BLASTX 7.6.2
Query= UN10764 /QuerySize=1547
(1546 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297796163|ref|XP_002865966.1| hypothetical protein ARALYDRAFT... 205 2e-050
gi|297851488|ref|XP_002893625.1| hypothetical protein ARALYDRAFT... 198 4e-048
gi|15221502|ref|NP_174365.1| F-box domain-containing protein [Ar... 170 8e-040
gi|4926821|gb|AAD32931.1|AC004135_6 T17H7.6 [Arabidopsis thaliana] 164 3e-038
gi|297851796|ref|XP_002893779.1| hypothetical protein ARALYDRAFT... 162 2e-037
gi|297846034|ref|XP_002890898.1| hypothetical protein ARALYDRAFT... 153 8e-035
gi|15223258|ref|NP_174543.1| putative F-box protein [Arabidopsis... 146 2e-032
gi|297846032|ref|XP_002890897.1| hypothetical protein ARALYDRAFT... 119 2e-024
gi|297846240|ref|XP_002891001.1| predicted protein [Arabidopsis ... 85 4e-014
gi|297840545|ref|XP_002888154.1| hypothetical protein ARALYDRAFT... 73 1e-010
gi|15241905|ref|NP_201072.1| putative F-box protein [Arabidopsis... 70 1e-009
gi|297793847|ref|XP_002864808.1| predicted protein [Arabidopsis ... 66 1e-008
gi|297834148|ref|XP_002884956.1| hypothetical protein ARALYDRAFT... 64 6e-008
gi|297793843|ref|XP_002864806.1| hypothetical protein ARALYDRAFT... 62 2e-007
>gi|297796163|ref|XP_002865966.1| hypothetical protein ARALYDRAFT_357572
[Arabidopsis lyrata subsp. lyrata]
Length = 455
Score = 205 bits (521), Expect = 2e-050
Identities = 114/212 (53%), Positives = 138/212 (65%), Gaps = 13/212 (6%)
Frame = +1
Query: 784 HEVIRLGRGGRVVSRTQITSPPYHPITRGRCINGFIYYAAPVPAETPPTPVIVCFDVRYE 963
HEVI LG GG SR Q+T+ PY+P+T+G ING IY+ A P PVIVCFDVRYE
Sbjct: 233 HEVITLGGGGE-ESRNQVTTAPYYPVTKGLYINGSIYHGAWAP-RLRMDPVIVCFDVRYE 290
Query: 964 TILSFIPTPREVLFWQALTSLIDYKGKLAVVVPICQGRGSSFDRFNLWILEDVTKQEWSK 1143
+ LSFI PR V+ + + LIDYKGKLA I + F F+LWILEDV K +WSK
Sbjct: 291 S-LSFIKAPRVVVVRERESILIDYKGKLA---SIAINPYAPFQIFDLWILEDVNKHDWSK 346
Query: 1144 QTFELPLSLPFNIGMGKRMISQGTNKGGEIIFSPATLPDRAQPFYVFYFNPVTKSMRRVR 1323
QTFELP SL M S GTNK GEIIF+P TLP QPF++FY+N TK +RRV
Sbjct: 347 QTFELPFSL-------VNMTSPGTNKAGEIIFAPKTLPPTVQPFFIFYYNVETKDLRRVS 399
Query: 1324 IHGVADTEDFLSRYGLTGICAASFSPHHVDSI 1419
+HG+AD ++F RYGL S SP HV+S+
Sbjct: 400 LHGIADDKEFWRRYGLKHNMCVSISPEHVESL 431
Score = 173 bits (438), Expect = 7e-041
Identities = 108/211 (51%), Positives = 134/211 (63%), Gaps = 17/211 (8%)
Frame = +2
Query: 119 SILEPIPLDLKKKMDTLTRSPAKRV--THHQKEICDSRD---KGVGSDKSRPGKKLHVLL 283
S LEPI LDLK LTR PAK + TH +K +C G + K +
Sbjct: 14 SSLEPIHLDLK-----LTRLPAKFLMKTHQKKLLCRVESLVLLGTAIKREDDQKDKLDPI 68
Query: 284 PYDMEMEILIRLPGKSLMRFLCVSKTWSSLIRSQRFVASYYA--AKPPRFTVTFTNGVLC 457
P+D+E+EIL RLP KSLM+F CVSK WS +IRSQRFV SYYA + RFTVTF+NG+
Sbjct: 69 PFDLEVEILTRLPAKSLMKFQCVSKMWSFIIRSQRFVDSYYALSSTRSRFTVTFSNGLFA 128
Query: 458 K--PKRLFIFSGEEEVTSSSSSSLVANLDMTIPSVTLNHSGFKYSSVHGFMAVNDGLKFI 631
+ +RLFIFS E SSSLVA LD+TIP VT+++ K S+HGF++ +G +FI
Sbjct: 129 EDDARRLFIFSSSYE--EEKSSSLVAKLDITIPVVTMDYRS-KCPSIHGFVSCCNGPQFI 185
Query: 632 ICNPSTGQVITFHCKATDTCLGYDPVGDQFK 724
+CNPST QVIT K LGYDPVG+QFK
Sbjct: 186 VCNPSTRQVITLPIKGPRASLGYDPVGEQFK 216
>gi|297851488|ref|XP_002893625.1| hypothetical protein ARALYDRAFT_336147
[Arabidopsis lyrata subsp. lyrata]
Length = 538
Score = 198 bits (501), Expect = 4e-048
Identities = 107/231 (46%), Positives = 141/231 (61%), Gaps = 9/231 (3%)
Frame = +1
Query: 736 LTSTYDHMHNPSLMCTHEVIRLGRGGRVVSRTQITSPPYHPITRGRCINGFIYYAAPVPA 915
LT + + HEV+ LG G ++T+P Y+ TR CINGF+Y+ A P
Sbjct: 222 LTQVSPYSYQEPDFLVHEVLTLGGGESSWIVKKVTTPVYYTATRKLCINGFVYFGAWTP- 280
Query: 916 ETPPTPVIVCFDVRYETILSFIPTPREVLFWQALTSLIDYKGKLAVVVPICQGRGSSFDR 1095
+ PVIVCFDVRYE LSFI P +V+ + + LI+YKGK A +V + + F
Sbjct: 281 RSRIDPVIVCFDVRYER-LSFIKAPMDVVCLEGDSILIEYKGKFASIV---RHPYADFHS 336
Query: 1096 FNLWILEDVTKQEWSKQTFELPLSLPFNIGMGKRMISQGTNKGGEIIFSPATLPDRAQPF 1275
F+LWILEDV +WSKQTF+ LPF++G+G +M S G NK GEIIF+P TL QPF
Sbjct: 337 FDLWILEDVKTHDWSKQTFQ----LPFSLGLGTKMTSPGINKAGEIIFAPKTLSRDVQPF 392
Query: 1276 YVFYFNPVTKSMRRVRIHGVADTEDFLSRYGLTGICAASFSPHHVDSIAFL 1428
Y+FY+N K MR+V + G+AD E F RYGL G C SP HV++ AF+
Sbjct: 393 YIFYYNVERKDMRKVMLKGIADDEQFRRRYGLAGNCYVHISPEHVENYAFV 443
Score = 154 bits (388), Expect = 5e-035
Identities = 103/229 (44%), Positives = 130/229 (56%), Gaps = 25/229 (10%)
Frame = +2
Query: 86 MKGKEHEKGS------RSILEPIPLDLKKKMDT---LTRSPAKRVTHHQKEIC-DSRDKG 235
MK ++ +KG S L+PIP LK + T L ++P K K +C + RD
Sbjct: 1 MKRRDDKKGRLCSISIPSKLDPIPFVLKMVLATAKFLNKTPQK------KHLCREERDIN 54
Query: 236 VGSDKSRPGKKLHVLLPYDMEMEILIRLPGKSLMRFLCVSKTWSSLIRSQRFVASYYA-- 409
+K K+ +P D+E+EIL RLP KSL++F CVSKTWSS+IRSQRF+ SYYA
Sbjct: 55 KYDEKDTSPSKVD-SIPLDLEVEILTRLPAKSLIKFQCVSKTWSSIIRSQRFIDSYYALS 113
Query: 410 --AKPPRFTVTFTNGVLCK--PKRLFIFSGEEEVTSSSSSSLVANLDMTIPSVTLNHSGF 577
+ RF + F+NG K KRLFIFS E SSSSLV NLDMTIPSVT+
Sbjct: 114 STMRSDRFIIAFSNGESAKREDKRLFIFSSSYE-GHESSSSLVTNLDMTIPSVTVICFS- 171
Query: 578 KYSSVHGFMAVNDGLKFIICNPSTGQVITFHCKATDTCLGYDPVGDQFK 724
+SVHG + F++CNP TG+V C T GYDPV QFK
Sbjct: 172 TCASVHGLIGSTRSGPFLVCNPCTGKVTMLPCSGAHTSFGYDPVDGQFK 220
>gi|15221502|ref|NP_174365.1| F-box domain-containing protein [Arabidopsis
thaliana]
Length = 399
Score = 170 bits (429), Expect = 8e-040
Identities = 106/242 (43%), Positives = 145/242 (59%), Gaps = 15/242 (6%)
Frame = +1
Query: 721 QALTLLTSTYDHMHNPSLMCTHEVIRLGRGGRVVSRTQITS----PPYHPITRGRCINGF 888
+AL L++S + N H V+ L + S QI PPY P+T CING
Sbjct: 167 KALALISSC---IPNKDSTVEHLVLTLKGDKKNYSWRQIQGNNNIPPYSPVTMRVCINGV 223
Query: 889 IYYAAPVPAETPPTPVIVCFDVRYETILSFIPTPREVLFWQALTSLIDYKGKLAVVVPIC 1068
+YY A P ++ VIVCFDVR E I +FI TP++V+ W + L++YKGKLA +V
Sbjct: 224 VYYGAWTPRQS-MNAVIVCFDVRSEKI-TFIKTPKDVVRWCNDSILMEYKGKLASIV--- 278
Query: 1069 QGRGSSFDRFNLWILEDVTKQEWSKQTFELPLSLPFNIGMGKRMISQGTNKGGEIIFSPA 1248
+ R S FD F+LW+LED+ KQEWSKQT E+PLS+ ++ M G NK GEII +P
Sbjct: 279 RNRYSRFDTFDLWVLEDIEKQEWSKQTCEIPLSV-WDSVENFNMSFPGINKFGEIILAPT 337
Query: 1249 TLPD-RAQPFYVFYFNPVTKSMRRVRIHGVADTEDFLSRYGL-TGICAASFSPHHVDSIA 1422
L + FY+FY++ TK +RRVR+ G+AD E+F YG+ +G C SP HV++I
Sbjct: 338 CLSGYHLRSFYIFYYHVETKKIRRVRLEGIADDENFRRCYGIGSGQCNVFISPEHVETIR 397
Query: 1423 FL 1428
FL
Sbjct: 398 FL 399
Score = 121 bits (302), Expect = 4e-025
Identities = 69/132 (52%), Positives = 91/132 (68%), Gaps = 6/132 (4%)
Frame = +2
Query: 281 LPYDMEMEILIRLPGKSLMRFLCVSKTWSSLIRSQRFVASYY--AAKPPRFTVTFTNGVL 454
+P+D+ +EIL RLP KSLM+F CVSK WSS+I +Q F+ S+Y ++ PRF V F+NG
Sbjct: 9 IPFDLTVEILTRLPAKSLMKFKCVSKLWSSIIHNQSFIDSFYSISSTRPRFIVAFSNGSF 68
Query: 455 --CKPKRLFIFSGEEEVTSSSSSSLVANLDMTIPSVTL-NHSGFKYSSVHGFMAVNDGLK 625
K KRLFIFS E SSSS++ NLD TIPS+T+ N+ + SV+GF+A + +
Sbjct: 69 PSDKEKRLFIFSSSHE-GHESSSSVITNLDTTIPSLTVSNNLASRCISVNGFIACSLYTR 127
Query: 626 FIICNPSTGQVI 661
F ICNPST QVI
Sbjct: 128 FTICNPSTRQVI 139
>gi|4926821|gb|AAD32931.1|AC004135_6 T17H7.6 [Arabidopsis thaliana]
Length = 502
Score = 164 bits (415), Expect = 3e-038
Identities = 104/245 (42%), Positives = 145/245 (59%), Gaps = 18/245 (7%)
Frame = +1
Query: 721 QALTLLTSTYDHMHNPSLMCTHEVIRLGRGGRVVSRTQITS----PPYHPITRGRCINGF 888
+AL L++S + N H V+ L + S QI PPY P+T CING
Sbjct: 167 KALALISSC---IPNKDSTVEHLVLTLKGDKKNYSWRQIQGNNNIPPYSPVTMRVCINGV 223
Query: 889 IYYAAPVPAETPPTPVIVCFDVRYETILSFIPTPREVLFWQALTSLIDYKGKLAVVVPIC 1068
+YY A P ++ VIVCFDVR E I +FI TP++V+ W + L++YKGKLA +V
Sbjct: 224 VYYGAWTPRQS-MNAVIVCFDVRSEKI-TFIKTPKDVVRWCNDSILMEYKGKLASIV--- 278
Query: 1069 QGRGSSFDRFNLWILEDVTKQEWSKQTFELPLSLPFNIGMGKRMISQGTNKGGEIIFSPA 1248
+ R S FD F+LW+LED+ KQEWSKQT E+PLS+ ++ M G NK GEII +P
Sbjct: 279 RNRYSRFDTFDLWVLEDIEKQEWSKQTCEIPLSV-WDSVENFNMSFPGINKFGEIILAPT 337
Query: 1249 TLPD-RAQPFYVFYFNPVTKSMRRVRIHGVADTEDFLSRYGL-TGICAASFSPHHVD--- 1413
L + FY+FY++ TK +RRVR+ G+AD E+F YG+ +G C SP H++
Sbjct: 338 CLSGYHLRSFYIFYYHVETKKIRRVRLEGIADDENFRRCYGIGSGQCNVFISPEHIEYKG 397
Query: 1414 SIAFL 1428
+AF+
Sbjct: 398 KVAFI 402
Score = 121 bits (302), Expect = 4e-025
Identities = 69/132 (52%), Positives = 91/132 (68%), Gaps = 6/132 (4%)
Frame = +2
Query: 281 LPYDMEMEILIRLPGKSLMRFLCVSKTWSSLIRSQRFVASYY--AAKPPRFTVTFTNGVL 454
+P+D+ +EIL RLP KSLM+F CVSK WSS+I +Q F+ S+Y ++ PRF V F+NG
Sbjct: 9 IPFDLTVEILTRLPAKSLMKFKCVSKLWSSIIHNQSFIDSFYSISSTRPRFIVAFSNGSF 68
Query: 455 --CKPKRLFIFSGEEEVTSSSSSSLVANLDMTIPSVTL-NHSGFKYSSVHGFMAVNDGLK 625
K KRLFIFS E SSSS++ NLD TIPS+T+ N+ + SV+GF+A + +
Sbjct: 69 PSDKEKRLFIFSSSHE-GHESSSSVITNLDTTIPSLTVSNNLASRCISVNGFIACSLYTR 127
Query: 626 FIICNPSTGQVI 661
F ICNPST QVI
Sbjct: 128 FTICNPSTRQVI 139
>gi|297851796|ref|XP_002893779.1| hypothetical protein ARALYDRAFT_890952
[Arabidopsis lyrata subsp. lyrata]
Length = 404
Score = 162 bits (409), Expect = 2e-037
Identities = 102/225 (45%), Positives = 132/225 (58%), Gaps = 13/225 (5%)
Frame = +1
Query: 763 NPSLMCTHEVIRL--GRGGRVVSRTQITSPPYHPITRGRCINGFIYYAAPVPAETPPTPV 936
+P+ H+V+ L G+G R + T + PY I+ CINGF+YY A +T PV
Sbjct: 183 DPNAHLKHKVLTLGDGQGWRHIKNTTL---PYMAISPNVCINGFLYYGAYCLTQT-RDPV 238
Query: 937 IVCFDVRYETILSFIPTPREVLFWQALTSLIDYKGKLAVVVPICQGRGSSFDRFNLWILE 1116
+VCFDVR E LSFI P VL W I+YKGKLA +V G SSFD LWILE
Sbjct: 239 MVCFDVRSEK-LSFIKAPPVVLQWGKEAVFIEYKGKLASIVGNTYGAVSSFD---LWILE 294
Query: 1117 DVTKQEWSKQTFELPLSLPFNIGMGKRMISQGTNKGGEIIFSPATLPDRAQPFYVFYFNP 1296
DV K EWSKQ P+S+ +G M GTN+ GEII +P+ L QPFY+FY+N
Sbjct: 295 DVEKHEWSKQKCVFPISVWDFFDLG-GMSFPGTNRAGEIIMAPSLLSVNLQPFYIFYYNV 353
Query: 1297 VTKSMRRVRIHGVADTEDFLSRYGLTGICAA--SFSPHHVDSIAF 1425
TK++RRVR+ G+ D+E+F YG A + + HV+SIAF
Sbjct: 354 ETKNIRRVRLLGIGDSEEFRRSYGFGEHAKAFVNIAHQHVESIAF 398
Score = 119 bits (298), Expect = 1e-024
Identities = 73/169 (43%), Positives = 101/169 (59%), Gaps = 13/169 (7%)
Frame = +2
Query: 245 DKSRPGK-KLHVLLPYDMEMEILIRLPGKSLMRFLCVSKTWSSLIRSQRFVASYY--AAK 415
D + P K L LP D++M IL RL KSL F CVSK WSS+IRS+ F+ S++ +AK
Sbjct: 8 DTTNPSKLDLLDSLPLDLKMAILTRLSAKSLKNFRCVSKMWSSIIRSRGFIDSFFSMSAK 67
Query: 416 PPRFTVTFTNGVLCKPKR----LFIFSGEEEVTSSSSSSLVANLDMTIPSVTLNHSGFKY 583
RF V+ N V +P+ F FS +E SSSSSSLV N +M +P+V+ +
Sbjct: 68 QSRFIVSLCNIVFGEPEEKLILFFSFSHDEGDESSSSSSLVPNFEMALPAVSFSFYSGSC 127
Query: 584 SSVHGFMAVNDGLKFIICNPSTGQVITFHCKATDTCL--GYDPVGDQFK 724
+S+HG + V + ++CNPST QV+ K T C+ GYDP+ DQ+K
Sbjct: 128 ASLHGILTVETEGQLMMCNPSTEQVV----KLTSDCIFVGYDPIDDQYK 172
>gi|297846034|ref|XP_002890898.1| hypothetical protein ARALYDRAFT_890639
[Arabidopsis lyrata subsp. lyrata]
Length = 237
Score = 153 bits (386), Expect = 8e-035
Identities = 78/151 (51%), Positives = 100/151 (66%), Gaps = 7/151 (4%)
Frame = +1
Query: 970 LSFIPTPREVLFWQALTSLIDYKGKLAVVVPICQGRGSSFDRFNLWILEDVTKQEWSKQT 1149
LSFI P +V+ W+ + LI+YKGKLA +V + + F+ F+LWILEDV + S QT
Sbjct: 92 LSFIKAPMDVISWEGESILIEYKGKLAFIV---RHPYADFESFDLWILEDVKTHDLSNQT 148
Query: 1150 FELPLSLPFNIGMGKRMISQGTNKGGEIIFSPATLPDRAQPFYVFYFNPVTKSMRRVRIH 1329
FE LPF++G+G M S GTNK GEIIF+P L QPFY+FY+N K MRRVR+
Sbjct: 149 FE----LPFSLGLGTTMTSPGTNKAGEIIFAPKALSPDVQPFYIFYYNVERKDMRRVRLL 204
Query: 1330 GVADTEDFLSRYGLTGICAASFSPHHVDSIA 1422
G+AD E+F SRYG C S SP H++SIA
Sbjct: 205 GIADYEEFRSRYGFANDCYVSISPEHIESIA 235
>gi|15223258|ref|NP_174543.1| putative F-box protein [Arabidopsis thaliana]
Length = 446
Score = 146 bits (366), Expect = 2e-032
Identities = 97/219 (44%), Positives = 120/219 (54%), Gaps = 10/219 (4%)
Frame = +1
Query: 784 HEVIRLGRGGRVVSRTQITSPPYHPITRGR-CINGFIYYAAPVPAETPPTPVIVCFDVRY 960
H+V LG GG + + + PY PI CING IYY A ++T PVIVCFDVR
Sbjct: 226 HKVWTLG-GGEGMRQIRGDLAPYRPILLPNVCINGVIYYGAHTLSQT-KDPVIVCFDVRS 283
Query: 961 ETILSFIPTPREVLFWQALTSLIDYKGKLAVVVPICQGRGSSFDRFNLWILEDVTKQEWS 1140
E LSFI P VL + LIDYKGKLA +V G F WILED K EWS
Sbjct: 284 EK-LSFITAPAVVLQSGMKSILIDYKGKLASIVR--NSCGGCISSFVFWILEDPKKHEWS 340
Query: 1141 KQTFELPLSLPFNIGMGKRMISQGTNKGGEIIFSPATLPDRAQPFYVFYFNPVTKSMRRV 1320
+Q+ + P SL +G R+ GTNK GEII +P L + FY+FY+N TK+MRRV
Sbjct: 341 RQSCDFPYSLWDYVG-NVRICFFGTNKAGEIIIAPMFLSRDVRSFYIFYYNVETKTMRRV 399
Query: 1321 RIHGVADTEDFLSRYGLTG---ICAASFSPHHVDSIAFL 1428
R+ G+ +F YG C + HV+SIAFL
Sbjct: 400 RLRGIGSDIEFRRSYGSENKLCNCHVRIAHQHVESIAFL 438
Score = 122 bits (304), Expect = 3e-025
Identities = 85/211 (40%), Positives = 117/211 (55%), Gaps = 23/211 (10%)
Frame = +2
Query: 113 SRSILEPIPLDLKKKMDTLTRSPAKRVTHHQKEICDSRDKGVGSDKSRPGKKLHVLLPYD 292
S S L+PIPLDL KM T+ + +H K D + + + P K LP D
Sbjct: 15 SASKLDPIPLDL--KMATVPTKSHMKKSHQNKLEEDEK------EDTNPSKLELDSLPLD 66
Query: 293 MEMEILIRLPGKSLMRFLCVSKTWSSLIRSQRFVASYYA--AKPPRFTVTFTNGVLCKPK 466
++M IL R+P KSLM+ CVSK WSS+IRS+ F+ SYYA +K RF V +N +P+
Sbjct: 67 LKMAILTRIPAKSLMKLRCVSKMWSSIIRSRGFIDSYYAISSKQSRFIVGLSNAAFNEPE 126
Query: 467 R--LFIFS-GEEEVTSSSSSSLVANLDMTIPS--VTLNHSGFKYSSVHGFMAVNDGLKFI 631
+ F+FS E+ SSSSSLV N +M +P L+HS +S HG +AV +
Sbjct: 127 KQLTFLFSFSHEDGEKSSSSSLVPNFEMAVPCSLAGLSHS---LASFHGILAVEGK---V 180
Query: 632 ICNPSTGQVITFHCKATDTCLGYDPVGDQFK 724
+CNP+T Q T +GYDP+ DQ+K
Sbjct: 181 MCNPNTEQFTTL--PVGTIFVGYDPIDDQYK 209
>gi|297846032|ref|XP_002890897.1| hypothetical protein ARALYDRAFT_473309
[Arabidopsis lyrata subsp. lyrata]
Length = 473
Score = 119 bits (297), Expect = 2e-024
Identities = 68/132 (51%), Positives = 91/132 (68%), Gaps = 6/132 (4%)
Frame = +2
Query: 281 LPYDMEMEILIRLPGKSLMRFLCVSKTWSSLIRSQRFVASYY--AAKPPRFTVTFTNGVL 454
+P D+ +EIL RLP KSL+RF CVSK WSS+I+SQ F+ S+Y ++ PR V FTNG+
Sbjct: 9 IPLDLTVEILTRLPAKSLLRFKCVSKLWSSIIQSQGFIDSFYSISSTRPRSIVAFTNGLF 68
Query: 455 CK--PKRLFIFSGEEEVTSSSSSSLVANLDMTIPSVTL-NHSGFKYSSVHGFMAVNDGLK 625
K KR FIFS +E SSSS++ NLD+TIPS+T+ N+ + SV+GF+A +
Sbjct: 69 AKDEDKRFFIFSSSQE-GHESSSSVINNLDITIPSLTVCNNPASRCVSVNGFVACSLNTG 127
Query: 626 FIICNPSTGQVI 661
+ICNPST QVI
Sbjct: 128 LMICNPSTRQVI 139
>gi|297846240|ref|XP_002891001.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 166
Score = 85 bits (208), Expect = 4e-014
Identities = 53/137 (38%), Positives = 78/137 (56%), Gaps = 8/137 (5%)
Frame = +2
Query: 167 LTRSPAKRVTHHQKEICDSRDKGVGSDKSRPGKKLHVLLPYDMEMEILIRLPGKSLMRFL 346
+T P+K H K+ ++ + +D + P K LP D++M IL R+P KSLM+
Sbjct: 27 MTTVPSK---SHMKKSHQNKLEEDENDTTNPSKL--DSLPLDLKMAILTRMPAKSLMKLR 81
Query: 347 CVSKTWSSLIRSQRFVASYYA--AKPPRFTVTFTNGVLCKP-KRLFIFSGEEEVTSSSSS 517
CVSK WSS+IRS+ F+ SYYA ++ RF V F+NGV P +RL F SS
Sbjct: 82 CVSKMWSSIIRSRGFIDSYYATSSRQSRFIVGFSNGVFGTPEERLTFFFSFSHDEGQESS 141
Query: 518 SLVANLDMTIPSVTLNH 568
SL+ +M +P+ + N+
Sbjct: 142 SLLPTFEMAVPTYSFNN 158
>gi|297840545|ref|XP_002888154.1| hypothetical protein ARALYDRAFT_893536
[Arabidopsis lyrata subsp. lyrata]
Length = 404
Score = 73 bits (177), Expect = 1e-010
Identities = 52/181 (28%), Positives = 86/181 (47%), Gaps = 12/181 (6%)
Frame = +2
Query: 203 QKEICDSRDKGVGSDKSRPGKKLHVLLPYDMEMEILIRLPGKSLMRFLCVSKTWSSLIRS 382
++E + ++ + S + +K V++P D+ EIL+RLP KS+ +F CVSK WSS+
Sbjct: 4 REEEAEDKEISIQSKEDESCRKFLVMIPLDLIHEILLRLPAKSVAKFRCVSKLWSSITTR 63
Query: 383 QRFVASYYAAKPPRFTVTFTNGVLCKPKRLFIFSGEEEVTSSSSSSLVANLDMTIPSVTL 562
F+ S+ + R + V + +RL + E + SS V P
Sbjct: 64 PDFIRSFVSQSSTRLCLFVC--VNTRDERLSCSIPQHENSDRSSYPHVERYRKNAPKFDY 121
Query: 563 NHSGFKYS-SVHGFMAVNDGL-KFIICNPSTGQVITF-----HCKATDTCLGYDPVGDQF 721
+ +YS SVHG + + D ++ NP+ Q +T +CLGYDPV ++
Sbjct: 122 HQ---RYSESVHGLIGLGDFCGNIVVWNPTMRQHVTLPKPEPRVPCVCSCLGYDPVEGKY 178
Query: 722 K 724
K
Sbjct: 179 K 179
>gi|15241905|ref|NP_201072.1| putative F-box protein [Arabidopsis thaliana]
Length = 379
Score = 70 bits (169), Expect = 1e-009
Identities = 40/93 (43%), Positives = 55/93 (59%), Gaps = 4/93 (4%)
Frame = +2
Query: 281 LPYDMEMEILIRLPGKSLMRFLCVSKTWSSLIRSQRFVASYYAAK----PPRFTVTFTNG 448
+P D+ +EIL +LP KSLMRF CVSK WSSLIRS+ F Y K PPR ++ +
Sbjct: 41 IPLDLLIEILTKLPAKSLMRFKCVSKLWSSLIRSRFFSNCYLTVKTPRRPPRLYMSLVDH 100
Query: 449 VLCKPKRLFIFSGEEEVTSSSSSSLVANLDMTI 547
+LC + + E + SSSSS+ ++TI
Sbjct: 101 LLCNSLMVCHYPCESVLLSSSSSAESLEQNLTI 133
>gi|297793847|ref|XP_002864808.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 496
Score = 66 bits (160), Expect = 1e-008
Identities = 37/84 (44%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Frame = +2
Query: 281 LPYDMEMEILIRLPGKSLMRFLCVSKTWSSLIRSQRFVASYYAA----KPPRFTVTFTNG 448
+P D+++EILIRLP KSLMRF CVSK W SLIRS+ F Y +PPR ++ +
Sbjct: 87 IPLDLQIEILIRLPAKSLMRFKCVSKLWFSLIRSRCFSNCYLKVASPPRPPRLYMSLVDH 146
Query: 449 VLCKPKRLFIFSGEEEVTSSSSSS 520
+ C + E + S SSSS
Sbjct: 147 IQCNSMEVCYNPRESVLLSLSSSS 170
>gi|297834148|ref|XP_002884956.1| hypothetical protein ARALYDRAFT_897547
[Arabidopsis lyrata subsp. lyrata]
Length = 280
Score = 64 bits (154), Expect = 6e-008
Identities = 35/107 (32%), Positives = 57/107 (53%)
Frame = +2
Query: 260 GKKLHVLLPYDMEMEILIRLPGKSLMRFLCVSKTWSSLIRSQRFVASYYAAKPPRFTVTF 439
G KL +P D+ +EIL+RLP KS++RF CVSK WSS+I + F+ S+ R ++
Sbjct: 8 GTKLSSWIPLDVTIEILLRLPAKSVVRFRCVSKLWSSMISTPNFIKSFAVHSSARPSILS 67
Query: 440 TNGVLCKPKRLFIFSGEEEVTSSSSSSLVANLDMTIPSVTLNHSGFK 580
+ + KR+F ++ + +S++ DM I + H K
Sbjct: 68 CSVKKEEGKRVFFSFPHQQDPKNPYTSILDKFDMIIAKTSPIHPSMK 114
>gi|297793843|ref|XP_002864806.1| hypothetical protein ARALYDRAFT_358465
[Arabidopsis lyrata subsp. lyrata]
Length = 475
Score = 62 bits (149), Expect = 2e-007
Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Frame = +2
Query: 281 LPYDMEMEILIRLPGKSLMRFLCVSKTWSSLIR----SQRFVASYYAAKPPRFTVTFTNG 448
+P D+++EILIRLP KSLMRF CVSK W SLIR S R++ + PR ++ +
Sbjct: 14 IPLDLQIEILIRLPAKSLMRFKCVSKLWFSLIRCRYFSNRYLTVASPPRAPRLYMSLVDH 73
Query: 449 VLCKPKRLFIFSGEEEVTSSSSSS 520
+ C + E + S SSSS
Sbjct: 74 IQCNSMEVCYNPRESVLLSLSSSS 97
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,313,363,328,120
Number of Sequences: 15229318
Number of Extensions: 1313363328120
Number of Successful Extensions: 373990951
Number of sequences better than 0.0: 0
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