BLASTX 7.6.2
Query= UN11264 /QuerySize=1207
(1206 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G48210.1 | Symbols: | FUNCTIONS IN: molecular... 452 3e-127
>TAIR9_protein||AT3G48210.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 10 plant structures;
EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal
differentiation and expansion stage, D bilateral stage, E expanded
cotyledon stage; CONTAINS InterPro DOMAIN/s: Kinetochore-Ndc80 complex,
subunit Spc25 (InterPro:IPR013255); Has 142 Blast hits to 142 proteins
in 51 species: Archae - 0; Bacteria - 2; Metazoa - 61; Fungi - 34;
Plants - 34; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). |
chr3:17849435-17851396 FORWARD
Length = 316
Score = 452 bits (1161), Expect = 3e-127
Identities = 237/316 (75%), Positives = 269/316 (85%), Gaps = 6/316 (1%)
Frame = -1
Query: 1170 MEQIS----GDTTKNN--TMGIVCEKDIEEQRLQIDSFIASPFHRSMDSLLDRAKATAQS 1009
MEQIS GDTTK ++G++CEKDI EQRL+IDSFIASPF RSM+SL++RA+ATAQS
Sbjct: 1 MEQISNIAGGDTTKETMASLGLICEKDIHEQRLKIDSFIASPFRRSMNSLVERAQATAQS 60
Query: 1008 QVELANVKADLREAEYELVKVLSAKTRKEGMQMGLRDSISATQSRIQVLKRTLQLHKSKK 829
QVEL N+KADLREAE ELVKVL+ KTRKE QMG+RDSISATQSRI+VL+R LQL KSKK
Sbjct: 61 QVELMNLKADLREAEDELVKVLAVKTRKEARQMGIRDSISATQSRIEVLRRNLQLQKSKK 120
Query: 828 EERAKTISHRLQGLSVSKDNAGQVTENKSHIDEAISWYNQALGFHVEAGHGVKFTFTNID 649
++ + IS +LQ LS SKDNAG+VTE+K+ I EAISWYN ALGFHVEAGHGVKFTFTNID
Sbjct: 121 DDSVRIISQQLQALSKSKDNAGKVTEDKADIHEAISWYNHALGFHVEAGHGVKFTFTNID 180
Query: 648 AKRPTREFSFTVHYGNDIYTLLDCNPQLDDMDEMVQELNKTNDLFGFVRLMRDKFQKATL 469
AKRPTREFSFTVHYGNDIYTLLD + QLD ++EMVQELNKTNDLF FVRLMR++F K+TL
Sbjct: 181 AKRPTREFSFTVHYGNDIYTLLDSDLQLDYINEMVQELNKTNDLFRFVRLMREQFLKSTL 240
Query: 468 SELPAHSENLPQETSIISASAPAMSITTDTSMLTPENKVSKVQVNRRQKRSSNSPLQSPA 289
SELP HS L QETS ISASAPA+S +TDT+M TPENK SKVQVNRRQKR S SPL +P
Sbjct: 241 SELPTHSGQLQQETSAISASAPAISFSTDTNMSTPENKRSKVQVNRRQKRGSESPLLAPV 300
Query: 288 PTSSTRRSSRLKAKK* 241
TS+TRRSSR K KK*
Sbjct: 301 STSATRRSSRFKGKK* 316
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,145,451,083
Number of Sequences: 33410
Number of Extensions: 6145451083
Number of Successful Extensions: 221624556
Number of sequences better than 0.0: 0
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