BLASTX 7.6.2
Query= UN10956 /QuerySize=966
(965 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G12130.1 | Symbols: | KH domain-containing pr... 420 9e-118
TAIR9_protein||AT5G06770.1 | Symbols: | KH domain-containing pr... 363 1e-100
TAIR9_protein||AT1G32360.1 | Symbols: | zinc finger (CCCH-type)... 55 5e-008
TAIR9_protein||AT1G61080.1 | Symbols: | proline-rich family pro... 50 2e-006
>TAIR9_protein||AT3G12130.1 | Symbols: | KH domain-containing protein / zinc
finger (CCCH type) family protein | chr3:3864486-3866406 REVERSE
Length = 249
Score = 420 bits (1078), Expect = 9e-118
Identities = 214/257 (83%), Positives = 231/257 (89%), Gaps = 12/257 (4%)
Frame = +1
Query: 85 RKRGRPEAAGSFNSNGGGGGFKKSKQEMESYSTGLGSKSKPCTKFFSTSGRPFGDNCHFL 264
RKRGRPE AGSFNSN GGG+KKSKQEMESYSTGLGSKSKPCTKFFSTSG PFG+NCHFL
Sbjct: 4 RKRGRPE-AGSFNSN--GGGYKKSKQEMESYSTGLGSKSKPCTKFFSTSGCPFGENCHFL 60
Query: 265 HYVPGGYNAVAQLTNMA-PMPQASRNMQGSGGGGGGGRFSGRGGGESGPGHVSSFGASAT 441
HYVPGGYNAV+Q+TNM P+PQ SRNMQGS G GGRFSGR GESGPGHVS+FG SAT
Sbjct: 61 HYVPGGYNAVSQMTNMGPPIPQVSRNMQGS---GNGGRFSGR--GESGPGHVSNFGDSAT 115
Query: 442 AKISVDASLAGAIIGKGGVSSKQICRQTGAKLSIQDHERDPNLKNIELEGTFEQINEASA 621
A+ SVDASLAGAIIGKGGVSSKQICRQTG KLSIQDHERDPNLKNI LEGT EQI+EASA
Sbjct: 116 ARFSVDASLAGAIIGKGGVSSKQICRQTGVKLSIQDHERDPNLKNIVLEGTLEQISEASA 175
Query: 622 MVRELIGRLNSAAGRRPPGAGGGLGGGWGLVQKGKPHPGSNFKTKMCERFAKGNCTFGDR 801
MV++LIGRLNSAA ++PP GGGLGGG G+ +GKPHPGSNFKTK+CERF+KGNCTFGDR
Sbjct: 176 MVKDLIGRLNSAA-KKPP--GGGLGGGGGMGSEGKPHPGSNFKTKICERFSKGNCTFGDR 232
Query: 802 CHFAHGEAELRRSGIA* 852
CHFAHGEAELR+SGI *
Sbjct: 233 CHFAHGEAELRKSGIV* 249
>TAIR9_protein||AT5G06770.1 | Symbols: | KH domain-containing protein / zinc
finger (CCCH type) family protein | chr5:2090937-2092787 REVERSE
Length = 241
Score = 363 bits (930), Expect = 1e-100
Identities = 190/249 (76%), Positives = 207/249 (83%), Gaps = 20/249 (8%)
Frame = +1
Query: 76 MDARKRGRPEAAGSFNSNGGGGGFKKSKQEMESYSTGLGSKSKPCTKFFSTSGRPFGDNC 255
MDARKRGRPEAA S NSN GGFK+SKQEMES STGLGSKSKPCTKFFSTSG PFGDNC
Sbjct: 1 MDARKRGRPEAAASHNSN---GGFKRSKQEMESISTGLGSKSKPCTKFFSTSGCPFGDNC 57
Query: 256 HFLHYVPGGYNAVAQLTNM-APMPQASRNMQGSGGGGGGGRFSGRGGGESGPGHVSSFGA 432
HFLHYVPGGYNA AQ+TN+ P+ Q SRNMQGS GG GGRFSGRG SGP VS FGA
Sbjct: 58 HFLHYVPGGYNAAAQMTNLRPPVSQVSRNMQGS--GGPGGRFSGRGDPGSGP--VSIFGA 113
Query: 433 SATAKISVDASLAGAIIGKGGVSSKQICRQTGAKLSIQDHERDPNLKNIELEGTFEQINE 612
S T+KISVDASLAGAIIGKGG+ SKQICR+TGAKLSI+DHERDPNLK IELEGTFEQIN
Sbjct: 114 S-TSKISVDASLAGAIIGKGGIHSKQICRETGAKLSIKDHERDPNLKIIELEGTFEQINV 172
Query: 613 ASAMVRELIGRLNSAAGRRPPGAGGGLGGGWGLVQKGKPHPGSNFKTKMCERFAKGNCTF 792
AS MVRELIGRL S ++P G GG +GKPHPGSN+KTK+C+R++KGNCT+
Sbjct: 173 ASGMVRELIGRLGSV--KKPQGIGG---------PEGKPHPGSNYKTKICDRYSKGNCTY 221
Query: 793 GDRCHFAHG 819
GDRCHFAHG
Sbjct: 222 GDRCHFAHG 230
Score = 92 bits (228), Expect = 3e-019
Identities = 39/55 (70%), Positives = 48/55 (87%), Gaps = 5/55 (9%)
Frame = +1
Query: 688 GLGGGWGLVQKGKPHPGSNFKTKMCERFAKGNCTFGDRCHFAHGEAELRRSGIA* 852
G+GG +GKPHPGSN+KTK+C+R++KGNCT+GDRCHFAHGE+ELRRSGIA*
Sbjct: 192 GIGG-----PEGKPHPGSNYKTKICDRYSKGNCTYGDRCHFAHGESELRRSGIA* 241
>TAIR9_protein||AT1G32360.1 | Symbols: | zinc finger (CCCH-type) family protein
| chr1:11673325-11675162 FORWARD
Length = 385
Score = 55 bits (132), Expect = 5e-008
Identities = 30/57 (52%), Positives = 37/57 (64%), Gaps = 5/57 (8%)
Frame = +1
Query: 676 GAGGGLGGGWGLVQKGKPHPGSNFKTKMCERF-AKGNCTFGDRCHFAHGEAELRRSG 843
G GGG G G G +Q KP SN+KT++C ++ G C FG +CHFAHG AEL R G
Sbjct: 242 GGGGGSGSGSG-IQILKP---SNWKTRICNKWEITGYCPFGAKCHFAHGAAELHRFG 294
>TAIR9_protein||AT1G61080.1 | Symbols: | proline-rich family protein |
chr1:22493194-22497019 REVERSE
Length = 908
Score = 50 bits (117), Expect = 2e-006
Identities = 39/123 (31%), Positives = 47/123 (38%), Gaps = 11/123 (8%)
Frame = -1
Query: 707 PHPPPSPPPAPGGLLPAAELSLPISSLTIALASFICSNVPSSSMFLRLGSLSWS*IDSFA 528
P PPP PPP P + A L LP T +A S P +
Sbjct: 416 PPPPPPPPPPPLSFIKTASLPLPSPPPTPPIADIAISMPPPPP--------PPPPPPAVM 467
Query: 527 PV*RHICFELTPPLP--MMAPASEASTLIFAVADAPKLDTCPGPDSPPPLPENLPPPPPP 354
P+ +H PPLP +M A A P + P P PPPLP + PPPP
Sbjct: 468 PL-KHFAPPPPPPLPPAVMPLKHFAPPPPTPPAFKPLKGSAPPPPPPPPLPTTIAAPPPP 526
Query: 353 PDP 345
P P
Sbjct: 527 PPP 529
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,015,077,310
Number of Sequences: 33410
Number of Extensions: 6015077310
Number of Successful Extensions: 221484317
Number of sequences better than 0.0: 0
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