BLASTX 7.6.2
Query= UN11452 /QuerySize=907
(906 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G70190.1 | Symbols: | ribosomal protein L12 f... 299 2e-081
TAIR9_protein||AT4G36420.1 | Symbols: | ribosomal protein L12 f... 139 4e-033
TAIR9_protein||AT2G03130.1 | Symbols: | ribosomal protein L12 f... 114 1e-025
TAIR9_protein||AT4G37660.1 | Symbols: | ribosomal protein L12 f... 112 4e-025
TAIR9_protein||AT3G06040.1 | Symbols: | ribosomal protein L12 f... 103 2e-022
TAIR9_protein||AT3G06040.2 | Symbols: | ribosomal protein L12 f... 103 2e-022
TAIR9_protein||AT3G06040.3 | Symbols: | ribosomal protein L12 f... 103 2e-022
TAIR9_protein||AT3G27850.1 | Symbols: RPL12-C | RPL12-C (ribosom... 64 2e-010
TAIR9_protein||AT3G27830.1 | Symbols: RPL12-A, RPL12 | RPL12-A (... 64 2e-010
TAIR9_protein||AT3G27840.1 | Symbols: RPL12-B | RPL12-B (ribosom... 55 4e-008
>TAIR9_protein||AT1G70190.1 | Symbols: | ribosomal protein L12 family protein |
chr1:26430616-26431242 FORWARD
Length = 209
Score = 299 bits (765), Expect = 2e-081
Identities = 165/214 (77%), Positives = 180/214 (84%), Gaps = 12/214 (5%)
Frame = +1
Query: 49 LILRFRQHLSDKLSP-PLASLIACRRSFGQPARKQDEEEEEEVEIDQRKLPTDYDPATFD 225
L+LRFRQHLS S L S I RS+ QPA+ +DEEEE E DQRKLPTDYDPATFD
Sbjct: 3 LVLRFRQHLSQTSSRLSLLSRIGGYRSYTQPAKIEDEEEE---EFDQRKLPTDYDPATFD 59
Query: 226 PTEHRSPPTDRVFRLVDEISSLTLSEISELGAIIMKKRGITEIPTVAVMKPGAVGGGIAQ 405
PTEHRSPPTDRVFRLVDEISSLTL EISELG+IIMKK+G+TE+PTVAVMKPGA GGG+
Sbjct: 60 PTEHRSPPTDRVFRLVDEISSLTLLEISELGSIIMKKKGMTELPTVAVMKPGA-GGGVG- 117
Query: 406 GQTGGGGG----GGASEEAKVEKTVFEVKLEGFEASGKIKIIKEVRSFTDLGLKEAKELV 573
GGGGG G SEEAKVEKTVFE+KLE FEAS KIKIIKE+RSFTDLGLKEAK LV
Sbjct: 118 --VGGGGGMVSQSGVSEEAKVEKTVFEIKLESFEASAKIKIIKELRSFTDLGLKEAKALV 175
Query: 574 EKTPSVLKAGVSKEEGEKIVEKLKALGAKVVLE* 675
EKTP++LKAG+SKEEGEKI+EKLKALGAKVVLE*
Sbjct: 176 EKTPAILKAGLSKEEGEKILEKLKALGAKVVLE* 209
>TAIR9_protein||AT4G36420.1 | Symbols: | ribosomal protein L12 family protein |
chr4:17203718-17204257 REVERSE
Length = 180
Score = 139 bits (348), Expect = 4e-033
Identities = 76/155 (49%), Positives = 104/155 (67%), Gaps = 5/155 (3%)
Frame = +1
Query: 217 TFDPTEHRSPPT--DRVFRLVDEISSLTLSEISELGAIIMKKRGITEIPTVAVMKPGAVG 390
T + SP T + V ++V+E+S+LTL E +L I+ +K I+E+P +A M PG
Sbjct: 29 TIQSRSYSSPATQSENVSKIVNELSNLTLLETMDLTEILRQKLNISELPVMAAMMPGMSL 88
Query: 391 GGIAQGQTGGGGGGGASEEAKVEKTVFEVKLEGFEASGKIKIIKEVRSFTDLGLKEAKEL 570
G ++ GG G E+ K KT F+V L+ ++A KIK+IKEVR+ T LGLKEAK+L
Sbjct: 89 PGSGASKSAGGEG---KEKKKEAKTAFDVMLQAYDAVSKIKVIKEVRTITALGLKEAKDL 145
Query: 571 VEKTPSVLKAGVSKEEGEKIVEKLKALGAKVVLE* 675
VEK P++LK GVSKEE EKI+EKLKA+GAKV +E*
Sbjct: 146 VEKAPTLLKKGVSKEEAEKIIEKLKAVGAKVAME* 180
>TAIR9_protein||AT2G03130.1 | Symbols: | ribosomal protein L12 family protein |
chr2:940744-941076 FORWARD
Length = 111
Score = 114 bits (284), Expect = 1e-025
Identities = 59/85 (69%), Positives = 68/85 (80%)
Frame = +1
Query: 418 GGGGGGASEEAKVEKTVFEVKLEGFEASGKIKIIKEVRSFTDLGLKEAKELVEKTPSVLK 597
G GGGA+E AK EKTVFEVKLE FEA KIKIIKEVR +GLKEA +LV K P+VLK
Sbjct: 7 GQSGGGANEGAKAEKTVFEVKLESFEARAKIKIIKEVRRIIGVGLKEAMKLVVKAPTVLK 66
Query: 598 AGVSKEEGEKIVEKLKALGAKVVLE 672
G+SKEEGE++VEKL ALGA+ VL+
Sbjct: 67 TGLSKEEGEEVVEKLNALGAEAVLQ 91
>TAIR9_protein||AT4G37660.1 | Symbols: | ribosomal protein L12 family protein |
chr4:17695543-17696046 FORWARD
Length = 168
Score = 112 bits (279), Expect = 4e-025
Identities = 60/95 (63%), Positives = 71/95 (74%), Gaps = 1/95 (1%)
Frame = +1
Query: 394 GIAQGQTGGGGGGGASEEAK-VEKTVFEVKLEGFEASGKIKIIKEVRSFTDLGLKEAKEL 570
G A TG G AS E K EKT F+VKLE FEA+ KIK+IKE+R+FTDLGLKEAK L
Sbjct: 74 GSAVAVTGSVGDASASTETKTAEKTTFDVKLEKFEAASKIKVIKEIRAFTDLGLKEAKAL 133
Query: 571 VEKTPSVLKAGVSKEEGEKIVEKLKALGAKVVLE* 675
VEK P ++K G++KEE EKI+EKLKA+GA V LE*
Sbjct: 134 VEKAPVIVKNGLTKEEAEKIMEKLKAVGAIVALE* 168
>TAIR9_protein||AT3G06040.1 | Symbols: | ribosomal protein L12 family protein |
chr3:1824516-1825076 REVERSE
Length = 187
Score = 103 bits (256), Expect = 2e-022
Identities = 51/82 (62%), Positives = 63/82 (76%)
Frame = +1
Query: 430 GGASEEAKVEKTVFEVKLEGFEASGKIKIIKEVRSFTDLGLKEAKELVEKTPSVLKAGVS 609
G + E K EKT F+VKLE F AS KIK+IKEVR+FT LGLKEAKELVEK P++LK GV+
Sbjct: 106 GAGNVEEKKEKTAFDVKLEKFNASDKIKVIKEVRTFTSLGLKEAKELVEKVPAILKQGVT 165
Query: 610 KEEGEKIVEKLKALGAKVVLE* 675
KEE +I+ K+KA+G V+E*
Sbjct: 166 KEEANEIIAKIKAVGGIAVME* 187
>TAIR9_protein||AT3G06040.2 | Symbols: | ribosomal protein L12 family protein |
chr3:1824516-1825076 REVERSE
Length = 187
Score = 103 bits (256), Expect = 2e-022
Identities = 51/82 (62%), Positives = 63/82 (76%)
Frame = +1
Query: 430 GGASEEAKVEKTVFEVKLEGFEASGKIKIIKEVRSFTDLGLKEAKELVEKTPSVLKAGVS 609
G + E K EKT F+VKLE F AS KIK+IKEVR+FT LGLKEAKELVEK P++LK GV+
Sbjct: 106 GAGNVEEKKEKTAFDVKLEKFNASDKIKVIKEVRTFTSLGLKEAKELVEKVPAILKQGVT 165
Query: 610 KEEGEKIVEKLKALGAKVVLE* 675
KEE +I+ K+KA+G V+E*
Sbjct: 166 KEEANEIIAKIKAVGGIAVME* 187
>TAIR9_protein||AT3G06040.3 | Symbols: | ribosomal protein L12 family protein |
chr3:1824516-1825076 REVERSE
Length = 187
Score = 103 bits (256), Expect = 2e-022
Identities = 51/82 (62%), Positives = 63/82 (76%)
Frame = +1
Query: 430 GGASEEAKVEKTVFEVKLEGFEASGKIKIIKEVRSFTDLGLKEAKELVEKTPSVLKAGVS 609
G + E K EKT F+VKLE F AS KIK+IKEVR+FT LGLKEAKELVEK P++LK GV+
Sbjct: 106 GAGNVEEKKEKTAFDVKLEKFNASDKIKVIKEVRTFTSLGLKEAKELVEKVPAILKQGVT 165
Query: 610 KEEGEKIVEKLKALGAKVVLE* 675
KEE +I+ K+KA+G V+E*
Sbjct: 166 KEEANEIIAKIKAVGGIAVME* 187
>TAIR9_protein||AT3G27850.1 | Symbols: RPL12-C | RPL12-C (ribosomal protein
l12-c); structural constituent of ribosome | chr3:10324905-10325468
FORWARD
Length = 188
Score = 64 bits (153), Expect = 2e-010
Identities = 35/80 (43%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Frame = +1
Query: 424 GGGGASEEAKVEKTVFEVKLEGFEASGKIKIIKEVRSFTDLGLKEAKELVEKTPSVLKAG 603
GG A E E+T F+V + +S +I +IK VR+ T L LKEAKEL+E P K G
Sbjct: 108 GGAAAVVE---EQTEFDVVINEVPSSSRIAVIKAVRALTSLALKEAKELIEGLPKKFKEG 164
Query: 604 VSKEEGEKIVEKLKALGAKV 663
++K+E E+ + L+ GAKV
Sbjct: 165 ITKDEAEEAKKTLEEAGAKV 184
>TAIR9_protein||AT3G27830.1 | Symbols: RPL12-A, RPL12 | RPL12-A (RIBOSOMAL
PROTEIN L12-A); structural constituent of ribosome |
chr3:10318576-10319151 FORWARD
Length = 192
Score = 64 bits (153), Expect = 2e-010
Identities = 35/80 (43%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Frame = +1
Query: 424 GGGGASEEAKVEKTVFEVKLEGFEASGKIKIIKEVRSFTDLGLKEAKELVEKTPSVLKAG 603
GG A E E+T F+V + +S +I +IK VR+ T L LKEAKEL+E P K G
Sbjct: 112 GGAAAVVE---EQTEFDVVINEVPSSSRIAVIKAVRALTSLALKEAKELIEGLPKKFKEG 168
Query: 604 VSKEEGEKIVEKLKALGAKV 663
++K+E E+ + L+ GAKV
Sbjct: 169 ITKDEAEEAKKTLEEAGAKV 188
>TAIR9_protein||AT3G27840.1 | Symbols: RPL12-B | RPL12-B (ribosomal protein
l12-b); structural constituent of ribosome | chr3:10323354-10323935
FORWARD
Length = 194
Score = 55 bits (132), Expect = 4e-008
Identities = 31/80 (38%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Frame = +1
Query: 424 GGGGASEEAKVEKTVFEVKLEGFEASGKIKIIKEVRSFTDLGLKEAKELVEKTPSVLKAG 603
GG AS E +T F+V + +I +I +R+ T L L E+KEL+E P K G
Sbjct: 114 GGATASVE---RQTTFDVVINDVPRGNRIAVITAIRAMTSLSLSESKELIEGFPKKFKEG 170
Query: 604 VSKEEGEKIVEKLKALGAKV 663
V+K+E E+ +L+ GAKV
Sbjct: 171 VTKDEAEEDKTQLEEAGAKV 190
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,233,609,797
Number of Sequences: 33410
Number of Extensions: 6233609797
Number of Successful Extensions: 221643266
Number of sequences better than 0.0: 0
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