BLASTX 7.6.2
Query= UN11226 /QuerySize=1457
(1456 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G10610.1 | Symbols: RBP37, ATRBP37, CID12 | CI... 196 4e-050
TAIR9_protein||AT4G10610.2 | Symbols: RBP37, ATRBP37 | CID12; RN... 196 4e-050
TAIR9_protein||AT1G32790.1 | Symbols: CID11 | RNA-binding protei... 181 9e-046
TAIR9_protein||AT1G32790.2 | Symbols: CID11 | RNA-binding protei... 181 9e-046
TAIR9_protein||AT3G49390.1 | Symbols: CID10 | CID10; RNA binding... 177 2e-044
TAIR9_protein||AT3G49390.2 | Symbols: CID10 | CID10; RNA binding... 177 2e-044
TAIR9_protein||AT1G53650.1 | Symbols: CID8 | CID8 (CTC-INTERACTI... 160 3e-039
TAIR9_protein||AT1G53650.2 | Symbols: CID8 | CID8 (CTC-INTERACTI... 159 4e-039
TAIR9_protein||AT3G14450.1 | Symbols: CID9 | CID9 (CTC-Interacti... 159 6e-039
TAIR9_protein||AT5G24440.1 | Symbols: CID13 | CID13 (CTC-Interac... 141 1e-033
>TAIR9_protein||AT4G10610.1 | Symbols: RBP37, ATRBP37, CID12 | CID12; RNA
binding | chr4:6557336-6559143 FORWARD
Length = 337
Score = 196 bits (497), Expect = 4e-050
Identities = 97/125 (77%), Positives = 108/125 (86%), Gaps = 6/125 (4%)
Frame = -2
Query: 1092 QRRRRFSTEAVRRTTRETEDDPRTSMAQREDVIRRTVYVSDIDQQVTEEQLAGLFIGFGQ 913
+R++ F + RR +PRTS+AQRE++IRRTVYVSDIDQQVTEEQLAGLFIGFGQ
Sbjct: 122 RRKKSFGQQGKRRM------NPRTSLAQREEIIRRTVYVSDIDQQVTEEQLAGLFIGFGQ 175
Query: 912 FVDCRICGDPNSVLKFAFIEFTDEVGSRAALNLSGTVLGFYPVKVMPSKTAIAPVNPTLL 733
VDCRICGDPNSVL+FAFIEFTDEVG+R ALNLSGT+LGFYPVKVMPSKTAIAPVNPT L
Sbjct: 176 VVDCRICGDPNSVLRFAFIEFTDEVGARTALNLSGTMLGFYPVKVMPSKTAIAPVNPTFL 235
Query: 732 PRVRD 718
PR D
Sbjct: 236 PRTED 240
Score = 184 bits (466), Expect = 1e-046
Identities = 94/116 (81%), Positives = 99/116 (85%), Gaps = 3/116 (2%)
Frame = -3
Query: 677 KVMCSRLKTSPV---FGS*TEDEREKCARTIYCTNIDKKVTQTDIKLFFEAVCGEVLRLS 507
KVM S+ +PV F TEDERE CARTIYCTNIDKK+TQTDIKLFFE+VCGEV RL
Sbjct: 219 KVMPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKLTQTDIKLFFESVCGEVYRLR 278
Query: 506 LLGDYHHPTRIGFVEFAMAESAITALNCSGVLLGSLPIRVSPSKTPVHSRAVPRQQ 339
LLGDYHHPTRIGFVEF MAESAI ALNCSGVLLGSLPIRVSPSKTPV SRA+PR Q
Sbjct: 279 LLGDYHHPTRIGFVEFVMAESAIAALNCSGVLLGSLPIRVSPSKTPVRSRAIPRHQ 334
>TAIR9_protein||AT4G10610.2 | Symbols: RBP37, ATRBP37 | CID12; RNA binding |
chr4:6557336-6559019 FORWARD
Length = 327
Score = 196 bits (497), Expect = 4e-050
Identities = 97/125 (77%), Positives = 108/125 (86%), Gaps = 6/125 (4%)
Frame = -2
Query: 1092 QRRRRFSTEAVRRTTRETEDDPRTSMAQREDVIRRTVYVSDIDQQVTEEQLAGLFIGFGQ 913
+R++ F + RR +PRTS+AQRE++IRRTVYVSDIDQQVTEEQLAGLFIGFGQ
Sbjct: 122 RRKKSFGQQGKRRM------NPRTSLAQREEIIRRTVYVSDIDQQVTEEQLAGLFIGFGQ 175
Query: 912 FVDCRICGDPNSVLKFAFIEFTDEVGSRAALNLSGTVLGFYPVKVMPSKTAIAPVNPTLL 733
VDCRICGDPNSVL+FAFIEFTDEVG+R ALNLSGT+LGFYPVKVMPSKTAIAPVNPT L
Sbjct: 176 VVDCRICGDPNSVLRFAFIEFTDEVGARTALNLSGTMLGFYPVKVMPSKTAIAPVNPTFL 235
Query: 732 PRVRD 718
PR D
Sbjct: 236 PRTED 240
Score = 156 bits (393), Expect = 4e-038
Identities = 80/99 (80%), Positives = 84/99 (84%), Gaps = 3/99 (3%)
Frame = -3
Query: 677 KVMCSRLKTSPV---FGS*TEDEREKCARTIYCTNIDKKVTQTDIKLFFEAVCGEVLRLS 507
KVM S+ +PV F TEDERE CARTIYCTNIDKK+TQTDIKLFFE+VCGEV RL
Sbjct: 219 KVMPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKLTQTDIKLFFESVCGEVYRLR 278
Query: 506 LLGDYHHPTRIGFVEFAMAESAITALNCSGVLLGSLPIR 390
LLGDYHHPTRIGFVEF MAESAI ALNCSGVLLGSLPIR
Sbjct: 279 LLGDYHHPTRIGFVEFVMAESAIAALNCSGVLLGSLPIR 317
>TAIR9_protein||AT1G32790.1 | Symbols: CID11 | RNA-binding protein, putative |
chr1:11875174-11877188 REVERSE
Length = 359
Score = 181 bits (459), Expect = 9e-046
Identities = 88/103 (85%), Positives = 94/103 (91%)
Frame = -2
Query: 1026 RTSMAQREDVIRRTVYVSDIDQQVTEEQLAGLFIGFGQFVDCRICGDPNSVLKFAFIEFT 847
RTSMAQREDVIRRTVYVSD+DQQVTEEQLAGLF+ GQ VDCRICGDPNSVL+FAFIEFT
Sbjct: 161 RTSMAQREDVIRRTVYVSDLDQQVTEEQLAGLFVSCGQVVDCRICGDPNSVLRFAFIEFT 220
Query: 846 DEVGSRAALNLSGTVLGFYPVKVMPSKTAIAPVNPTLLPRVRD 718
DE G+ ALNLSGT+LGFYPVKV+PSKTAIAPVNPT LPR D
Sbjct: 221 DEEGAMTALNLSGTMLGFYPVKVLPSKTAIAPVNPTFLPRTED 263
Score = 159 bits (401), Expect = 5e-039
Identities = 81/111 (72%), Positives = 90/111 (81%), Gaps = 3/111 (2%)
Frame = -3
Query: 677 KVMCSRLKTSPV---FGS*TEDEREKCARTIYCTNIDKKVTQTDIKLFFEAVCGEVLRLS 507
KV+ S+ +PV F TEDERE CARTIYCTNIDKKVTQ+D+K+FFE+ CGEV RL
Sbjct: 242 KVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQSDVKIFFESFCGEVYRLR 301
Query: 506 LLGDYHHPTRIGFVEFAMAESAITALNCSGVLLGSLPIRVSPSKTPVHSRA 354
LLGDY H TRI FVEF MAESAI ALNCSGV+LGSLPIRVSPSKTPV R+
Sbjct: 302 LLGDYQHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRS 352
>TAIR9_protein||AT1G32790.2 | Symbols: CID11 | RNA-binding protein, putative |
chr1:11875028-11877188 REVERSE
Length = 407
Score = 181 bits (459), Expect = 9e-046
Identities = 88/103 (85%), Positives = 94/103 (91%)
Frame = -2
Query: 1026 RTSMAQREDVIRRTVYVSDIDQQVTEEQLAGLFIGFGQFVDCRICGDPNSVLKFAFIEFT 847
RTSMAQREDVIRRTVYVSD+DQQVTEEQLAGLF+ GQ VDCRICGDPNSVL+FAFIEFT
Sbjct: 161 RTSMAQREDVIRRTVYVSDLDQQVTEEQLAGLFVSCGQVVDCRICGDPNSVLRFAFIEFT 220
Query: 846 DEVGSRAALNLSGTVLGFYPVKVMPSKTAIAPVNPTLLPRVRD 718
DE G+ ALNLSGT+LGFYPVKV+PSKTAIAPVNPT LPR D
Sbjct: 221 DEEGAMTALNLSGTMLGFYPVKVLPSKTAIAPVNPTFLPRTED 263
Score = 143 bits (358), Expect = 5e-034
Identities = 73/101 (72%), Positives = 81/101 (80%), Gaps = 3/101 (2%)
Frame = -3
Query: 677 KVMCSRLKTSPV---FGS*TEDEREKCARTIYCTNIDKKVTQTDIKLFFEAVCGEVLRLS 507
KV+ S+ +PV F TEDERE CARTIYCTNIDKKVTQ+D+K+FFE+ CGEV RL
Sbjct: 242 KVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQSDVKIFFESFCGEVYRLR 301
Query: 506 LLGDYHHPTRIGFVEFAMAESAITALNCSGVLLGSLPIRVS 384
LLGDY H TRI FVEF MAESAI ALNCSGV+LGSLPIR S
Sbjct: 302 LLGDYQHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRSS 342
>TAIR9_protein||AT3G49390.1 | Symbols: CID10 | CID10; RNA binding / protein
binding | chr3:18314901-18317658 REVERSE
Length = 354
Score = 177 bits (448), Expect = 2e-044
Identities = 89/124 (71%), Positives = 103/124 (83%), Gaps = 6/124 (4%)
Frame = -2
Query: 1089 RRRRFSTEAVRRTTRETEDDPRTSMAQREDVIRRTVYVSDIDQQVTEEQLAGLFIGFGQF 910
RRRR + RR + RTS+AQ++DVIRRTVYVSDIDQQVTEE LAG+FI GQ
Sbjct: 142 RRRRSFGQGKRRMNK------RTSLAQKDDVIRRTVYVSDIDQQVTEENLAGVFINCGQV 195
Query: 909 VDCRICGDPNSVLKFAFIEFTDEVGSRAALNLSGTVLGFYPVKVMPSKTAIAPVNPTLLP 730
VDCR+CGDPNSVL+FAFIEFT+E G+RAAL++SGTVLGFYP+KV+PSKTAIAPVNPT LP
Sbjct: 196 VDCRVCGDPNSVLRFAFIEFTNEEGARAALSMSGTVLGFYPLKVLPSKTAIAPVNPTFLP 255
Query: 729 RVRD 718
R D
Sbjct: 256 RSED 259
Score = 143 bits (359), Expect = 4e-034
Identities = 73/107 (68%), Positives = 86/107 (80%), Gaps = 4/107 (3%)
Frame = -3
Query: 677 KVMCSRLKTSPV---FGS*TEDEREKCARTIYCTNIDKKVTQTDIKLFFEAVCGEVLRLS 507
KV+ S+ +PV F +EDERE C RT+YCTNIDK++TQ D+K FFE +CGEV RL
Sbjct: 238 KVLPSKTAIAPVNPTFLPRSEDEREMCVRTVYCTNIDKRITQIDLKGFFEMLCGEVHRLR 297
Query: 506 LLGDYHHPTRIGFVEFAMAESAITALNCSGVLLGSLPIRVSPSKTPV 366
LGDYHH TRI FVEFAMAESAI AL+CSG++LG+LPIRVSPSKTPV
Sbjct: 298 -LGDYHHQTRIAFVEFAMAESAIAALHCSGIVLGALPIRVSPSKTPV 343
>TAIR9_protein||AT3G49390.2 | Symbols: CID10 | CID10; RNA binding / protein
binding | chr3:18314901-18317658 REVERSE
Length = 354
Score = 177 bits (448), Expect = 2e-044
Identities = 89/124 (71%), Positives = 103/124 (83%), Gaps = 6/124 (4%)
Frame = -2
Query: 1089 RRRRFSTEAVRRTTRETEDDPRTSMAQREDVIRRTVYVSDIDQQVTEEQLAGLFIGFGQF 910
RRRR + RR + RTS+AQ++DVIRRTVYVSDIDQQVTEE LAG+FI GQ
Sbjct: 142 RRRRSFGQGKRRMNK------RTSLAQKDDVIRRTVYVSDIDQQVTEENLAGVFINCGQV 195
Query: 909 VDCRICGDPNSVLKFAFIEFTDEVGSRAALNLSGTVLGFYPVKVMPSKTAIAPVNPTLLP 730
VDCR+CGDPNSVL+FAFIEFT+E G+RAAL++SGTVLGFYP+KV+PSKTAIAPVNPT LP
Sbjct: 196 VDCRVCGDPNSVLRFAFIEFTNEEGARAALSMSGTVLGFYPLKVLPSKTAIAPVNPTFLP 255
Query: 729 RVRD 718
R D
Sbjct: 256 RSED 259
Score = 143 bits (359), Expect = 4e-034
Identities = 73/107 (68%), Positives = 86/107 (80%), Gaps = 4/107 (3%)
Frame = -3
Query: 677 KVMCSRLKTSPV---FGS*TEDEREKCARTIYCTNIDKKVTQTDIKLFFEAVCGEVLRLS 507
KV+ S+ +PV F +EDERE C RT+YCTNIDK++TQ D+K FFE +CGEV RL
Sbjct: 238 KVLPSKTAIAPVNPTFLPRSEDEREMCVRTVYCTNIDKRITQIDLKGFFEMLCGEVHRLR 297
Query: 506 LLGDYHHPTRIGFVEFAMAESAITALNCSGVLLGSLPIRVSPSKTPV 366
LGDYHH TRI FVEFAMAESAI AL+CSG++LG+LPIRVSPSKTPV
Sbjct: 298 -LGDYHHQTRIAFVEFAMAESAIAALHCSGIVLGALPIRVSPSKTPV 343
>TAIR9_protein||AT1G53650.1 | Symbols: CID8 | CID8 (CTC-INTERACTING DOMAIN 8);
RNA binding / protein binding | chr1:20029262-20031243 REVERSE
Length = 315
Score = 160 bits (403), Expect = 3e-039
Identities = 82/124 (66%), Positives = 95/124 (76%), Gaps = 4/124 (3%)
Frame = -2
Query: 1089 RRRRFSTEAVRRTTRETEDDPRTSMAQREDVIRRTVYVSDIDQQVTEEQLAGLFIGFGQF 910
RRRR + RR R S AQRED IRRTVYVSDIDQ VTEE LAGLF GQ
Sbjct: 99 RRRRNNYNQGRRVRL----PGRASKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSSCGQV 154
Query: 909 VDCRICGDPNSVLKFAFIEFTDEVGSRAALNLSGTVLGFYPVKVMPSKTAIAPVNPTLLP 730
VDCRICGDPNSVL+FAF+EF+D+ G+R+AL+L GT++G+YPV+V+PSKTAI PVNPT LP
Sbjct: 155 VDCRICGDPNSVLRFAFVEFSDDQGARSALSLGGTMIGYYPVRVLPSKTAILPVNPTFLP 214
Query: 729 RVRD 718
R D
Sbjct: 215 RSED 218
Score = 143 bits (360), Expect = 3e-034
Identities = 68/101 (67%), Positives = 79/101 (78%)
Frame = -3
Query: 659 LKTSPVFGS*TEDEREKCARTIYCTNIDKKVTQTDIKLFFEAVCGEVLRLSLLGDYHHPT 480
L +P F +EDERE C+RTIYCTN+DK T+ D+ FF++ CGEV RL LLGD H T
Sbjct: 206 LPVNPTFLPRSEDEREMCSRTIYCTNVDKNATEDDVNTFFQSACGEVTRLRLLGDQVHST 265
Query: 479 RIGFVEFAMAESAITALNCSGVLLGSLPIRVSPSKTPVHSR 357
RI FVEFAMAESA+ ALNCSG++LGS PIRVSPSKTPV SR
Sbjct: 266 RIAFVEFAMAESAVAALNCSGIVLGSQPIRVSPSKTPVRSR 306
>TAIR9_protein||AT1G53650.2 | Symbols: CID8 | CID8 (CTC-INTERACTING DOMAIN 8);
RNA binding / protein binding | chr1:20029262-20031243 REVERSE
Length = 309
Score = 159 bits (402), Expect = 4e-039
Identities = 76/103 (73%), Positives = 88/103 (85%)
Frame = -2
Query: 1026 RTSMAQREDVIRRTVYVSDIDQQVTEEQLAGLFIGFGQFVDCRICGDPNSVLKFAFIEFT 847
R S AQRED IRRTVYVSDIDQ VTEE LAGLF GQ VDCRICGDPNSVL+FAF+EF+
Sbjct: 110 RASKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSSCGQVVDCRICGDPNSVLRFAFVEFS 169
Query: 846 DEVGSRAALNLSGTVLGFYPVKVMPSKTAIAPVNPTLLPRVRD 718
D+ G+R+AL+L GT++G+YPV+V+PSKTAI PVNPT LPR D
Sbjct: 170 DDQGARSALSLGGTMIGYYPVRVLPSKTAILPVNPTFLPRSED 212
Score = 143 bits (360), Expect = 3e-034
Identities = 68/101 (67%), Positives = 79/101 (78%)
Frame = -3
Query: 659 LKTSPVFGS*TEDEREKCARTIYCTNIDKKVTQTDIKLFFEAVCGEVLRLSLLGDYHHPT 480
L +P F +EDERE C+RTIYCTN+DK T+ D+ FF++ CGEV RL LLGD H T
Sbjct: 200 LPVNPTFLPRSEDEREMCSRTIYCTNVDKNATEDDVNTFFQSACGEVTRLRLLGDQVHST 259
Query: 479 RIGFVEFAMAESAITALNCSGVLLGSLPIRVSPSKTPVHSR 357
RI FVEFAMAESA+ ALNCSG++LGS PIRVSPSKTPV SR
Sbjct: 260 RIAFVEFAMAESAVAALNCSGIVLGSQPIRVSPSKTPVRSR 300
>TAIR9_protein||AT3G14450.1 | Symbols: CID9 | CID9 (CTC-Interacting Domain 9);
RNA binding / protein binding | chr3:4849788-4851601 FORWARD
Length = 328
Score = 159 bits (400), Expect = 6e-039
Identities = 82/124 (66%), Positives = 94/124 (75%), Gaps = 6/124 (4%)
Frame = -2
Query: 1089 RRRRFSTEAVRRTTRETEDDPRTSMAQREDVIRRTVYVSDIDQQVTEEQLAGLFIGFGQF 910
R+RR ++ RR T R S AQRED IRRTVYVSDIDQ VTEE LAGLF GQ
Sbjct: 114 RKRRNYSQGRRRLT------GRISKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSNCGQV 167
Query: 909 VDCRICGDPNSVLKFAFIEFTDEVGSRAALNLSGTVLGFYPVKVMPSKTAIAPVNPTLLP 730
VDCRICGDP+SVL+FAF+EF D+ G+ AL+L GT+LGFYPV+V+PSKTAI PVNPT LP
Sbjct: 168 VDCRICGDPHSVLRFAFVEFADDQGAHEALSLGGTMLGFYPVRVLPSKTAILPVNPTFLP 227
Query: 729 RVRD 718
R D
Sbjct: 228 RSED 231
Score = 142 bits (356), Expect = 8e-034
Identities = 68/101 (67%), Positives = 81/101 (80%)
Frame = -3
Query: 659 LKTSPVFGS*TEDEREKCARTIYCTNIDKKVTQTDIKLFFEAVCGEVLRLSLLGDYHHPT 480
L +P F +EDERE C RTIYCTNIDKKV+Q D++ FFE+ CGEV RL LLGD H T
Sbjct: 219 LPVNPTFLPRSEDEREMCTRTIYCTNIDKKVSQADVRNFFESACGEVTRLRLLGDQLHST 278
Query: 479 RIGFVEFAMAESAITALNCSGVLLGSLPIRVSPSKTPVHSR 357
RI FVEFA+A+SA++ALNCSG+++GS PIRVSPSKTPV R
Sbjct: 279 RIAFVEFALADSALSALNCSGMVVGSQPIRVSPSKTPVRPR 319
>TAIR9_protein||AT5G24440.1 | Symbols: CID13 | CID13 (CTC-Interacting Domain
13); RNA binding / nucleic acid binding / nucleotide binding |
chr5:8345402-8347776 REVERSE
Length = 321
Score = 141 bits (354), Expect = 1e-033
Identities = 66/103 (64%), Positives = 84/103 (81%)
Frame = -2
Query: 1026 RTSMAQREDVIRRTVYVSDIDQQVTEEQLAGLFIGFGQFVDCRICGDPNSVLKFAFIEFT 847
+T++ Q ED+I+RTVYVSDID QVTEEQLA LF+ GQ VDCR+CGD S+L+FAFIEFT
Sbjct: 125 KTNLVQNEDMIKRTVYVSDIDNQVTEEQLASLFLSCGQVVDCRMCGDYKSILRFAFIEFT 184
Query: 846 DEVGSRAALNLSGTVLGFYPVKVMPSKTAIAPVNPTLLPRVRD 718
D G+R+AL SGT+ G +P++V SKTAIAPVNP+ LP+ +D
Sbjct: 185 DAEGARSALRKSGTMFGSHPIRVFMSKTAIAPVNPSFLPQSKD 227
Score = 134 bits (336), Expect = 2e-031
Identities = 63/95 (66%), Positives = 79/95 (83%)
Frame = -3
Query: 650 SPVFGS*TEDEREKCARTIYCTNIDKKVTQTDIKLFFEAVCGEVLRLSLLGDYHHPTRIG 471
+P F ++DE EKC +T+YCTNIDK+VT+ +++ FF+ VCGEV L LLGD++H TRI
Sbjct: 218 NPSFLPQSKDELEKCGKTVYCTNIDKEVTKMELENFFKTVCGEVHHLRLLGDFYHQTRIA 277
Query: 470 FVEFAMAESAITALNCSGVLLGSLPIRVSPSKTPV 366
FVEF +AESAI+ALNCSGV+LG LPIRVSPSKTPV
Sbjct: 278 FVEFKLAESAISALNCSGVVLGELPIRVSPSKTPV 312
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,145,451,083
Number of Sequences: 33410
Number of Extensions: 6145451083
Number of Successful Extensions: 221624556
Number of sequences better than 0.0: 0
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