BLASTX 7.6.2
Query= UN10775 /QuerySize=1018
(1017 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G78630.1 | Symbols: emb1473 | emb1473 (embryo ... 444 5e-125
TAIR9_protein||AT3G01790.1 | Symbols: | ribosomal protein L13 f... 81 8e-016
TAIR9_protein||AT3G01790.2 | Symbols: | ribosomal protein L13 f... 81 8e-016
TAIR9_protein||AT5G48760.1 | Symbols: | 60S ribosomal protein L... 49 5e-006
TAIR9_protein||AT5G48760.2 | Symbols: | 60S ribosomal protein L... 49 5e-006
>TAIR9_protein||AT1G78630.1 | Symbols: emb1473 | emb1473 (embryo defective
1473); structural constituent of ribosome | chr1:29575997-29577406
FORWARD
Length = 242
Score = 444 bits (1141), Expect = 5e-125
Identities = 226/247 (91%), Positives = 231/247 (93%), Gaps = 7/247 (2%)
Frame = +2
Query: 83 MAVLCSSSTVIL--PSVKPSGSNRRSPFLGFFSLTAISKPSVRVGIYANTKRGL*VKCEA 256
MAVLCSSSTVIL SVK SGS R+SPFLG FSLTAISKPSVRVGIYAN+KRGL VKCEA
Sbjct: 1 MAVLCSSSTVILSSSSVKSSGSERKSPFLG-FSLTAISKPSVRVGIYANSKRGLQVKCEA 59
Query: 257 EEQGTTATTTSLVPANQRWMFDEEEANGPDIWNTTWCPKASDHVNTDKPWYVVDATDKIL 436
E TTTSLVPANQRWMFDEEEANGPDIWNTTW PKASDHVNTDKPW+VVDATDKIL
Sbjct: 60 E----PTTTTSLVPANQRWMFDEEEANGPDIWNTTWYPKASDHVNTDKPWFVVDATDKIL 115
Query: 437 GRLASTIANHIRGKNLASYTPSFDMGAFVIVVNAEKVAVSGKKRNQKLYRRHSGRPGGMT 616
GRLASTIANHIRGKNLASYTPS DMGAFVIVVNAEKVAVSGKKRNQKLYRRHSGRPGGMT
Sbjct: 116 GRLASTIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQKLYRRHSGRPGGMT 175
Query: 617 VETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPLDLPIRDK 796
VETFDQLQQRIPERI+EHAVRGMLPKGRLGRALFNHLKVYKGP+HPHEAQKPLDLPIRDK
Sbjct: 176 VETFDQLQQRIPERIVEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPLDLPIRDK 235
Query: 797 RIQLQK* 817
RIQLQK*
Sbjct: 236 RIQLQK* 242
>TAIR9_protein||AT3G01790.1 | Symbols: | ribosomal protein L13 family protein |
chr3:283880-285583 REVERSE
Length = 206
Score = 81 bits (199), Expect = 8e-016
Identities = 44/125 (35%), Positives = 68/125 (54%), Gaps = 1/125 (0%)
Frame = +2
Query: 404 WYVVDATDKILGRLASTIANHIRGKNLASYTPSFDMGAFVIVVNAEKVAVSGKKRNQKLY 583
W V DA ++LGRLAS I+ ++ K+ +Y P+ D G IV+NA+++ +G+K K Y
Sbjct: 32 WRVFDARGQVLGRLASQISTVLQAKDKPTYCPNRDDGDICIVLNAKEIGFTGRKLTDKFY 91
Query: 584 RRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPEHPHEA 763
R H+G G + + + P +I AV MLP L L++++G EHP
Sbjct: 92 RWHTGYIGHLKERSLKDQMAKDPTEVIRKAVWRMLPSNNLRDDRDRKLRIFEGGEHPF-G 150
Query: 764 QKPLD 778
KPL+
Sbjct: 151 DKPLE 155
>TAIR9_protein||AT3G01790.2 | Symbols: | ribosomal protein L13 family protein |
chr3:283880-285583 REVERSE
Length = 206
Score = 81 bits (199), Expect = 8e-016
Identities = 44/125 (35%), Positives = 68/125 (54%), Gaps = 1/125 (0%)
Frame = +2
Query: 404 WYVVDATDKILGRLASTIANHIRGKNLASYTPSFDMGAFVIVVNAEKVAVSGKKRNQKLY 583
W V DA ++LGRLAS I+ ++ K+ +Y P+ D G IV+NA+++ +G+K K Y
Sbjct: 32 WRVFDARGQVLGRLASQISTVLQAKDKPTYCPNRDDGDICIVLNAKEIGFTGRKLTDKFY 91
Query: 584 RRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPEHPHEA 763
R H+G G + + + P +I AV MLP L L++++G EHP
Sbjct: 92 RWHTGYIGHLKERSLKDQMAKDPTEVIRKAVWRMLPSNNLRDDRDRKLRIFEGGEHPF-G 150
Query: 764 QKPLD 778
KPL+
Sbjct: 151 DKPLE 155
>TAIR9_protein||AT5G48760.1 | Symbols: | 60S ribosomal protein L13A (RPL13aD) |
chr5:19771315-19772686 REVERSE
Length = 207
Score = 49 bits (115), Expect = 5e-006
Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 1/125 (0%)
Frame = +2
Query: 440 RLASTIANHIRGKNLASYTPSFDMGAFVIVVNAEKVAVSGKKRNQKLYRRHSGRPGGMTV 619
R+ +H+ G+ + G V++V E++ +SG QK+ R T
Sbjct: 11 RVVVDARHHMLGRLASITAKELLNGQKVVIVRCEEICLSGGLVRQKMKYMRFLRKRMNTK 70
Query: 620 ETFDQLQQRIPERIIEHAVRGMLP-KGRLGRALFNHLKVYKGPEHPHEAQKPLDLPIRDK 796
+ + R P +I VRGM+P K + G A LKVY+G P++ K + +P K
Sbjct: 71 PSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPTPYDKIKRMVIPDALK 130
Query: 797 RIQLQ 811
++LQ
Sbjct: 131 VLRLQ 135
>TAIR9_protein||AT5G48760.2 | Symbols: | 60S ribosomal protein L13A (RPL13aD) |
chr5:19771315-19772686 REVERSE
Length = 207
Score = 49 bits (115), Expect = 5e-006
Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 1/125 (0%)
Frame = +2
Query: 440 RLASTIANHIRGKNLASYTPSFDMGAFVIVVNAEKVAVSGKKRNQKLYRRHSGRPGGMTV 619
R+ +H+ G+ + G V++V E++ +SG QK+ R T
Sbjct: 11 RVVVDARHHMLGRLASITAKELLNGQKVVIVRCEEICLSGGLVRQKMKYMRFLRKRMNTK 70
Query: 620 ETFDQLQQRIPERIIEHAVRGMLP-KGRLGRALFNHLKVYKGPEHPHEAQKPLDLPIRDK 796
+ + R P +I VRGM+P K + G A LKVY+G P++ K + +P K
Sbjct: 71 PSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPTPYDKIKRMVIPDALK 130
Query: 797 RIQLQ 811
++LQ
Sbjct: 131 VLRLQ 135
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,924,865,478
Number of Sequences: 33410
Number of Extensions: 5924865478
Number of Successful Extensions: 216150274
Number of sequences better than 0.0: 0
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