BLASTX 7.6.2
Query= UN10820 /QuerySize=524
(523 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|7209506|dbj|BAA92248.1| pollen coat protein class A no. 1 [Br... 127 8e-028
gi|3395460|emb|CAA06464.1| pollen coat protein, class 'A', 1 (PC... 117 6e-025
gi|1653972|emb|CAA65766.1| pollen coat protein [Brassica olerace... 65 3e-009
gi|3062795|dbj|BAA25682.1| PCP-1 family [Brassica rapa] 64 8e-009
gi|7649936|dbj|BAA94096.1| SLR1 binding pollen coat protein [Bra... 63 1e-008
gi|7649804|dbj|BAA94095.1| SLR1 binding pollen coat protein [Bra... 63 2e-008
gi|15076829|gb|AAK82951.1|AF198612_1 pollen coat protein class A... 62 4e-008
gi|1263100|emb|CAA65767.1| pollen coat protein [Brassica olerace... 60 1e-007
>gi|7209506|dbj|BAA92248.1| pollen coat protein class A no. 1 [Brassica rapa]
Length = 81
Score = 127 bits (318), Expect = 8e-028
Identities = 61/81 (75%), Positives = 67/81 (82%), Gaps = 2/81 (2%)
Frame = -2
Query: 492 MKNAFKLSLIGFVMLTILLFGEMVIAQKGKPCYSKKMG-TCETKSCKAYCVKKHKKDL-F 319
MKN KLSLIGF MLT+LLFGE VIAQKGKPCYS++ TCE K CKA CVKKHKK L F
Sbjct: 1 MKNTVKLSLIGFFMLTVLLFGETVIAQKGKPCYSEEPDKTCEVKRCKANCVKKHKKILAF 60
Query: 318 STCITEKDGTTYCRCQYPCPP 256
+TCI EK+G T+CRCQYPCPP
Sbjct: 61 TTCIKEKNGNTFCRCQYPCPP 81
>gi|3395460|emb|CAA06464.1| pollen coat protein, class 'A', 1 (PCP-A1) [Brassica
oleracea var. alboglabra]
Length = 81
Score = 117 bits (293), Expect = 6e-025
Identities = 57/81 (70%), Positives = 63/81 (77%), Gaps = 2/81 (2%)
Frame = -2
Query: 492 MKNAFKLSLIGFVMLTILLFGEMVIAQKGKPCYSKKMG-TCETKSCKAYCVKKHKKDL-F 319
MKN KLSLIGFVMLT+LL GE VIAQK KPCYS++ TCE CKA CVKKHKK L F
Sbjct: 1 MKNTVKLSLIGFVMLTVLLLGETVIAQKRKPCYSQEPDKTCEVNRCKANCVKKHKKILAF 60
Query: 318 STCITEKDGTTYCRCQYPCPP 256
++CI E +G YCRCQYPCPP
Sbjct: 61 TSCIKENNGNMYCRCQYPCPP 81
>gi|1653972|emb|CAA65766.1| pollen coat protein [Brassica oleracea var.
alboglabra]
Length = 84
Score = 65 bits (158), Expect = 3e-009
Identities = 40/84 (47%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Frame = -2
Query: 492 MKNAFKLSLIGFVMLTILLFGEMVIAQKGK---PC---YSKKMGTCETKSCKAYCVKKHK 331
MK AFK LIGF ML I LFGE IAQ+ K C + GTC C+A CVK+H
Sbjct: 1 MKVAFKPWLIGFFMLAIFLFGETAIAQEKKTDNQCNLPLINQSGTCAANQCQAACVKRH- 59
Query: 330 KDLFSTCITEKDGTTYCRCQYPCP 259
KD C T D C C Y CP
Sbjct: 60 KDGVGKCTTNPDKKMRCICFYLCP 83
>gi|3062795|dbj|BAA25682.1| PCP-1 family [Brassica rapa]
Length = 83
Score = 64 bits (154), Expect = 8e-009
Identities = 38/84 (45%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Frame = -2
Query: 492 MKNAFKLSLIGFVMLTILLFGEMVIAQKGKPC-------YSKKMGTCETKSCKAYCVKKH 334
MK ++ SLIGFVMLTILL G + AQKG P Y G C CKA C K
Sbjct: 1 MKIYYRSSLIGFVMLTILLLGVVANAQKGGPVRKQCVEQYPDPNGKCVIDQCKAQCAKNR 60
Query: 333 KKDLFSTCITEKDGTTYCRCQYPC 262
K L + CI G CRC Y C
Sbjct: 61 KGGL-ARCIDTGKGHMQCRCDYHC 83
>gi|7649936|dbj|BAA94096.1| SLR1 binding pollen coat protein [Brassica juncea]
Length = 83
Score = 63 bits (152), Expect = 1e-008
Identities = 38/84 (45%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Frame = -2
Query: 492 MKNAFKLSLIGFVMLTILLFGEMVIAQKGKPC-------YSKKMGTCETKSCKAYCVKKH 334
MK ++ SLIG VMLTILL G +V AQKG P Y G C CKA C K
Sbjct: 1 MKIYYRSSLIGLVMLTILLLGVVVNAQKGGPVRKQCVEQYPDPNGKCVIDQCKAQCAKNR 60
Query: 333 KKDLFSTCITEKDGTTYCRCQYPC 262
K L + CI G CRC Y C
Sbjct: 61 KGGL-ARCIDTGKGHMQCRCDYHC 83
>gi|7649804|dbj|BAA94095.1| SLR1 binding pollen coat protein [Brassica napus]
Length = 83
Score = 63 bits (151), Expect = 2e-008
Identities = 38/84 (45%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Frame = -2
Query: 492 MKNAFKLSLIGFVMLTILLFGEMVIAQKGKPC-------YSKKMGTCETKSCKAYCVKKH 334
MK ++ SLIG VMLTILL G +V AQKG P Y G C CKA C K
Sbjct: 1 MKIYYRSSLIGLVMLTILLLGVVVNAQKGGPVRKQCVEQYPDPNGKCVIGQCKAQCAKNR 60
Query: 333 KKDLFSTCITEKDGTTYCRCQYPC 262
K L + CI G CRC Y C
Sbjct: 61 KGGL-ARCIDTGKGHMQCRCDYHC 83
>gi|15076829|gb|AAK82951.1|AF198612_1 pollen coat protein class A no. 2
precursor [Brassica napus]
Length = 83
Score = 62 bits (148), Expect = 4e-008
Identities = 37/84 (44%), Positives = 41/84 (48%), Gaps = 8/84 (9%)
Frame = -2
Query: 492 MKNAFKLSLIGFVMLTILLFGEMVIAQKGKPC-------YSKKMGTCETKSCKAYCVKKH 334
MK ++ SLIG VMLTILL G + AQKG P Y G C CKA C K
Sbjct: 1 MKIYYRSSLIGLVMLTILLLGVVANAQKGGPVRKQCVEQYPDPNGKCVIDQCKAQCAKNR 60
Query: 333 KKDLFSTCITEKDGTTYCRCQYPC 262
K L + CI G CRC Y C
Sbjct: 61 KGGL-ARCIDTGKGHMQCRCDYHC 83
>gi|1263100|emb|CAA65767.1| pollen coat protein [Brassica oleracea var.
alboglabra]
Length = 80
Score = 60 bits (144), Expect = 1e-007
Identities = 38/81 (46%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Frame = -2
Query: 492 MKNAFKLSLIGFVMLTILLFG---EMVIAQKGKPCYSKKMGTCETKSCKAYCVKKHKKDL 322
MK AFK LIGF ML I LFG E Q P +K GTC C+A CVK+H KD
Sbjct: 1 MKVAFKPWLIGFFMLAIFLFGFSEEKTDNQCNLPLINKS-GTCAANQCQAACVKRH-KDG 58
Query: 321 FSTCITEKDGTTYCRCQYPCP 259
C T D C C Y CP
Sbjct: 59 VGKCTTNPDKKMRCVCFYLCP 79
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,313,363,328,120
Number of Sequences: 15229318
Number of Extensions: 1313363328120
Number of Successful Extensions: 373990951
Number of sequences better than 0.0: 0
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