BLASTX 7.6.2
Query= UN11149 /QuerySize=876
(875 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P30352|SFRS2_CHICK Splicing factor, arginine/serine-rich 2 OS... 55 4e-007
sp|Q5R1W5|SFRS2_PANTR Splicing factor, arginine/serine-rich 2 OS... 55 6e-007
sp|Q06A98|SFRS2_PIG Splicing factor, arginine/serine-rich 2 OS=S... 55 6e-007
sp|Q5ZMJ9|SRRM1_CHICK Serine/arginine repetitive matrix protein ... 55 6e-007
sp|Q3MHR5|SFRS2_BOVIN Splicing factor, arginine/serine-rich 2 OS... 55 7e-007
sp|Q01130|SFRS2_HUMAN Splicing factor, arginine/serine-rich 2 OS... 55 7e-007
sp|Q62093|SFRS2_MOUSE Splicing factor, arginine/serine-rich 2 OS... 55 7e-007
sp|Q6PDU1|SFRS2_RAT Splicing factor, arginine/serine-rich 2 OS=R... 55 7e-007
sp|O22315|SFRS1_ARATH Pre-mRNA-splicing factor SF2 OS=Arabidopsi... 51 8e-006
>sp|P30352|SFRS2_CHICK Splicing factor, arginine/serine-rich 2 OS=Gallus gallus
GN=SFRS2 PE=2 SV=1
Length = 221
Score = 55 bits (132), Expect = 4e-007
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Frame = -1
Query: 557 RCGDRGHIERNCKNSPKKLKRDQSYSRSPVRSRSPPPRRSRRNRSRSRSPSYSRSRSPVR 378
R G G+ R+ ++ R +S SRS RSRS R R+R+RSRS S S+SRS R
Sbjct: 109 RYGSSGYGRRSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKSRSARR 168
Query: 377 TEKKRTPEPAARSRSPEPTVLNSHPLKDRDHSPSPNEKSPMPEKKGQENG 228
++ K + +RSRS + S P + S S +S P K +E G
Sbjct: 169 SKSKSSSVSRSRSRSRSRSRSRSPPPTSKRESNS-RSRSKSPPKSPEEEG 217
>sp|Q5R1W5|SFRS2_PANTR Splicing factor, arginine/serine-rich 2 OS=Pan
troglodytes GN=SFRS2 PE=2 SV=3
Length = 221
Score = 55 bits (131), Expect = 6e-007
Identities = 41/112 (36%), Positives = 57/112 (50%), Gaps = 9/112 (8%)
Frame = -1
Query: 557 RCGDRGHIERNCKNSPKKLKRDQSYSRSPVRSRSPPPRRSRRNRSRSRSPSYSRSRSPVR 378
R G G+ R+ ++ R +S SRS RSRS R R+R+RSRS S S+SRS R
Sbjct: 109 RYGGGGYGRRSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKSRSARR 168
Query: 377 TEKKRT------PEPAARSRSPEPTVLNSHPLKDRDHSPSPNEKSPMPEKKG 240
++ K + +RSRS P ++ K R S SP E PE++G
Sbjct: 169 SKSKSSSVSRSRSRSRSRSRSRSPPPVSKREPKSRSRSKSPPES---PEEEG 217
>sp|Q06A98|SFRS2_PIG Splicing factor, arginine/serine-rich 2 OS=Sus scrofa
GN=SFRS2 PE=2 SV=1
Length = 221
Score = 55 bits (131), Expect = 6e-007
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Frame = -1
Query: 557 RCGDRGHIERNCKNSPKKLKRDQSYSRSPVRSRSPPPRRSRRNRSRSRSPSYSRSRSPVR 378
R G G+ R+ ++ R +S SRS RSRS R R+R+RSRS S S+SRS R
Sbjct: 109 RYGGGGYGRRSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKSRSARR 168
Query: 377 TEKKRTPEPAARSRSPEPTVLNSHPLKDRDHSPSPNEKSPMPEKKGQENG 228
++ K + +RSRS + S P + S S +S P K +E G
Sbjct: 169 SKSKSSSVSRSRSRSRSRSRSRSPPPASKRESKS-RSRSKSPPKSPEEEG 217
>sp|Q5ZMJ9|SRRM1_CHICK Serine/arginine repetitive matrix protein 1 OS=Gallus
gallus GN=SRRM1 PE=2 SV=1
Length = 888
Score = 55 bits (131), Expect = 6e-007
Identities = 40/111 (36%), Positives = 57/111 (51%), Gaps = 11/111 (9%)
Frame = -1
Query: 548 DRGHIERNCKNSPKKLKRDQSYSRSPVRSRSPPPR------RSRRNRSRSRSPSY---SR 396
D +R+ ++ + KRD+S S +SRSP PR R R RS SRSP + SR
Sbjct: 148 DEDKEKRDKEDKDNREKRDRSRSPRRRKSRSPSPRRRSSPIRRERKRSHSRSPHHRTKSR 207
Query: 395 SRSPVRTEKKRTPEPAARSRSPEPTVLNSHPLKDRDHSPSPNEKSPMPEKK 243
S +P +K+ TPEP S P+ TV+ + D +P + P+PE K
Sbjct: 208 SATPAPEKKEATPEPEP-SVKPKETVV-QEATSNSDIPKAPKSEPPVPETK 256
>sp|Q3MHR5|SFRS2_BOVIN Splicing factor, arginine/serine-rich 2 OS=Bos taurus
GN=SFRS2 PE=2 SV=3
Length = 221
Score = 55 bits (130), Expect = 7e-007
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Frame = -1
Query: 557 RCGDRGHIERNCKNSPKKLKRDQSYSRSPVRSRSPPPRRSRRNRSRSRSPSYSRSRSPVR 378
R G G+ R+ ++ R +S SRS RSRS R R+R+RSRS S S+SRS R
Sbjct: 109 RYGGGGYGRRSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKSRSARR 168
Query: 377 TEKKRTPEPAARSRSPEPTVLNSHPLKDRDHSPSPNEKSPMPEKKGQENG 228
++ K + +RSRS + S P + S S +S P K +E G
Sbjct: 169 SKSKSSSVSRSRSRSRSRSRSRSPPPVSKRESKS-RSRSKSPPKSPEEEG 217
>sp|Q01130|SFRS2_HUMAN Splicing factor, arginine/serine-rich 2 OS=Homo sapiens
GN=SFRS2 PE=1 SV=4
Length = 221
Score = 55 bits (130), Expect = 7e-007
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Frame = -1
Query: 557 RCGDRGHIERNCKNSPKKLKRDQSYSRSPVRSRSPPPRRSRRNRSRSRSPSYSRSRSPVR 378
R G G+ R+ ++ R +S SRS RSRS R R+R+RSRS S S+SRS R
Sbjct: 109 RYGGGGYGRRSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKSRSARR 168
Query: 377 TEKKRTPEPAARSRSPEPTVLNSHPLKDRDHSPSPNEKSPMPEKKGQENG 228
++ K + +RSRS + S P + S S +S P K +E G
Sbjct: 169 SKSKSSSVSRSRSRSRSRSRSRSPPPVSKRESKS-RSRSKSPPKSPEEEG 217
>sp|Q62093|SFRS2_MOUSE Splicing factor, arginine/serine-rich 2 OS=Mus musculus
GN=Sfrs2 PE=1 SV=4
Length = 221
Score = 55 bits (130), Expect = 7e-007
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Frame = -1
Query: 557 RCGDRGHIERNCKNSPKKLKRDQSYSRSPVRSRSPPPRRSRRNRSRSRSPSYSRSRSPVR 378
R G G+ R+ ++ R +S SRS RSRS R R+R+RSRS S S+SRS R
Sbjct: 109 RYGGGGYGRRSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKSRSARR 168
Query: 377 TEKKRTPEPAARSRSPEPTVLNSHPLKDRDHSPSPNEKSPMPEKKGQENG 228
++ K + +RSRS + S P + S S +S P K +E G
Sbjct: 169 SKSKSSSVSRSRSRSRSRSRSRSPPPVSKRESKS-RSRSKSPPKSPEEEG 217
>sp|Q6PDU1|SFRS2_RAT Splicing factor, arginine/serine-rich 2 OS=Rattus
norvegicus GN=Sfrs2 PE=1 SV=3
Length = 221
Score = 55 bits (130), Expect = 7e-007
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Frame = -1
Query: 557 RCGDRGHIERNCKNSPKKLKRDQSYSRSPVRSRSPPPRRSRRNRSRSRSPSYSRSRSPVR 378
R G G+ R+ ++ R +S SRS RSRS R R+R+RSRS S S+SRS R
Sbjct: 109 RYGGGGYGRRSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKSRSARR 168
Query: 377 TEKKRTPEPAARSRSPEPTVLNSHPLKDRDHSPSPNEKSPMPEKKGQENG 228
++ K + +RSRS + S P + S S +S P K +E G
Sbjct: 169 SKSKSSSVSRSRSRSRSRSRSRSPPPVSKRESKS-RSRSKSPPKSPEEEG 217
>sp|O22315|SFRS1_ARATH Pre-mRNA-splicing factor SF2 OS=Arabidopsis thaliana
GN=SF2 PE=1 SV=1
Length = 303
Score = 51 bits (121), Expect = 8e-006
Identities = 37/110 (33%), Positives = 50/110 (45%), Gaps = 7/110 (6%)
Frame = -1
Query: 551 GDRGHIERNC----KNSPKKLKRDQ---SYSRSPVRSRSPPPRRSRRNRSRSRSPSYSRS 393
G G ++ C K + KKL + ++S VR R R+ R+ SR RS S SRS
Sbjct: 156 GTTGVVDYTCYEDMKYALKKLDDTEFRNAFSNGYVRVREYDSRKDSRSPSRGRSYSKSRS 215
Query: 392 RSPVRTEKKRTPEPAARSRSPEPTVLNSHPLKDRDHSPSPNEKSPMPEKK 243
RS R+ + +RSRSP+ P K SP P KS P +
Sbjct: 216 RSRGRSVSRSRSRSRSRSRSPKAKSSRRSPAKSTSRSPGPRSKSRSPSPR 265
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,894,514,945
Number of Sequences: 518415
Number of Extensions: 45894514945
Number of Successful Extensions: 338263929
Number of sequences better than 0.0: 0
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