLRIGFSGEEFVSMVKCFPTCSGLSAETVRRKVEFLVGEMEGWWSL 1201
+RASE++I N +ETF+ +GFS +EFV MVK FP C G SAE V++K EF+V +M W L
Sbjct: 328 LRASEQQILNSMETFIGLGFSRDEFVMMVKRFPQCIGYSAEMVKKKTEFVVKKMN--WPL 385
Query: 1202 KDVVGIPPVLGYSLEKRMVPRCGVVRAVVERGVM--RIPPMSSVLACSDKVFLNRFVLKH 1375
K + P VLGYS+EKR+VPRC V++A++ +G + +PPM SVLAC+D+ FLNR+V++H
Sbjct: 386 KVITLFPQVLGYSMEKRIVPRCNVIKALMSKGSLGSELPPMPSVLACTDQTFLNRYVVEH 445
Query: 1376 G-RLVPELMAIF 1408
+LV ELMAIF
Sbjct: 446 DEKLVLELMAIF 457
>gi|15220717|ref|NP_176406.1| Mitochondrial transcription termination factor
family protein [Arabidopsis thaliana]
Length = 463
Score = 291 bits (743), Expect = 3e-076
Identities = 143/252 (56%), Positives = 190/252 (75%), Gaps = 5/252 (1%)
Frame = +2
Query: 662 GVPQRFLFPLLVSDSQPVCGKDKFEMSVKKVVEMGFDPTTSKFVQALHVFYEMTEKTIEE 841
GVPQR LF LL S+ CGK+KFE S+ KVV MGFDPTT KFV+AL + Y +++K +EE
Sbjct: 208 GVPQRLLFSLLFSNHHVCCGKEKFEESLNKVVGMGFDPTTPKFVEALCIVYGLSDKRLEE 267
Query: 842 KVNVYEKLGFTVEEVWEMFKKCPYSLKFSERKITQTFETLERCGLREEEVVSVMKKRPEC 1021
NVY++ G TV +VWE+FKKCP L +SE +I QTFE L+RCGL E+EV+SV KK P C
Sbjct: 268 NFNVYKRFGLTVNDVWELFKKCPAFLGYSENRIIQTFEALKRCGLCEDEVLSVFKKNPLC 327
Query: 1022 MRASEEKIKNCVETFLRIGFSGEEFVSMVKCFPTCSGLSAETVRRKVEFLVGEMEGWWSL 1201
+RASE++I N +ETF+ +GFS +EFV MVKC P C G SAE V++K EF+V +M W L
Sbjct: 328 LRASEQQILNSMETFIGLGFSRDEFVMMVKCLPQCIGYSAEMVKKKTEFVVKKMN--WPL 385
Query: 1202 KDVVGIPPVLGYSLEKRMVPRCGVVRAVVERGVM--RIPPMSSVLACSDKVFLNRFVLKH 1375
K + P VLGYS+EKR VPRC V++A++ +G++ +PPM+SVLAC+D+ FL R+V++H
Sbjct: 386 KVITLFPQVLGYSMEKRTVPRCNVIKALMSKGLLGSELPPMASVLACTDQTFLKRYVVEH 445
Query: 1376 G-RLVPELMAIF 1408
+LV ELM+IF
Sbjct: 446 DEKLVLELMSIF 457
>gi|2160140|gb|AAB60762.1| F19K23.9 gene product [Arabidopsis thaliana]
Length = 448
Score = 291 bits (743), Expect = 3e-076
Identities = 143/252 (56%), Positives = 190/252 (75%), Gaps = 5/252 (1%)
Frame = +2
Query: 662 GVPQRFLFPLLVSDSQPVCGKDKFEMSVKKVVEMGFDPTTSKFVQALHVFYEMTEKTIEE 841
GVPQR LF LL S+ CGK+KFE S+ KVV MGFDPTT KFV+AL + Y +++K +EE
Sbjct: 193 GVPQRLLFSLLFSNHHVCCGKEKFEESLNKVVGMGFDPTTPKFVEALCIVYGLSDKRLEE 252
Query: 842 KVNVYEKLGFTVEEVWEMFKKCPYSLKFSERKITQTFETLERCGLREEEVVSVMKKRPEC 1021
NVY++ G TV +VWE+FKKCP L +SE +I QTFE L+RCGL E+EV+SV KK P C
Sbjct: 253 NFNVYKRFGLTVNDVWELFKKCPAFLGYSENRIIQTFEALKRCGLCEDEVLSVFKKNPLC 312
Query: 1022 MRASEEKIKNCVETFLRIGFSGEEFVSMVKCFPTCSGLSAETVRRKVEFLVGEMEGWWSL 1201
+RASE++I N +ETF+ +GFS +EFV MVKC P C G SAE V++K EF+V +M W L
Sbjct: 313 LRASEQQILNSMETFIGLGFSRDEFVMMVKCLPQCIGYSAEMVKKKTEFVVKKMN--WPL 370
Query: 1202 KDVVGIPPVLGYSLEKRMVPRCGVVRAVVERGVM--RIPPMSSVLACSDKVFLNRFVLKH 1375
K + P VLGYS+EKR VPRC V++A++ +G++ +PPM+SVLAC+D+ FL R+V++H
Sbjct: 371 KVITLFPQVLGYSMEKRTVPRCNVIKALMSKGLLGSELPPMASVLACTDQTFLKRYVVEH 430
Query: 1376 G-RLVPELMAIF 1408
+LV ELM+IF
Sbjct: 431 DEKLVLELMSIF 442
>gi|2160138|gb|AAB60760.1| F19K23.6 gene product [Arabidopsis thaliana]
Length = 827
Score = 289 bits (738), Expect = 1e-075
Identities = 142/228 (62%), Positives = 178/228 (78%), Gaps = 7/228 (3%)
Frame = +2
Query: 662 GVPQRFLFPLLVSDSQPVCGKDKFEMSVKKVVEMGFDPTTSKFVQALHVFYEMTEKTIEE 841
GVPQ+ LF LL+SD+QPVCGK+ FE S+KKVVEMGFDPTTSKFVQAL Y T+KTIEE
Sbjct: 585 GVPQKLLFSLLISDAQPVCGKENFEESLKKVVEMGFDPTTSKFVQALRAVYRFTDKTIEE 644
Query: 842 KVNVYEKLGFTVEEVWEMFKKCPYSLKFSERKITQTFETLERCGLREEEVVSVMKKRPEC 1021
+VNVY+ GF VE+VW MFKKCPY L SE+KI QT ETL++CGL E+EV+SV+KK P+C
Sbjct: 645 RVNVYKGFGFAVEDVWAMFKKCPYFLNSSEKKIGQTIETLKKCGLLEDEVISVLKKYPQC 704
Query: 1022 MRASEEKIKNCVETFLRIGFSGEEFVSMVKCFPTCSGLSAETVRRKVEFLVGEMEGWWSL 1201
+ SE+KI N +E FL +GFS +EF++MVK FP C LSAETV++K+EF+V +M W L
Sbjct: 705 IGTSEQKILNSIEIFLGLGFSRDEFITMVKRFPQCLILSAETVKKKIEFVVKKMN--WPL 762
Query: 1202 KDVVGIPPVLGYSLEKRMVPRCGVVRAVVERGVM-----RIPPMSSVL 1330
KDVV P VLGY+LEKR VPRC V+ A++ + ++ +PPMSSVL
Sbjct: 763 KDVVSNPTVLGYNLEKRTVPRCNVIEALMSKRLLGDTGSELPPMSSVL 810
>gi|297812539|ref|XP_002874153.1| hypothetical protein ARALYDRAFT_489254
[Arabidopsis lyrata subsp. lyrata]
Length = 454
Score = 282 bits (720), Expect = 2e-073
Identities = 141/250 (56%), Positives = 191/250 (76%), Gaps = 3/250 (1%)
Frame = +2
Query: 662 GVPQRFLFPLLVSDSQPVCGKDKFEMSVKKVVEMGFDPTTSKFVQALHVFYEMTEKTIEE 841
GVPQR L LL+S ++PVCGK++FE SVKK+VEMGFDP + KFV AL+VFY++++KTIEE
Sbjct: 199 GVPQRLLLNLLISRAKPVCGKERFEESVKKIVEMGFDPKSPKFVSALYVFYDLSDKTIEE 258
Query: 842 KVNVYEKLGFTVEEVWEMFKKCPYSLKFSERKITQTFETLERCGLREEEVVSVMKKRPEC 1021
KVN Y++LG +++EVW +FKK P+SLK+SE+KI QTFETL+R GLREEEV ++K+ PEC
Sbjct: 259 KVNAYKRLGLSLDEVWVVFKKWPFSLKYSEKKIIQTFETLKRVGLREEEVCLMVKRYPEC 318
Query: 1022 MRASEEKIKNCVETFLRIGFSGEEFVSMVKCFPTCSGLSAETVRRKVEFLVGEMEGWWSL 1201
+ SEEKI VETFL +GF+ +EFV ++K P C GL+A++V++K EFLV M W L
Sbjct: 319 VGTSEEKIVKSVETFLELGFTKDEFVMIIKRHPQCIGLAADSVKKKTEFLVKTM--GWPL 376
Query: 1202 KDVVGIPPVLGYSLEKRMVPRCGVVRAVVERGVM-RIPPMSSVLACSDKVFLNRFVLKHG 1378
K V P VLG+SLEK ++PRC V++A++ +G++ IP +SSVL FL FV KH
Sbjct: 377 KVVASTPIVLGFSLEKFVLPRCNVIKALLSKGLIDEIPAISSVLTSPKLKFLKLFVEKHQ 436
Query: 1379 RLVPELMAIF 1408
++PEL +IF
Sbjct: 437 DVLPELNSIF 446
>gi|15237856|ref|NP_197781.1| Mitochondrial transcription termination factor
family protein [Arabidopsis thaliana]
Length = 457
Score = 269 bits (687), Expect = 1e-069
Identities = 137/250 (54%), Positives = 184/250 (73%), Gaps = 3/250 (1%)
Frame = +2
Query: 662 GVPQRFLFPLLVSDSQPVCGKDKFEMSVKKVVEMGFDPTTSKFVQALHVFYEMTEKTIEE 841
GVPQR L LL+S ++PVCGK++FE SVKK+VEMGFDP + KFV AL+VFYE+++KTIEE
Sbjct: 198 GVPQRLLLNLLISRAKPVCGKERFEESVKKIVEMGFDPKSPKFVNALYVFYELSDKTIEE 257
Query: 842 KVNVYEKLGFTVEEVWEMFKKCPYSLKFSERKITQTFETLERCGLREEEVVSVMKKRPEC 1021
KVN Y +LG +V EVW +FKK P+SLK+SE+ I Q FETL+R GL +EEV V+KK PEC
Sbjct: 258 KVNAYIRLGLSVNEVWAVFKKWPFSLKYSEKNIIQKFETLKRVGLTKEEVCLVVKKYPEC 317
Query: 1022 MRASEEKIKNCVETFLRIGFSGEEFVSMVKCFPTCSGLSAETVRRKVEFLVGEMEGWWSL 1201
+ SEEKI V+TFL +GF+ +E + ++K P C GL+A++V++K EFLV M W L
Sbjct: 318 VGTSEEKIVKSVKTFLELGFTKDEVLMIIKRHPQCIGLAADSVKKKTEFLVKTM--GWPL 375
Query: 1202 KDVVGIPPVLGYSLEKRMVPRCGVVRAVVERGVM-RIPPMSSVLACSDKVFLNRFVLKHG 1378
K V P VLG+SLEK ++PRC V++A++ G++ +P +SSVL FL FV KH
Sbjct: 376 KVVASTPIVLGFSLEKFVLPRCNVIKALMSNGLIGEMPAISSVLTSPKLKFLKLFVEKHQ 435
Query: 1379 RLVPELMAIF 1408
++PEL +IF
Sbjct: 436 DVLPELNSIF 445
>gi|297837217|ref|XP_002886490.1| hypothetical protein ARALYDRAFT_315177
[Arabidopsis lyrata subsp. lyrata]
Length = 812
Score = 269 bits (686), Expect = 1e-069
Identities = 136/225 (60%), Positives = 175/225 (77%), Gaps = 4/225 (1%)
Frame = +2
Query: 662 GVPQRFLFPLLVSDSQPVCGKDKFEMSVKKVVEMGFDPTTSKFVQALHVFYEMTEKTIEE 841
GVPQR LF LL+SD QPVCGK+ FE S+KKVVEMGFDPTTSKFV+AL+V Y ++++TIEE
Sbjct: 573 GVPQRVLFSLLISDHQPVCGKENFEESLKKVVEMGFDPTTSKFVEALNVVYRLSDETIEE 632
Query: 842 KVNVYEKLGFTVEEVWEMFKKCPYSLKFSERKITQTFETLERCGLREEEVVSVMKKRPEC 1021
KV+V + LGF+V +VWEMFKK P L SE+KI+QTFETL++CGL E+EV+S++KK P+C
Sbjct: 633 KVSVCKGLGFSVGDVWEMFKKWPCFLNNSEKKISQTFETLKKCGLPEDEVLSLLKKFPQC 692
Query: 1022 MRASEEKIKNCVETFLRIGFSGEEFVSMVKCFPTCSGLSAETVRRKVEFLVGEMEGWWSL 1201
+ ASE+KI N +ETF +GFS +EF + FP C LSA TV++K EF+V +M W L
Sbjct: 693 INASEQKILNTIETFQDLGFSRDEFAMIAMRFPPCLILSAATVKKKTEFVVKKMN--WPL 750
Query: 1202 KDVVGIPPVLGYSLEKRMVPRCGVVRAVVERGV--MRIPPMSSVL 1330
K VV P VLGYSLEKR VPRC V++A++ + + +PPMSSVL
Sbjct: 751 KAVVSTPAVLGYSLEKRTVPRCNVIKALMSKRLPGSELPPMSSVL 795
>gi|297837219|ref|XP_002886491.1| hypothetical protein ARALYDRAFT_893275
[Arabidopsis lyrata subsp. lyrata]
Length = 479
Score = 243 bits (618), Expect = 1e-061
Identities = 124/220 (56%), Positives = 162/220 (73%), Gaps = 9/220 (4%)
Frame = +2
Query: 662 GVPQRFLFPLLVSDSQPVCGKDKFEMSVKKVVEMGFDPTTSKFVQALHVFYEMTEKTIEE 841
GVPQR LFPLLVSD + VCGK+KFE S+KKVVEMGF+PTTSKFV AL V ++EK IEE
Sbjct: 197 GVPQRLLFPLLVSDRKLVCGKEKFEESLKKVVEMGFEPTTSKFVNALRVVQRISEKEIEE 256
Query: 842 KVNVYEKLGFTVEEVWEMFKKCPYSLKFSERKITQTFETLERCGLREEEVVSVMKKRPEC 1021
KV+ Y++LGF V +V EMFKK P S++ SE+KITQ FETL++CGL E+E++SV P+C
Sbjct: 257 KVSFYKRLGFDVGDVSEMFKKYPVSMRLSEKKITQKFETLKKCGLLEDEILSVF---PQC 313
Query: 1022 MRASEEKIKNCVETFLRIGFSGEEFVSMVKCFPTCSGLSAETVRRKVEFLVGEMEGW--- 1192
+ ASE+KI +ETF +GFS EF MVK FP C +SAETV++K +FLV + +
Sbjct: 314 IGASEQKIAKSIETFKDLGFSKNEFAFMVKHFPMCLNISAETVKKKTKFLVKKKNKFMVK 373
Query: 1193 ---WSLKDVVGIPPVLGYSLEKRMVPRCGVVRAVVERGVM 1303
W L V P VLG S+EKR+VPRC V++A++ +G++
Sbjct: 374 KMKWPLNSVAFYPQVLGLSMEKRIVPRCNVMKALMSKGLL 413
>gi|15221482|ref|NP_176438.1| Mitochondrial transcription termination factor
family protein [Arabidopsis thaliana]
Length = 334
Score = 168 bits (424), Expect = 3e-039
Identities = 82/117 (70%), Positives = 96/117 (82%), Gaps = 4/117 (3%)
Frame = +2
Query: 662 GVPQRFLFPLLVSDSQPVCGKDKFEMSVKKVVEMGFDPTTSKFVQALHVFYEMTEKTIEE 841
G+P + LFPLL+S QPVCGKD+F S+KKVVEMGFDPTT+KFV+ALHV YEM +KTIEE
Sbjct: 206 GMPHKLLFPLLISVGQPVCGKDRFNTSLKKVVEMGFDPTTAKFVKALHVSYEMNDKTIEE 265
Query: 842 KVNVYEKLGFTVEEVWEMFKKCPYSLKFSERKITQTFETLERCGLRE----EEVVSV 1000
KVNVY+ LGF VE+VW +FKK PYSLK+SE KITQT ETL+ CGLR EEV S+
Sbjct: 266 KVNVYKMLGFAVEDVWVIFKKWPYSLKYSEEKITQTIETLKMCGLRGPSSFEEVSSI 322
>gi|297815876|ref|XP_002875821.1| hypothetical protein ARALYDRAFT_485072
[Arabidopsis lyrata subsp. lyrata]
Length = 433
Score = 163 bits (410), Expect = 1e-037
Identities = 74/112 (66%), Positives = 97/112 (86%)
Frame = +2
Query: 662 GVPQRFLFPLLVSDSQPVCGKDKFEMSVKKVVEMGFDPTTSKFVQALHVFYEMTEKTIEE 841
GVPQ+ LFPL++S+ QPVCGK+KFE ++KKVV+MGFDPT S FV+ALHV Y+M+EKTIEE
Sbjct: 196 GVPQKLLFPLVISNYQPVCGKEKFEETLKKVVDMGFDPTKSTFVEALHVVYKMSEKTIEE 255
Query: 842 KVNVYEKLGFTVEEVWEMFKKCPYSLKFSERKITQTFETLERCGLREEEVVS 997
KVNVY++LGF+ ++W +FKK P+ LKFSE+KI +ETL++CGL EEEV+S
Sbjct: 256 KVNVYKRLGFSEVDIWAIFKKWPFFLKFSEKKIILMYETLKKCGLVEEEVIS 307
>gi|15220662|ref|NP_176388.1| Mitochondrial transcription termination factor
family protein [Arabidopsis thaliana]
Length = 418
Score = 154 bits (389), Expect = 4e-035
Identities = 74/137 (54%), Positives = 97/137 (70%)
Frame = +2
Query: 662 GVPQRFLFPLLVSDSQPVCGKDKFEMSVKKVVEMGFDPTTSKFVQALHVFYEMTEKTIEE 841
G+P + LF LL+SDSQPVCGK+KFE ++KKVVEMGFDPTTSKFV+AL V Y+M EKTIEE
Sbjct: 200 GMPHKLLFSLLISDSQPVCGKEKFEETLKKVVEMGFDPTTSKFVEALQVIYKMNEKTIEE 259
Query: 842 KVNVYEKLGFTVEEVWEMFKKCPYSLKFSERKITQTFETLERCGLREEEVVSVMKKRPEC 1021
KV++Y+ LGF V +VW FKK P SL+ SE+K+ + ET G +E ++K P C
Sbjct: 260 KVHLYKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFLGLGFSRDEFAKMVKHFPPC 319
Query: 1022 MRASEEKIKNCVETFLR 1072
+ S E +K E ++
Sbjct: 320 IGLSTETVKKKTEFLVK 336
>gi|297840327|ref|XP_002888045.1| hypothetical protein ARALYDRAFT_338172
[Arabidopsis lyrata subsp. lyrata]
Length = 351
Score = 151 bits (381), Expect = 3e-034
Identities = 71/137 (51%), Positives = 97/137 (70%)
Frame = +2
Query: 662 GVPQRFLFPLLVSDSQPVCGKDKFEMSVKKVVEMGFDPTTSKFVQALHVFYEMTEKTIEE 841
GVP++ L LL+S QPVCGK+ F+ S+KKVVEMGFDPTTS FV ALH+ Y+M++KTIEE
Sbjct: 188 GVPRKRLLSLLISKFQPVCGKENFDASLKKVVEMGFDPTTSTFVHALHMLYQMSDKTIEE 247
Query: 842 KVNVYEKLGFTVEEVWEMFKKCPYSLKFSERKITQTFETLERCGLREEEVVSVMKKRPEC 1021
KV VY +GFTV++VW MFKK P SL+ SE+K+ + ET G +E + + K+ P+C
Sbjct: 248 KVEVYRSIGFTVDDVWAMFKKWPRSLRHSEKKVANSVETFLGLGFSRDEFLMMFKRFPQC 307
Query: 1022 MRASEEKIKNCVETFLR 1072
+ S E +K E ++
Sbjct: 308 IGYSTELVKKKTEFLVK 324
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,313,363,328,120
Number of Sequences: 15229318
Number of Extensions: 1313363328120
Number of Successful Extensions: 373990951
Number of sequences better than 0.0: 0
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