Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN11401


BLASTX 7.6.2

Query= UN11401 /QuerySize=1330
        (1329 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT5G12130.1 | Symbols: PDE149, ATTERC | PDE149 (P...    389   3e-108

>TAIR9_protein||AT5G12130.1 | Symbols: PDE149, ATTERC | PDE149 (PIGMENT
        DEFECTIVE 149) | chr5:3919613-3922154 FORWARD

          Length = 385

 Score =  389 bits (997), Expect = 3e-108
 Identities = 197/214 (92%), Positives = 208/214 (97%)
 Frame = +2

Query:  497 KCPLMYQNRVLSYGVAGAVIFRFTLILIGTATLQKFEAVNLLLAAVLLYSSFKLFSSEED 676
            K PLMYQN+VL+YG+AGA++FRFTLIL+GTATLQKFEAVNLLLAAVLLYSSFKLF+SEED
Sbjct:  172 KVPLMYQNKVLTYGIAGAIVFRFTLILLGTATLQKFEAVNLLLAAVLLYSSFKLFASEED 231

Query:  677 DTDLSDNFIVKTCQRFIPVTSSYDGNRFFTKHDGIWKATPLLLTVVVIELSDIAFAVDSL 856
            DTDLSDNFIVKTCQRFIPVTSSYDGNRFFTKHDGI KATPLLLTV VIELSDIAFAVDS+
Sbjct:  232 DTDLSDNFIVKTCQRFIPVTSSYDGNRFFTKHDGILKATPLLLTVAVIELSDIAFAVDSI 291

Query:  857 PAVFGVTRDPFIVLTSNLFAILGLRSLYTLISEGMDDLEYLQPSIAVVLGFIGCKMILDF 1036
            PAVFGVTRDPFIVLTSNLFAILGLRSLYTLISEGMD+LEYLQPSIAVVLGFIG KMILDF
Sbjct:  292 PAVFGVTRDPFIVLTSNLFAILGLRSLYTLISEGMDELEYLQPSIAVVLGFIGVKMILDF 351

Query: 1037 FGFHVSTEASLGIVALSLSTGVLLSLTNKSGDS* 1138
            FGFH+STEASLG+VALSLSTGVLLSLTNKS DS*
Sbjct:  352 FGFHISTEASLGVVALSLSTGVLLSLTNKSSDS* 385


 Score =  140 bits (351), Expect = 3e-033
 Identities = 76/115 (66%), Positives = 83/115 (72%), Gaps = 6/115 (5%)
 Frame = +1

Query: 178 LSPIACSRGTDQEDDLSSS------SSSSSEKESRDLLPHDKDLRDTTLQDESYKTSFKT 339
           L PIACSRG DQED+   S       +  +   SR     D        Q+E+YKTSFKT
Sbjct:  60 LPPIACSRGIDQEDEEKESRELLPHKNDENATTSRSSSSVDSGGLKDYQQEETYKTSFKT 119

Query: 340 VALCVSAAVAFGIGIGLKDGVGKASEFFAGYLLEQSLSVDNLFVFVLVFKYFKVP 504
           VALCV  AVAFGIGIGLK+GVGKASEFFAGY+LEQSLSVDNLFVFVLVFKYFKVP
Sbjct: 120 VALCVGTAVAFGIGIGLKEGVGKASEFFAGYILEQSLSVDNLFVFVLVFKYFKVP 174


 Score =  117 bits (291), Expect = 3e-026
 Identities = 72/146 (49%), Positives = 89/146 (60%), Gaps = 32/146 (21%)
 Frame = +1

Query:  28 SLASVIHHHGVLAPAKQDRIFVSVPVIPPNFRVRGWTESPFSLV------SAANRRLS-- 183
           SLASVI HHG+L PAK DRIF+++PV PP+FR RGWT+SPFSL+      SAANRRLS  
Sbjct:   2 SLASVI-HHGILPPAKSDRIFLTIPVFPPDFRARGWTKSPFSLLINPSLASAANRRLSHL 60

Query: 184 -PIACSRGTDQEDDLSSSSSSSSEKESRDLLPHDKDLRDTT-----------LQDESYKT 327
            PIACSRG DQED+         EKESR+LLPH  D   TT           L+D   + 
Sbjct:  61 PPIACSRGIDQEDE---------EKESRELLPHKNDENATTSRSSSSVDSGGLKDYQQEE 111

Query: 328 SFKTVALCVSAAVAFGIGIGLKDGVG 405
           ++KT    V+  V   +  G+  G+G
Sbjct: 112 TYKTSFKTVALCVGTAVAFGI--GIG 135

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,233,609,797
Number of Sequences: 33410
Number of Extensions: 6233609797
Number of Successful Extensions: 221643266
Number of sequences better than 0.0: 0