BLASTX 7.6.2
Query= UN10836 /QuerySize=1412
(1411 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G71840.1 | Symbols: | transducin family prote... 446 2e-125
TAIR9_protein||AT5G08390.1 | Symbols: | FUNCTIONS IN: molecular... 114 2e-025
TAIR9_protein||AT5G23430.1 | Symbols: | transducin family prote... 111 2e-024
TAIR9_protein||AT5G23430.2 | Symbols: | transducin family prote... 111 2e-024
TAIR9_protein||AT1G61210.1 | Symbols: | WD-40 repeat family pro... 109 4e-024
TAIR9_protein||AT1G11160.1 | Symbols: | nucleotide binding | ch... 79 8e-015
TAIR9_protein||AT5G52820.1 | Symbols: | WD-40 repeat family pro... 64 2e-010
TAIR9_protein||AT1G15440.1 | Symbols: | transducin family prote... 56 4e-008
TAIR9_protein||AT1G15440.2 | Symbols: | transducin family prote... 56 4e-008
TAIR9_protein||AT5G67320.1 | Symbols: HOS15 | HOS15 (high expres... 50 2e-006
TAIR9_protein||AT1G18080.1 | Symbols: ATARCA, RACK1A_AT | ATARCA... 49 7e-006
TAIR9_protein||AT1G62020.1 | Symbols: | coatomer protein comple... 49 9e-006
TAIR9_protein||AT3G18130.1 | Symbols: RACK1C_AT | RACK1C_AT (REC... 49 9e-006
>TAIR9_protein||AT1G71840.1 | Symbols: | transducin family protein / WD-40
repeat family protein | chr1:27022424-27024380 FORWARD
Length = 408
Score = 446 bits (1146), Expect = 2e-125
Identities = 212/242 (87%), Positives = 223/242 (92%)
Frame = -1
Query: 1111 PLYPTLVATGGGDDKAFLWKIGNGDWAAELLGHKDSVSSLAFSYDGQLVASGGLDGVVQI 932
P TLVATGGGDDKAFLWKIGNGDWAAEL GHKDSVS LAFSYDGQL+ASGGLDGVVQI
Sbjct: 80 PTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYDGQLLASGGLDGVVQI 139
Query: 931 FDASSGTLKCVLDGPGGGIEWVKWHPRGHVVLAGSEDCSMWMWNADKEAYLNMFSGHNQS 752
FDASSGTLKCVLDGPG GIEWV+WHPRGH+VLAGSEDCS+WMWNADKEAYLNMFSGHN +
Sbjct: 140 FDASSGTLKCVLDGPGAGIEWVRWHPRGHIVLAGSEDCSLWMWNADKEAYLNMFSGHNLN 199
Query: 751 VTCGDFTPDGKLICTGSDDASLIVWNPKSCESIHVVKGHPYHTEGLICLDINSNSSLAIS 572
VTCGDFTPDGKLICTGSDDASLIVWNPK+CESIH+VKGHPYHTEGL CLDINSNSSLAIS
Sbjct: 200 VTCGDFTPDGKLICTGSDDASLIVWNPKTCESIHIVKGHPYHTEGLTCLDINSNSSLAIS 259
Query: 571 GSKDGSVHIVNIVTGKVVSSLTSHTESVECVKFSPSSATIPMAATGWDGQEACHLGSSHS 392
GSKDGSVHIVNIVTGKVVSSL SHT+SVECVKFSPSSATIP+AATG ++ HS
Sbjct: 260 GSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKLIIWDLQHS 319
Query: 391 TP 386
TP
Sbjct: 320 TP 321
Score = 161 bits (406), Expect = 1e-039
Identities = 73/84 (86%), Positives = 81/84 (96%)
Frame = -3
Query: 383 FICDHAEGVTCVTWIGTSKYLATGCADGTVSIWDSLLGNCVHTYHGHQDTVQAVSVSTNT 204
FIC+H EGVT +TWIGTSKYLATGCA+GTVSIWDSLLGNCVHTYHGHQD VQA+SVSTNT
Sbjct: 323 FICEHEEGVTSLTWIGTSKYLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVSTNT 382
Query: 203 DFIVSVSVDNTARVYDTSEFQNKM 132
DFIVSVSVDNTARV+++SEFQNK+
Sbjct: 383 DFIVSVSVDNTARVFESSEFQNKV 406
Score = 121 bits (302), Expect = 1e-027
Identities = 60/80 (75%), Positives = 69/80 (86%), Gaps = 5/80 (6%)
Frame = -2
Query: 1347 SNTEMNNPAMEEEEEEGDVFLGESDVLHEIDVDGEDLPDAYDEDDNDNNNDDDEVFDEND 1168
+NTEMNN AM EEE+EG++FLGESDVL EIDVD EDLP+A D+D+ +DD E FDEND
Sbjct: 6 NNTEMNNLAM-EEEDEGEIFLGESDVLREIDVDEEDLPEA----DDDDMDDDGEQFDEND 60
Query: 1167 DSIHTFTGHKGELYALACSP 1108
DS+HTFTGHKGELYALACSP
Sbjct: 61 DSVHTFTGHKGELYALACSP 80
>TAIR9_protein||AT5G08390.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING
ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like
(InterPro:IPR011046), WD40 repeat, region (InterPro:IPR017986),
WD40/YVTN repeat-like (InterPro:IPR015943), WD40 repeat
(InterPro:IPR001680); BEST Arabidopsis thaliana protein match is:
transducin family protein / WD-40 repeat family protein
(TAIR:AT5G23430.1); Has 84267 Blast hits to 30722 proteins in 748
species: Archae - 68; Bacteria - 7813; Metazoa - 39755; Fungi - 16342;
Plants - 8110; Viruses - 6; Other Eukaryotes - 12173 (source: NCBI
BLink). | chr5:2701448-2706910 FORWARD
Length = 840
Score = 114 bits (284), Expect = 2e-025
Identities = 64/216 (29%), Positives = 108/216 (50%), Gaps = 5/216 (2%)
Frame = -1
Query: 1096 LVATGGGDDKAFLWKIGNGDWAAELLGHKDSVSSLAFSYDGQLVASGGLDGVVQIFDASS 917
++ TGG D K LW IG + L GH + S+ F LVA+G G ++++D
Sbjct: 31 VLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEE 90
Query: 916 GTLKCVLDGPGGGIEWVKWHPRGHVVLAGSEDCSMWMWNADKEAYLNMFSGHNQSVTCGD 737
+ L G V +HP G +GS D ++ +W+ K+ ++ + GH + V
Sbjct: 91 AKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLR 150
Query: 736 FTPDGKLICTGSDDASLIVWNPKSCESIHVVKGHPYHTEGLI-CLDINSNSSLAISGSKD 560
FTPDG+ I +G +D + VW+ + + +H K H EG I LD + + L +GS D
Sbjct: 151 FTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSH----EGKIQSLDFHPHEFLLATGSAD 206
Query: 559 GSVHIVNIVTGKVVSSLTSHTESVECVKFSPSSATI 452
+V ++ T +++ S + T V C+ F+P ++
Sbjct: 207 KTVKFWDLETFELIGSGGTETTGVRCLTFNPDGKSV 242
>TAIR9_protein||AT5G23430.1 | Symbols: | transducin family protein / WD-40
repeat family protein | chr5:7894073-7899862 REVERSE
Length = 838
Score = 111 bits (275), Expect = 2e-024
Identities = 63/216 (29%), Positives = 106/216 (49%), Gaps = 5/216 (2%)
Frame = -1
Query: 1096 LVATGGGDDKAFLWKIGNGDWAAELLGHKDSVSSLAFSYDGQLVASGGLDGVVQIFDASS 917
++ TGG D K LW IG + L GH + S+ F LVA+G G ++++D
Sbjct: 31 VLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEE 90
Query: 916 GTLKCVLDGPGGGIEWVKWHPRGHVVLAGSEDCSMWMWNADKEAYLNMFSGHNQSVTCGD 737
+ L G V +HP G +GS D ++ +W+ K+ ++ + GH + V
Sbjct: 91 AKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLR 150
Query: 736 FTPDGKLICTGSDDASLIVWNPKSCESIHVVKGHPYHTEGLI-CLDINSNSSLAISGSKD 560
FTPDG+ + +G +D + VW+ + + + K H EG I LD + + L +GS D
Sbjct: 151 FTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSH----EGQIQSLDFHPHEFLLATGSAD 206
Query: 559 GSVHIVNIVTGKVVSSLTSHTESVECVKFSPSSATI 452
+V ++ T +++ S T V C+ F+P T+
Sbjct: 207 RTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTV 242
Score = 71 bits (173), Expect = 1e-012
Identities = 40/144 (27%), Positives = 65/144 (45%), Gaps = 1/144 (0%)
Frame = -1
Query: 1090 ATGGGDDKAFLWKIGNGDWAAELLGHKDSVSSLAFSYDGQLVASGGLDGVVQIFDASSGT 911
A+G D +W I GH V+ L F+ DG+ V SGG D +V+++D ++G
Sbjct: 117 ASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGK 176
Query: 910 LKCVLDGPGGGIEWVKWHPRGHVVLAGSEDCSMWMWNADKEAYLNMFSGHNQSVTCGDFT 731
L G I+ + +HP ++ GS D ++ W+ + + V C F
Sbjct: 177 LLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFN 236
Query: 730 PDGK-LICTGSDDASLIVWNPKSC 662
PDGK ++C + + W P C
Sbjct: 237 PDGKTVLCGLQESLKIFSWEPIRC 260
>TAIR9_protein||AT5G23430.2 | Symbols: | transducin family protein / WD-40
repeat family protein | chr5:7894073-7899862 REVERSE
Length = 837
Score = 111 bits (275), Expect = 2e-024
Identities = 63/216 (29%), Positives = 106/216 (49%), Gaps = 5/216 (2%)
Frame = -1
Query: 1096 LVATGGGDDKAFLWKIGNGDWAAELLGHKDSVSSLAFSYDGQLVASGGLDGVVQIFDASS 917
++ TGG D K LW IG + L GH + S+ F LVA+G G ++++D
Sbjct: 31 VLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEE 90
Query: 916 GTLKCVLDGPGGGIEWVKWHPRGHVVLAGSEDCSMWMWNADKEAYLNMFSGHNQSVTCGD 737
+ L G V +HP G +GS D ++ +W+ K+ ++ + GH + V
Sbjct: 91 AKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLR 150
Query: 736 FTPDGKLICTGSDDASLIVWNPKSCESIHVVKGHPYHTEGLI-CLDINSNSSLAISGSKD 560
FTPDG+ + +G +D + VW+ + + + K H EG I LD + + L +GS D
Sbjct: 151 FTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSH----EGQIQSLDFHPHEFLLATGSAD 206
Query: 559 GSVHIVNIVTGKVVSSLTSHTESVECVKFSPSSATI 452
+V ++ T +++ S T V C+ F+P T+
Sbjct: 207 RTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTV 242
Score = 71 bits (173), Expect = 1e-012
Identities = 40/144 (27%), Positives = 65/144 (45%), Gaps = 1/144 (0%)
Frame = -1
Query: 1090 ATGGGDDKAFLWKIGNGDWAAELLGHKDSVSSLAFSYDGQLVASGGLDGVVQIFDASSGT 911
A+G D +W I GH V+ L F+ DG+ V SGG D +V+++D ++G
Sbjct: 117 ASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGK 176
Query: 910 LKCVLDGPGGGIEWVKWHPRGHVVLAGSEDCSMWMWNADKEAYLNMFSGHNQSVTCGDFT 731
L G I+ + +HP ++ GS D ++ W+ + + V C F
Sbjct: 177 LLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFN 236
Query: 730 PDGK-LICTGSDDASLIVWNPKSC 662
PDGK ++C + + W P C
Sbjct: 237 PDGKTVLCGLQESLKIFSWEPIRC 260
>TAIR9_protein||AT1G61210.1 | Symbols: | WD-40 repeat family protein / katanin
p80 subunit, putative | chr1:22564785-22571555 FORWARD
Length = 1181
Score = 109 bits (272), Expect = 4e-024
Identities = 62/225 (27%), Positives = 107/225 (47%), Gaps = 3/225 (1%)
Frame = -1
Query: 1126 CIGM*PLYPTLVATGGGDDKAFLWKIGNGDWAAELLGHKDSVSSLAFSYDGQLVASGGLD 947
C+ + L TGG D K LW IG L GH +V S+AF LV +G
Sbjct: 20 CLSIGKKTSRLFITGGDDYKVNLWAIGKPTSLMSLCGHTSAVDSVAFDSAEVLVLAGASS 79
Query: 946 GVVQIFDASSGTLKCVLDGPGGGIEWVKWHPRGHVVLAGSEDCSMWMWNADKEAYLNMFS 767
GV++++D + G V++HP G + +GS D ++ +W+ K+ + +
Sbjct: 80 GVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYK 139
Query: 766 GHNQSVTCGDFTPDGKLICTGSDDASLIVWNPKSCESIHVVKGHPYHTEGLICLDINSNS 587
GH++ ++ FTPDG+ + +G D + VW+ + + +H K +H + LD +
Sbjct: 140 GHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFK---FHEGPIRSLDFHPLE 196
Query: 586 SLAISGSKDGSVHIVNIVTGKVVSSLTSHTESVECVKFSPSSATI 452
L +GS D +V ++ T +++ S V +KF P T+
Sbjct: 197 FLLATGSADRTVKFWDLETFELIGSTRPEATGVRSIKFHPDGRTL 241
>TAIR9_protein||AT1G11160.1 | Symbols: | nucleotide binding |
chr1:3733406-3739363 FORWARD
Length = 1022
Score = 79 bits (192), Expect = 8e-015
Identities = 45/188 (23%), Positives = 89/188 (47%), Gaps = 4/188 (2%)
Frame = -1
Query: 1027 ELLGHKDSVSSLAF-SYDGQLVASGGLDGVVQIFDASSGTLKCVLDGPGGGIEWVKWHPR 851
E + H +V+ L+ +L+ +GG D V ++ T L G ++ V ++
Sbjct: 10 EFVAHSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTSPMSLCGHTSPVDSVAFNSE 69
Query: 850 GHVVLAGSEDCSMWMWNADKEAYLNMFSGHNQSVTCGDFTPDGKLICTGSDDASLIVWNP 671
+VLAG+ + +W+ ++ + F+GH + + +F P G+ + +GS D +L VW+
Sbjct: 70 EVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDT 129
Query: 670 KSCESIHVVKGHPYHTEGLICLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSLTSHTES 491
+ I KG HT G+ ++ + + +SG D V + ++ GK++ H
Sbjct: 130 RKKGCIQTYKG---HTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGP 186
Query: 490 VECVKFSP 467
+ + F P
Sbjct: 187 IRSLDFHP 194
Score = 68 bits (164), Expect = 1e-011
Identities = 41/145 (28%), Positives = 65/145 (44%), Gaps = 1/145 (0%)
Frame = -1
Query: 1093 VATGGGDDKAFLWKIGNGDWAAELLGHKDSVSSLAFSYDGQLVASGGLDGVVQIFDASSG 914
+A+G D +W GH +S++ FS DG+ V SGGLD VV+++D ++G
Sbjct: 115 LASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAG 174
Query: 913 TLKCVLDGPGGGIEWVKWHPRGHVVLAGSEDCSMWMWNADKEAYLNMFSGHNQSVTCGDF 734
L G I + +HP ++ GS D ++ W+ + + V F
Sbjct: 175 KLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAF 234
Query: 733 TPDGKLICTGSDDA-SLIVWNPKSC 662
PDG+ + G DD + W P C
Sbjct: 235 HPDGQTLFCGLDDGLKVYSWEPVIC 259
>TAIR9_protein||AT5G52820.1 | Symbols: | WD-40 repeat family protein /
notchless protein, putative | chr5:21401423-21404203 FORWARD
Length = 474
Score = 64 bits (155), Expect = 2e-010
Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 3/135 (2%)
Frame = -1
Query: 868 VKWHPRGHVVLAGSEDCSMWMWNADKEAYLNMFSGHNQSVTCGDFTPDGKLICTGSDDAS 689
V + P G + +GS D ++ +W+ E L GH V ++PDGK + +GS
Sbjct: 115 VSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHLVSGSKSGE 174
Query: 688 LIVWNPKSCE-SIHVVKGHPYHTEGLICLDINSNSSLA--ISGSKDGSVHIVNIVTGKVV 518
+ WNPK E + GH G+ ++ +S ++ SKDG I +I K +
Sbjct: 175 ICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDARIWDITLKKSI 234
Query: 517 SSLTSHTESVECVKF 473
L+ HT +V CVK+
Sbjct: 235 ICLSGHTLAVTCVKW 249
>TAIR9_protein||AT1G15440.1 | Symbols: | transducin family protein / WD-40
repeat family protein | chr1:5306159-5309460 REVERSE
Length = 901
Score = 56 bits (134), Expect = 4e-008
Identities = 26/78 (33%), Positives = 41/78 (52%)
Frame = -3
Query: 371 HAEGVTCVTWIGTSKYLATGCADGTVSIWDSLLGNCVHTYHGHQDTVQAVSVSTNTDFIV 192
H V CVT+ S+ LATG D V +W+ + G C T+ H + V A+ + ++
Sbjct: 388 HYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLL 447
Query: 191 SVSVDNTARVYDTSEFQN 138
S S+D T R +D ++N
Sbjct: 448 SASLDGTVRAWDFKRYKN 465
>TAIR9_protein||AT1G15440.2 | Symbols: | transducin family protein / WD-40
repeat family protein | chr1:5306159-5309460 REVERSE
Length = 861
Score = 56 bits (134), Expect = 4e-008
Identities = 26/78 (33%), Positives = 41/78 (52%)
Frame = -3
Query: 371 HAEGVTCVTWIGTSKYLATGCADGTVSIWDSLLGNCVHTYHGHQDTVQAVSVSTNTDFIV 192
H V CVT+ S+ LATG D V +W+ + G C T+ H + V A+ + ++
Sbjct: 348 HYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLL 407
Query: 191 SVSVDNTARVYDTSEFQN 138
S S+D T R +D ++N
Sbjct: 408 SASLDGTVRAWDFKRYKN 425
>TAIR9_protein||AT5G67320.1 | Symbols: HOS15 | HOS15 (high expression of
osmotically responsive genes 15) | chr5:26857268-26860974 FORWARD
Length = 614
Score = 50 bits (119), Expect = 2e-006
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Frame = -1
Query: 1093 VATGGGDDKAFLWKIGNGDWAAELLGHKDSVSSLAFSYDGQLVASGGLDGVVQIFDASSG 914
+A+ D LW G GH++ V SLAFS +G+ +ASG LD + I+ G
Sbjct: 514 LASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEG 573
Query: 913 TLKCVLDGPGGGIEWVKWHPRGHVVLAGSEDCSM 812
+ G GG E V W+ G+ + A D S+
Sbjct: 574 KIVKTYTGNGGIFE-VCWNKEGNKIAACFADNSV 606
>TAIR9_protein||AT1G18080.1 | Symbols: ATARCA, RACK1A_AT | ATARCA; nucleotide
binding | chr1:6222325-6223901 FORWARD
Length = 328
Score = 49 bits (115), Expect = 7e-006
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Frame = -1
Query: 1108 LYPTLVATGGGDDKAFLWKIGNGDWAAELLGHKDSVSSLAFSYDGQLVASGGLDGVVQIF 929
L PT+V + D +W + N + L GH VS++A S DG L ASGG DGVV ++
Sbjct: 163 LQPTIV-SASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLW 221
Query: 928 DASSG 914
D + G
Sbjct: 222 DLAEG 226
>TAIR9_protein||AT1G62020.1 | Symbols: | coatomer protein complex, subunit
alpha, putative | chr1:22919814-22923728 FORWARD
Length = 1217
Score = 49 bits (114), Expect = 9e-006
Identities = 27/99 (27%), Positives = 49/99 (49%)
Frame = -1
Query: 1096 LVATGGGDDKAFLWKIGNGDWAAELLGHKDSVSSLAFSYDGQLVASGGLDGVVQIFDASS 917
L +GG D K +W N LLGH D + ++ F ++ + S D ++I++ S
Sbjct: 65 LFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQS 124
Query: 916 GTLKCVLDGPGGGIEWVKWHPRGHVVLAGSEDCSMWMWN 800
T VL G + +HP+ +V++ S D ++ +W+
Sbjct: 125 RTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
>TAIR9_protein||AT3G18130.1 | Symbols: RACK1C_AT | RACK1C_AT (RECEPTOR FOR
ACTIVATED C KINASE 1 C); nucleotide binding | chr3:6211109-6212371
REVERSE
Length = 327
Score = 49 bits (114), Expect = 9e-006
Identities = 32/108 (29%), Positives = 58/108 (53%), Gaps = 3/108 (2%)
Frame = -1
Query: 1108 LYPTLVATGGGDDKAFLWKIGNGDWAAELLGHKDSVSSLAFSYDGQLVASGGLDGVVQIF 929
L PT+V + D +W + N L+GH ++++A S DG L ASGG DGV+ ++
Sbjct: 162 LVPTIV-SASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLW 220
Query: 928 DASSGTLKCVLDGPGGGIEWVKWHPRGHVVLAGSEDCSMWMWNADKEA 785
D + G L+ G I + + P + + A +E+ S+ +W+ + ++
Sbjct: 221 DLAEGKKLYSLEA-GSIIHSLCFSPNRYWLCAATEN-SIRIWDLESKS 266
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,924,865,478
Number of Sequences: 33410
Number of Extensions: 5924865478
Number of Successful Extensions: 216150274
Number of sequences better than 0.0: 0
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