BLASTX 7.6.2
Query= UN11348 /QuerySize=1101
(1100 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G20120.1 | Symbols: COV1 | COV1 (CONTINUOUS VA... 502 2e-142
TAIR9_protein||AT2G20130.1 | Symbols: LCV1 | LCV1 (LIKE COV 1) |... 470 7e-133
TAIR9_protein||AT2G18460.2 | Symbols: LCV3 | LCV3 (like cov 3) |... 351 6e-097
TAIR9_protein||AT2G18460.1 | Symbols: LCV3 | LCV3 (like cov 3) |... 332 3e-091
TAIR9_protein||AT1G43130.1 | Symbols: LCV2 | LCV2 (LIKE COV 2) |... 313 1e-085
>TAIR9_protein||AT2G20120.1 | Symbols: COV1 | COV1 (CONTINUOUS VASCULAR RING) |
chr2:8687568-8689321 REVERSE
Length = 269
Score = 502 bits (1292), Expect = 2e-142
Identities = 249/269 (92%), Positives = 259/269 (96%), Gaps = 2/269 (0%)
Frame = +3
Query: 111 MGDEKPTVVMANRERDLELLMPVADSRDKDEGSTSKPSSSS--SSSHHQASHETLSLFIR 284
MGDEKP +VMANRERD ELL+PVADS DKD+GS+SKPSSSS SSS HQ+SHETLSLFIR
Sbjct: 1 MGDEKPVIVMANRERDRELLIPVADSGDKDDGSSSKPSSSSSASSSSHQSSHETLSLFIR 60
Query: 285 GWASKKFMTGCVILLPIAITFYITWWFIHFVDGFFSPIYAQLGINIFGFGFLTSIAFIFL 464
GWASKKFMTGCVILLPIAITFYITWWFIHFVDGFFSPIYAQLGIN+FGFGFLTSIAFIFL
Sbjct: 61 GWASKKFMTGCVILLPIAITFYITWWFIHFVDGFFSPIYAQLGINVFGFGFLTSIAFIFL 120
Query: 465 VGVFMSSWLGASVLNLGEWFIKRMPFVRHIYNASKQISTAISPDQNTQAFKEVAIIRHPR 644
VGVFMSSWLGASVLNLGEWFIKRMPFVRHIYNASKQISTAISPDQNTQAFKEVAIIRHPR
Sbjct: 121 VGVFMSSWLGASVLNLGEWFIKRMPFVRHIYNASKQISTAISPDQNTQAFKEVAIIRHPR 180
Query: 645 VGEYAFGFITSTVVLQNYPTEEELCCVYVPTNHLYIGDILLVNSNDVIRPNLSVWEGIEI 824
VGEYAFGFITSTVVLQNYPTEEELCCVYVPTNHLYIGD+LLVNSNDVIRPNLSV EGIEI
Sbjct: 181 VGEYAFGFITSTVVLQNYPTEEELCCVYVPTNHLYIGDLLLVNSNDVIRPNLSVREGIEI 240
Query: 825 VVSGGMSMPQILFTLDRPAASIDRATSV* 911
VVSGGMSMPQIL T+D+P ASIDRATS+*
Sbjct: 241 VVSGGMSMPQILSTVDKPLASIDRATSL* 269
>TAIR9_protein||AT2G20130.1 | Symbols: LCV1 | LCV1 (LIKE COV 1) |
chr2:8690614-8692234 REVERSE
Length = 257
Score = 470 bits (1209), Expect = 7e-133
Identities = 235/252 (93%), Positives = 241/252 (95%), Gaps = 1/252 (0%)
Frame = +3
Query: 138 MANRERDLELLMPVADSRDKDEGSTSKPSSSSS-SSHHQASHETLSLFIRGWASKKFMTG 314
MANRERD ELL+PVAD DKD+GS+SKPSSSSS SS HQ+ HETLSLFIRGWASKKFMTG
Sbjct: 1 MANRERDRELLIPVADFGDKDDGSSSKPSSSSSASSSHQSGHETLSLFIRGWASKKFMTG 60
Query: 315 CVILLPIAITFYITWWFIHFVDGFFSPIYAQLGINIFGFGFLTSIAFIFLVGVFMSSWLG 494
CVILLPIA+TFY TWWFIHFVDGFFSPIYA LGINIFGFGFLTSIAFIFLVGVFMSSWLG
Sbjct: 61 CVILLPIAVTFYTTWWFIHFVDGFFSPIYALLGINIFGFGFLTSIAFIFLVGVFMSSWLG 120
Query: 495 ASVLNLGEWFIKRMPFVRHIYNASKQISTAISPDQNTQAFKEVAIIRHPRVGEYAFGFIT 674
ASVLNLGEWFIKRMPFVRHIYNASKQISTAISPDQNTQAFKEVAIIRHPRVGEYAFGFIT
Sbjct: 121 ASVLNLGEWFIKRMPFVRHIYNASKQISTAISPDQNTQAFKEVAIIRHPRVGEYAFGFIT 180
Query: 675 STVVLQNYPTEEELCCVYVPTNHLYIGDILLVNSNDVIRPNLSVWEGIEIVVSGGMSMPQ 854
STVVLQNYPTEEELCCVYVPTNHLYIGDILLVNSNDVIRPNLSV EGIEIVVSGGMSMPQ
Sbjct: 181 STVVLQNYPTEEELCCVYVPTNHLYIGDILLVNSNDVIRPNLSVREGIEIVVSGGMSMPQ 240
Query: 855 ILFTLDRPAASI 890
IL TLD+P ASI
Sbjct: 241 ILSTLDKPLASI 252
>TAIR9_protein||AT2G18460.2 | Symbols: LCV3 | LCV3 (like cov 3) |
chr2:8001320-8002810 FORWARD
Length = 252
Score = 351 bits (899), Expect = 6e-097
Identities = 173/247 (70%), Positives = 200/247 (80%), Gaps = 1/247 (0%)
Frame = +3
Query: 138 MANRERDLELLMPVADS-RDKDEGSTSKPSSSSSSSHHQASHETLSLFIRGWASKKFMTG 314
M RERDLE L+P+ S + S P S +S H A E + IR WASKKFMTG
Sbjct: 1 METRERDLERLIPMHKSGASPRDVVLSVPPSPLASPIHVAGKEAIYKVIRSWASKKFMTG 60
Query: 315 CVILLPIAITFYITWWFIHFVDGFFSPIYAQLGINIFGFGFLTSIAFIFLVGVFMSSWLG 494
CVILLPIA+TFY TWWFIHFVDGFFSPIY LGIN+FG GF+TSI FIF+VGVFMSSWLG
Sbjct: 61 CVILLPIAVTFYFTWWFIHFVDGFFSPIYTHLGINMFGLGFVTSITFIFMVGVFMSSWLG 120
Query: 495 ASVLNLGEWFIKRMPFVRHIYNASKQISTAISPDQNTQAFKEVAIIRHPRVGEYAFGFIT 674
ASVL++GEWFIK+MP V +IY+ASKQIS AISPDQ++ AFKEVAIIRHP +GEYAFGFIT
Sbjct: 121 ASVLSIGEWFIKKMPLVSYIYSASKQISGAISPDQSSGAFKEVAIIRHPHMGEYAFGFIT 180
Query: 675 STVVLQNYPTEEELCCVYVPTNHLYIGDILLVNSNDVIRPNLSVWEGIEIVVSGGMSMPQ 854
STV+L+ EELCCVYVPTNHLY+GDI L++S D+IRPNLSV EGIEIV+SGGMS+P
Sbjct: 181 STVILRGRAGGEELCCVYVPTNHLYLGDIFLISSKDIIRPNLSVREGIEIVISGGMSIPH 240
Query: 855 ILFTLDR 875
+L TLD+
Sbjct: 241 MLTTLDK 247
>TAIR9_protein||AT2G18460.1 | Symbols: LCV3 | LCV3 (like cov 3) |
chr2:8001638-8002854 FORWARD
Length = 214
Score = 332 bits (850), Expect = 3e-091
Identities = 156/198 (78%), Positives = 177/198 (89%)
Frame = +3
Query: 279 IRGWASKKFMTGCVILLPIAITFYITWWFIHFVDGFFSPIYAQLGINIFGFGFLTSIAFI 458
IR WASKKFMTGCVILLPIA+TFY TWWFIHFVDGFFSPIY LGIN+FG GF+TSI FI
Sbjct: 10 IRSWASKKFMTGCVILLPIAVTFYFTWWFIHFVDGFFSPIYTHLGINMFGLGFVTSITFI 69
Query: 459 FLVGVFMSSWLGASVLNLGEWFIKRMPFVRHIYNASKQISTAISPDQNTQAFKEVAIIRH 638
F+VGVFMSSWLGASVL++GEWFIK+MP V +IY+ASKQIS AISPDQ++ AFKEVAIIRH
Sbjct: 70 FMVGVFMSSWLGASVLSIGEWFIKKMPLVSYIYSASKQISGAISPDQSSGAFKEVAIIRH 129
Query: 639 PRVGEYAFGFITSTVVLQNYPTEEELCCVYVPTNHLYIGDILLVNSNDVIRPNLSVWEGI 818
P +GEYAFGFITSTV+L+ EELCCVYVPTNHLY+GDI L++S D+IRPNLSV EGI
Sbjct: 130 PHMGEYAFGFITSTVILRGRAGGEELCCVYVPTNHLYLGDIFLISSKDIIRPNLSVREGI 189
Query: 819 EIVVSGGMSMPQILFTLD 872
EIV+SGGMS+P +L TLD
Sbjct: 190 EIVISGGMSIPHMLTTLD 207
>TAIR9_protein||AT1G43130.1 | Symbols: LCV2 | LCV2 (LIKE COV 2) |
chr1:16228661-16231158 REVERSE
Length = 262
Score = 313 bits (801), Expect = 1e-085
Identities = 152/229 (66%), Positives = 185/229 (80%), Gaps = 5/229 (2%)
Frame = +3
Query: 189 RDKDEGSTSKPSSSSSSSHHQASHETLSLFIRGWASKKFMTGCVILLPIAITFYITWWFI 368
+D D+ S P+S +SS+ +A + L + W SKKFMTG V+L P+A+TF ITWWFI
Sbjct: 20 QDPDDAPKSPPNSPNSST-RKACYGVL----QSWVSKKFMTGFVVLFPVAVTFLITWWFI 74
Query: 369 HFVDGFFSPIYAQLGINIFGFGFLTSIAFIFLVGVFMSSWLGASVLNLGEWFIKRMPFVR 548
FVDGFFSPIY LG++IFG GF+TS+ F F VG+F SSWLG++V LGE FI+RMPFV+
Sbjct: 75 QFVDGFFSPIYENLGVDIFGLGFITSVLFTFFVGIFASSWLGSTVFWLGEQFIRRMPFVK 134
Query: 549 HIYNASKQISTAISPDQNTQAFKEVAIIRHPRVGEYAFGFITSTVVLQNYPTEEELCCVY 728
HIY+ASKQISTAISPDQNT AFKEVAIIRHPR+GEYAFGFITS+V LQ EEELC VY
Sbjct: 135 HIYSASKQISTAISPDQNTTAFKEVAIIRHPRIGEYAFGFITSSVTLQTDHGEEELCSVY 194
Query: 729 VPTNHLYIGDILLVNSNDVIRPNLSVWEGIEIVVSGGMSMPQILFTLDR 875
VPTNHLYIGD+ LV+S ++IRPNLS+ EGIEI+VS GM+MPQ++ +DR
Sbjct: 195 VPTNHLYIGDVFLVSSEEIIRPNLSIREGIEIIVSVGMTMPQVISHVDR 243
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,189,134,169
Number of Sequences: 33410
Number of Extensions: 6189134169
Number of Successful Extensions: 221633207
Number of sequences better than 0.0: 0
|
