BLASTX 7.6.2
Query= UN11023 /QuerySize=671
(670 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G01150.1 | Symbols: PTB, ATPTB1, PTB1 | PTB1 (... 359 9e-100
TAIR9_protein||AT5G53180.1 | Symbols: ATPTB2, PTB2 | PTB2 (POLYP... 299 2e-081
TAIR9_protein||AT3G01150.2 | Symbols: PTB | PTB1 (POLYPYRIMIDINE... 231 5e-061
TAIR9_protein||AT1G43190.1 | Symbols: | polypyrimidine tract-bi... 113 1e-025
TAIR9_protein||AT1G43190.2 | Symbols: | polypyrimidine tract-bi... 113 1e-025
TAIR9_protein||AT1G43190.3 | Symbols: | polypyrimidine tract-bi... 107 1e-023
TAIR9_protein||AT5G53180.2 | Symbols: ATPTB2, PTB2 | PTB2 (POLYP... 105 4e-023
>TAIR9_protein||AT3G01150.1 | Symbols: PTB, ATPTB1, PTB1 | PTB1 (POLYPYRIMIDINE
TRACT-BINDING PROTEIN 1); RNA binding / nucleic acid binding /
nucleotide binding | chr3:51732-54344 FORWARD
Length = 400
Score = 359 bits (921), Expect = 9e-100
Identities = 177/195 (90%), Positives = 189/195 (96%)
Frame = +2
Query: 86 SSSSQFRYTQTPSKVVHLRNLPWECVEEELIDLCKRFGKIVNTKTNVGANRNQAFVEFAE 265
S +QFRYTQTPSKVVHLRNLPWECVEEELIDLCKRFGKIVNTK+NVGANRNQAFVEFA+
Sbjct: 4 SGQTQFRYTQTPSKVVHLRNLPWECVEEELIDLCKRFGKIVNTKSNVGANRNQAFVEFAD 63
Query: 266 VNQAISMVSYYASSSEPAQIRGKTVYIQYSNRNEIVNNQSPGEVPGNVLLVTFEGVESHD 445
+NQAISMVSYYASSSEPAQIRGKTVYIQYSNR+EIVNNQSPG+VPGNVLLVTFEGVESH+
Sbjct: 64 LNQAISMVSYYASSSEPAQIRGKTVYIQYSNRHEIVNNQSPGDVPGNVLLVTFEGVESHE 123
Query: 446 VSIDVIHLVFSAYGFVHKIATFEKAAGFQALVQFTDVDTALAARTALDDRSIPKYLLPEH 625
VSIDVIHLVFSA+GFVHKIATFEKAAGFQALVQFTDV+TA AAR+ALD RSIP+YLL H
Sbjct: 124 VSIDVIHLVFSAFGFVHKIATFEKAAGFQALVQFTDVETASAARSALDGRSIPRYLLSAH 183
Query: 626 VGSCNLRMSYSAHTD 670
VGSC+LRMSYSAHTD
Sbjct: 184 VGSCSLRMSYSAHTD 198
Score = 77 bits (187), Expect = 1e-014
Identities = 44/93 (47%), Positives = 57/93 (61%), Gaps = 7/93 (7%)
Frame = +2
Query: 392 EVPGNVLLVTFEGVESHDVSIDVIHLVFSAYGFVHKIATFEKAAGFQALVQFTDVDTALA 571
E NVLL E ++ + V++DV+H VFSAYG V KIA FEK QAL+Q++D+ TA
Sbjct: 239 ESQSNVLLGLIENMQ-YAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPTAAM 297
Query: 572 ARTALDDRSIPKYLLPEHVGSCNLRMSYSAHTD 670
A+ AL+ I G C LR+SYS HTD
Sbjct: 298 AKEALEGHCI------YDGGYCKLRLSYSRHTD 324
>TAIR9_protein||AT5G53180.1 | Symbols: ATPTB2, PTB2 | PTB2 (POLYPYRIMIDINE
TRACT-BINDING PROTEIN 2); RNA binding / nucleic acid binding /
nucleotide binding | chr5:21568393-21571537 REVERSE
Length = 430
Score = 299 bits (763), Expect = 2e-081
Identities = 144/196 (73%), Positives = 169/196 (86%)
Frame = +2
Query: 83 MSSSSQFRYTQTPSKVVHLRNLPWECVEEELIDLCKRFGKIVNTKTNVGANRNQAFVEFA 262
+SS QFRYTQ PSKV+HLRNLPWEC EEELI+L K FG +VNTK NVGANRNQAF+EF
Sbjct: 4 VSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGTVVNTKCNVGANRNQAFIEFE 63
Query: 263 EVNQAISMVSYYASSSEPAQIRGKTVYIQYSNRNEIVNNQSPGEVPGNVLLVTFEGVESH 442
++NQAI M+SYYASSSEPAQ+RGKTVY+QYSNR EIVNN++ +V GNVLLVT EG ++
Sbjct: 64 DLNQAIQMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVVGNVLLVTIEGDDAR 123
Query: 443 DVSIDVIHLVFSAYGFVHKIATFEKAAGFQALVQFTDVDTALAARTALDDRSIPKYLLPE 622
VSIDV+HLVFSA+GFVHKI TFEK AG+QALVQFTD +TA AA+ ALD RSIP+YLL E
Sbjct: 124 MVSIDVLHLVFSAFGFVHKITTFEKTAGYQALVQFTDAETATAAKLALDGRSIPRYLLAE 183
Query: 623 HVGSCNLRMSYSAHTD 670
VG C+L+++YSAHTD
Sbjct: 184 TVGQCSLKITYSAHTD 199
>TAIR9_protein||AT3G01150.2 | Symbols: PTB | PTB1 (POLYPYRIMIDINE TRACT-BINDING
PROTEIN 1); RNA binding / nucleic acid binding / nucleotide binding |
chr3:51732-54344 FORWARD
Length = 371
Score = 231 bits (587), Expect = 5e-061
Identities = 111/123 (90%), Positives = 119/123 (96%)
Frame = +2
Query: 86 SSSSQFRYTQTPSKVVHLRNLPWECVEEELIDLCKRFGKIVNTKTNVGANRNQAFVEFAE 265
S +QFRYTQTPSKVVHLRNLPWECVEEELIDLCKRFGKIVNTK+NVGANRNQAFVEFA+
Sbjct: 4 SGQTQFRYTQTPSKVVHLRNLPWECVEEELIDLCKRFGKIVNTKSNVGANRNQAFVEFAD 63
Query: 266 VNQAISMVSYYASSSEPAQIRGKTVYIQYSNRNEIVNNQSPGEVPGNVLLVTFEGVESHD 445
+NQAISMVSYYASSSEPAQIRGKTVYIQYSNR+EIVNNQSPG+VPGNVLLVTFEGVESH+
Sbjct: 64 LNQAISMVSYYASSSEPAQIRGKTVYIQYSNRHEIVNNQSPGDVPGNVLLVTFEGVESHE 123
Query: 446 VSI 454
+
Sbjct: 124 ALV 126
Score = 85 bits (209), Expect = 3e-017
Identities = 41/57 (71%), Positives = 47/57 (82%)
Frame = +2
Query: 500 IATFEKAAGFQALVQFTDVDTALAARTALDDRSIPKYLLPEHVGSCNLRMSYSAHTD 670
+ TFE +ALVQFTDV+TA AAR+ALD RSIP+YLL HVGSC+LRMSYSAHTD
Sbjct: 113 LVTFEGVESHEALVQFTDVETASAARSALDGRSIPRYLLSAHVGSCSLRMSYSAHTD 169
Score = 77 bits (187), Expect = 1e-014
Identities = 44/93 (47%), Positives = 57/93 (61%), Gaps = 7/93 (7%)
Frame = +2
Query: 392 EVPGNVLLVTFEGVESHDVSIDVIHLVFSAYGFVHKIATFEKAAGFQALVQFTDVDTALA 571
E NVLL E ++ + V++DV+H VFSAYG V KIA FEK QAL+Q++D+ TA
Sbjct: 210 ESQSNVLLGLIENMQ-YAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPTAAM 268
Query: 572 ARTALDDRSIPKYLLPEHVGSCNLRMSYSAHTD 670
A+ AL+ I G C LR+SYS HTD
Sbjct: 269 AKEALEGHCI------YDGGYCKLRLSYSRHTD 295
>TAIR9_protein||AT1G43190.1 | Symbols: | polypyrimidine tract-binding protein,
putative / heterogeneous nuclear ribonucleoprotein, putative |
chr1:16275432-16278185 REVERSE
Length = 433
Score = 113 bits (282), Expect = 1e-025
Identities = 66/164 (40%), Positives = 104/164 (63%), Gaps = 9/164 (5%)
Frame = +2
Query: 122 SKVVHLRNLPWECVEEELIDLCKRFGKIVNTKTNVGANRNQAFVEFAEVNQAISMVSYYA 301
SKVVH+RN+ E E +L+ L + FG I TK + +NQA ++ +V+ A+S + ++
Sbjct: 5 SKVVHVRNVGHEISENDLLQLFQPFGVI--TKLVMLRAKNQALLQMQDVSSAVSALQFF- 61
Query: 302 SSSEPAQIRGKTVYIQYSNRNEIV----NNQSPGEVPGNVLLVTFEGVESHDVSIDVIHL 469
++ +P IRG+ VY+Q+S+ E+ N + P +LLVT + + +++DV+H
Sbjct: 62 TNVQPT-IRGRNVYVQFSSHQELTTIEQNIHGREDEPNRILLVTIHHM-LYPITVDVLHQ 119
Query: 470 VFSAYGFVHKIATFEKAAGFQALVQFTDVDTALAARTALDDRSI 601
VFS YGFV K+ TF+K+AGFQAL+Q+ A +ARTAL R+I
Sbjct: 120 VFSPYGFVEKLVTFQKSAGFQALIQYQVQQCAASARTALQGRNI 163
Score = 49 bits (114), Expect = 3e-006
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = +2
Query: 86 SSSSQFRYTQTPSKVVHLRNLPWECVEEELIDLCKRFGKIVNTKTNVGANRNQAFVEFA- 262
+++ +RY +P+K++HL LP + EEE+++ + G +VNTK + QA V+F
Sbjct: 342 NAAKNYRYCCSPTKMIHLSTLPQDVTEEEVMNHVQEHGAVVNTKVFEMNGKKQALVQFEN 401
Query: 263 EVNQAISMVSYYASSSEPAQIR 328
E A ++V +A+S + IR
Sbjct: 402 EEEAAEALVCKHATSLGGSIIR 423
>TAIR9_protein||AT1G43190.2 | Symbols: | polypyrimidine tract-binding protein,
putative / heterogeneous nuclear ribonucleoprotein, putative |
chr1:16275432-16278185 REVERSE
Length = 433
Score = 113 bits (282), Expect = 1e-025
Identities = 66/164 (40%), Positives = 104/164 (63%), Gaps = 9/164 (5%)
Frame = +2
Query: 122 SKVVHLRNLPWECVEEELIDLCKRFGKIVNTKTNVGANRNQAFVEFAEVNQAISMVSYYA 301
SKVVH+RN+ E E +L+ L + FG I TK + +NQA ++ +V+ A+S + ++
Sbjct: 5 SKVVHVRNVGHEISENDLLQLFQPFGVI--TKLVMLRAKNQALLQMQDVSSAVSALQFF- 61
Query: 302 SSSEPAQIRGKTVYIQYSNRNEIV----NNQSPGEVPGNVLLVTFEGVESHDVSIDVIHL 469
++ +P IRG+ VY+Q+S+ E+ N + P +LLVT + + +++DV+H
Sbjct: 62 TNVQPT-IRGRNVYVQFSSHQELTTIEQNIHGREDEPNRILLVTIHHM-LYPITVDVLHQ 119
Query: 470 VFSAYGFVHKIATFEKAAGFQALVQFTDVDTALAARTALDDRSI 601
VFS YGFV K+ TF+K+AGFQAL+Q+ A +ARTAL R+I
Sbjct: 120 VFSPYGFVEKLVTFQKSAGFQALIQYQVQQCAASARTALQGRNI 163
Score = 49 bits (114), Expect = 3e-006
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = +2
Query: 86 SSSSQFRYTQTPSKVVHLRNLPWECVEEELIDLCKRFGKIVNTKTNVGANRNQAFVEFA- 262
+++ +RY +P+K++HL LP + EEE+++ + G +VNTK + QA V+F
Sbjct: 342 NAAKNYRYCCSPTKMIHLSTLPQDVTEEEVMNHVQEHGAVVNTKVFEMNGKKQALVQFEN 401
Query: 263 EVNQAISMVSYYASSSEPAQIR 328
E A ++V +A+S + IR
Sbjct: 402 EEEAAEALVCKHATSLGGSIIR 423
>TAIR9_protein||AT1G43190.3 | Symbols: | polypyrimidine tract-binding protein,
putative / heterogeneous nuclear ribonucleoprotein, putative |
chr1:16275432-16278185 REVERSE
Length = 431
Score = 107 bits (265), Expect = 1e-023
Identities = 63/164 (38%), Positives = 99/164 (60%), Gaps = 11/164 (6%)
Frame = +2
Query: 122 SKVVHLRNLPWECVEEELIDLCKRFGKIVNTKTNVGANRNQAFVEFAEVNQAISMVSYYA 301
SKVVH+RN+ E E +L+ L + FG I TK + +NQA ++ +V+ A+S + ++
Sbjct: 5 SKVVHVRNVGHEISENDLLQLFQPFGVI--TKLVMLRAKNQALLQMQDVSSAVSALQFFT 62
Query: 302 SSSEPAQIRGKTVYIQYSNRNEIV----NNQSPGEVPGNVLLVTFEGVESHDVSIDVIHL 469
+ Q + VY+Q+S+ E+ N + P +LLVT + + +++DV+H
Sbjct: 63 N----VQPTIRNVYVQFSSHQELTTIEQNIHGREDEPNRILLVTIHHM-LYPITVDVLHQ 117
Query: 470 VFSAYGFVHKIATFEKAAGFQALVQFTDVDTALAARTALDDRSI 601
VFS YGFV K+ TF+K+AGFQAL+Q+ A +ARTAL R+I
Sbjct: 118 VFSPYGFVEKLVTFQKSAGFQALIQYQVQQCAASARTALQGRNI 161
Score = 49 bits (114), Expect = 3e-006
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = +2
Query: 86 SSSSQFRYTQTPSKVVHLRNLPWECVEEELIDLCKRFGKIVNTKTNVGANRNQAFVEFA- 262
+++ +RY +P+K++HL LP + EEE+++ + G +VNTK + QA V+F
Sbjct: 340 NAAKNYRYCCSPTKMIHLSTLPQDVTEEEVMNHVQEHGAVVNTKVFEMNGKKQALVQFEN 399
Query: 263 EVNQAISMVSYYASSSEPAQIR 328
E A ++V +A+S + IR
Sbjct: 400 EEEAAEALVCKHATSLGGSIIR 421
>TAIR9_protein||AT5G53180.2 | Symbols: ATPTB2, PTB2 | PTB2 (POLYPYRIMIDINE
TRACT-BINDING PROTEIN 2); RNA binding / nucleotide binding |
chr5:21568393-21571081 REVERSE
Length = 330
Score = 105 bits (260), Expect = 4e-023
Identities = 49/67 (73%), Positives = 58/67 (86%)
Frame = +2
Query: 470 VFSAYGFVHKIATFEKAAGFQALVQFTDVDTALAARTALDDRSIPKYLLPEHVGSCNLRM 649
VFSA+GFVHKI TFEK AG+QALVQFTD +TA AA+ ALD RSIP+YLL E VG C+L++
Sbjct: 33 VFSAFGFVHKITTFEKTAGYQALVQFTDAETATAAKLALDGRSIPRYLLAETVGQCSLKI 92
Query: 650 SYSAHTD 670
+YSAHTD
Sbjct: 93 TYSAHTD 99
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,057,924,028
Number of Sequences: 33410
Number of Extensions: 6057924028
Number of Successful Extensions: 221563250
Number of sequences better than 0.0: 0
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