BLASTX 7.6.2
Query= UN11360 /QuerySize=1037
(1036 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G49000.1 | Symbols: | RNA polymerase III subu... 305 4e-083
>TAIR9_protein||AT3G49000.1 | Symbols: | RNA polymerase III subunit RPC82
family protein | chr3:18162903-18165846 FORWARD
Length = 524
Score = 305 bits (780), Expect = 4e-083
Identities = 154/201 (76%), Positives = 178/201 (88%), Gaps = 2/201 (0%)
Frame = +2
Query: 341 TEFGIVYAVHIIGSHFGSVASKVCECLLRRGPLSSRDLSRLTESDNINHNKVKDILCLLI 520
+EFGIVYA+HII FGSV SKVCECLLR+GPLSSRD+SRL ESD INHNKVKDIL LLI
Sbjct: 4 SEFGIVYAIHIITVQFGSVVSKVCECLLRKGPLSSRDISRLAESD-INHNKVKDILYLLI 62
Query: 521 QHNCVQAFSIEPPDGSSESKATVQYIALFSSIHHRARFNKFSKVVNEELGSQCKGVLEGL 700
QHNCVQAFSIEPPDG SESKA VQYI LF++I HR R+NKFS++VNEEL S+C VL+GL
Sbjct: 63 QHNCVQAFSIEPPDG-SESKAIVQYIVLFNNILHRVRYNKFSRIVNEELDSKCGAVLDGL 121
Query: 701 LSNGRLTLQQLIDRDKEFKNSLGPEAIRDSLEKLVAARFVERVPSPEPVLGNKEDGPAKK 880
LSNGRLTL Q I+RD++ N++G EAIRDSL+KLVAARFVER+PSPEPVLGNKE PAK+
Sbjct: 122 LSNGRLTLGQFIERDRDSGNTIGSEAIRDSLQKLVAARFVERIPSPEPVLGNKEKEPAKR 181
Query: 881 RGAKASKIFKEPESLEERILE 943
RGAKA+KI KEPE+LEE+++E
Sbjct: 182 RGAKAAKILKEPETLEEQVVE 202
Score = 48 bits (113), Expect = 8e-006
Identities = 21/28 (75%), Positives = 28/28 (100%)
Frame = +1
Query: 943 AATPVEAIRFPIIFEQDSSSALADDDSS 1026
AATPV+AIRFP+IFE+DS+S+LADD+S+
Sbjct: 203 AATPVDAIRFPLIFEEDSNSSLADDNSN 230
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,189,134,169
Number of Sequences: 33410
Number of Extensions: 6189134169
Number of Successful Extensions: 221633207
Number of sequences better than 0.0: 0
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