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TAIR blast output of UN11360


BLASTX 7.6.2

Query= UN11360 /QuerySize=1037
        (1036 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT3G49000.1 | Symbols:  | RNA polymerase III subu...    305   4e-083

>TAIR9_protein||AT3G49000.1 | Symbols:  | RNA polymerase III subunit RPC82
        family protein | chr3:18162903-18165846 FORWARD

          Length = 524

 Score =  305 bits (780), Expect = 4e-083
 Identities = 154/201 (76%), Positives = 178/201 (88%), Gaps = 2/201 (0%)
 Frame = +2

Query: 341 TEFGIVYAVHIIGSHFGSVASKVCECLLRRGPLSSRDLSRLTESDNINHNKVKDILCLLI 520
           +EFGIVYA+HII   FGSV SKVCECLLR+GPLSSRD+SRL ESD INHNKVKDIL LLI
Sbjct:   4 SEFGIVYAIHIITVQFGSVVSKVCECLLRKGPLSSRDISRLAESD-INHNKVKDILYLLI 62

Query: 521 QHNCVQAFSIEPPDGSSESKATVQYIALFSSIHHRARFNKFSKVVNEELGSQCKGVLEGL 700
           QHNCVQAFSIEPPDG SESKA VQYI LF++I HR R+NKFS++VNEEL S+C  VL+GL
Sbjct:  63 QHNCVQAFSIEPPDG-SESKAIVQYIVLFNNILHRVRYNKFSRIVNEELDSKCGAVLDGL 121

Query: 701 LSNGRLTLQQLIDRDKEFKNSLGPEAIRDSLEKLVAARFVERVPSPEPVLGNKEDGPAKK 880
           LSNGRLTL Q I+RD++  N++G EAIRDSL+KLVAARFVER+PSPEPVLGNKE  PAK+
Sbjct: 122 LSNGRLTLGQFIERDRDSGNTIGSEAIRDSLQKLVAARFVERIPSPEPVLGNKEKEPAKR 181

Query: 881 RGAKASKIFKEPESLEERILE 943
           RGAKA+KI KEPE+LEE+++E
Sbjct: 182 RGAKAAKILKEPETLEEQVVE 202


 Score =  48 bits (113), Expect = 8e-006
 Identities = 21/28 (75%), Positives = 28/28 (100%)
 Frame = +1

Query:  943 AATPVEAIRFPIIFEQDSSSALADDDSS 1026
            AATPV+AIRFP+IFE+DS+S+LADD+S+
Sbjct:  203 AATPVDAIRFPLIFEEDSNSSLADDNSN 230

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,189,134,169
Number of Sequences: 33410
Number of Extensions: 6189134169
Number of Successful Extensions: 221633207
Number of sequences better than 0.0: 0