BLASTX 7.6.2
Query= UN11470 /QuerySize=1540
(1539 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G51300.1 | Symbols: | splicing factor-related... 637 5e-183
TAIR9_protein||AT5G51300.2 | Symbols: | splicing factor-related... 637 5e-183
TAIR9_protein||AT5G51300.3 | Symbols: | splicing factor-related... 637 5e-183
TAIR9_protein||AT4G13340.1 | Symbols: | leucine-rich repeat fam... 116 7e-026
TAIR9_protein||AT5G47320.1 | Symbols: RPS19 | RPS19 (RIBOSOMAL P... 65 1e-010
TAIR9_protein||AT3G26420.1 | Symbols: ATRZ-1A | ATRZ-1A; RNA bin... 63 5e-010
TAIR9_protein||AT5G61030.1 | Symbols: GR-RBP3 | GR-RBP3 (glycine... 62 9e-010
TAIR9_protein||AT1G18630.1 | Symbols: GR-RBP6 | GR-RBP6 (glycine... 61 2e-009
TAIR9_protein||AT1G60000.1 | Symbols: | 29 kDa ribonucleoprotei... 60 4e-009
TAIR9_protein||AT4G13850.1 | Symbols: ATGRP2, GR-RBP2, GRP2 | GR... 59 6e-009
TAIR9_protein||AT4G13850.2 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-... 59 6e-009
TAIR9_protein||AT4G13850.3 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-... 59 6e-009
TAIR9_protein||AT1G54215.1 | Symbols: | proline-rich family pro... 59 7e-009
TAIR9_protein||AT4G13850.4 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-... 58 2e-008
>TAIR9_protein||AT5G51300.1 | Symbols: | splicing factor-related |
chr5:20849881-20852295 REVERSE
Length = 805
Score = 637 bits (1643), Expect = 5e-183
Identities = 317/409 (77%), Positives = 339/409 (82%), Gaps = 28/409 (6%)
Frame = +2
Query: 2 GKKMDDEYQNFLAELGGTLPESSLKQSTNTLALGPGSSGGSNPPWASNGGSGASAHPGLG 181
GKKMDDEYQNFLAELGGT+PESSLKQS TLALGPGSS GSNPPWA+N G+GASAHPGLG
Sbjct: 409 GKKMDDEYQNFLAELGGTVPESSLKQSA-TLALGPGSS-GSNPPWANNAGNGASAHPGLG 466
Query: 182 SNPAK-PSKEYDEKNLYIGFLPTMLEDDGLINLFSPFGEIVMAKVIKDHISGLSRGYGFV 358
S P K PSKEYDE NLYIGFLP MLEDDGLINLFS FGEIVMAKVIKD ++GLS+GYGFV
Sbjct: 467 STPTKPPSKEYDETNLYIGFLPPMLEDDGLINLFSSFGEIVMAKVIKDRVTGLSKGYGFV 526
Query: 359 KYADVQMANSAIQAMNGYRLEGKTLAVRIAGK---PAPPPGPPAPPPPTQSYPPP----- 514
KYADVQMAN+A+QAMNGYR EG+TLAVRIAGK P PPGPPAP PPTQ YPP
Sbjct: 527 KYADVQMANTAVQAMNGYRFEGRTLAVRIAGKSPPPIAPPGPPAPQPPTQGYPPSNQPPG 586
Query: 515 --PSQPYGAGGQLPNPSYSPAPVPWGPPVPSYSQYA-PPPPPGSYHPVPGQHMSPYGMHY 685
PSQ Y GG YS APVPWGPPVPSYS YA PPPPPGSYHPV GQHM PYGM Y
Sbjct: 587 AYPSQQYATGG------YSTAPVPWGPPVPSYSPYALPPPPPGSYHPVHGQHMPPYGMQY 640
Query: 686 PPPPPPPHVTQAPPPGTT----TSESQQSFPPGVVQADSGTPPPSVPPNVYGGSLSGVPG 853
PPPPPHVTQAPPPGTT +SE QQSFPPG VQADSG S+PPNVYG S++ +PG
Sbjct: 641 --PPPPPHVTQAPPPGTTQNPSSSEPQQSFPPG-VQADSGAATSSIPPNVYGSSVTAMPG 697
Query: 854 QPPYMSYPSYYAAVPPPPPPPVPTSSADHSQSMGNMPWANNPPMPSSDHSQGVGNAPWAP 1033
QPPYMSYPSYY AV PPP PP P SS DHSQ+MGNMPWANNP + + DHSQG+ NAPWAP
Sbjct: 698 QPPYMSYPSYYNAV-PPPTPPAPASSTDHSQNMGNMPWANNPSVSTPDHSQGLVNAPWAP 756
Query: 1034 NPLLPPSVGYSQSMGNAPWAPKPPVQPPAENPSAVGDFEYEKFMAEMK* 1180
NP +PP+VGYSQSMGN PWAPKPPVQPPAENPS+VG+ EYEKFMAEMK*
Sbjct: 757 NPPMPPTVGYSQSMGNVPWAPKPPVQPPAENPSSVGESEYEKFMAEMK* 805
>TAIR9_protein||AT5G51300.2 | Symbols: | splicing factor-related |
chr5:20849881-20852295 REVERSE
Length = 805
Score = 637 bits (1643), Expect = 5e-183
Identities = 317/409 (77%), Positives = 339/409 (82%), Gaps = 28/409 (6%)
Frame = +2
Query: 2 GKKMDDEYQNFLAELGGTLPESSLKQSTNTLALGPGSSGGSNPPWASNGGSGASAHPGLG 181
GKKMDDEYQNFLAELGGT+PESSLKQS TLALGPGSS GSNPPWA+N G+GASAHPGLG
Sbjct: 409 GKKMDDEYQNFLAELGGTVPESSLKQSA-TLALGPGSS-GSNPPWANNAGNGASAHPGLG 466
Query: 182 SNPAK-PSKEYDEKNLYIGFLPTMLEDDGLINLFSPFGEIVMAKVIKDHISGLSRGYGFV 358
S P K PSKEYDE NLYIGFLP MLEDDGLINLFS FGEIVMAKVIKD ++GLS+GYGFV
Sbjct: 467 STPTKPPSKEYDETNLYIGFLPPMLEDDGLINLFSSFGEIVMAKVIKDRVTGLSKGYGFV 526
Query: 359 KYADVQMANSAIQAMNGYRLEGKTLAVRIAGK---PAPPPGPPAPPPPTQSYPPP----- 514
KYADVQMAN+A+QAMNGYR EG+TLAVRIAGK P PPGPPAP PPTQ YPP
Sbjct: 527 KYADVQMANTAVQAMNGYRFEGRTLAVRIAGKSPPPIAPPGPPAPQPPTQGYPPSNQPPG 586
Query: 515 --PSQPYGAGGQLPNPSYSPAPVPWGPPVPSYSQYA-PPPPPGSYHPVPGQHMSPYGMHY 685
PSQ Y GG YS APVPWGPPVPSYS YA PPPPPGSYHPV GQHM PYGM Y
Sbjct: 587 AYPSQQYATGG------YSTAPVPWGPPVPSYSPYALPPPPPGSYHPVHGQHMPPYGMQY 640
Query: 686 PPPPPPPHVTQAPPPGTT----TSESQQSFPPGVVQADSGTPPPSVPPNVYGGSLSGVPG 853
PPPPPHVTQAPPPGTT +SE QQSFPPG VQADSG S+PPNVYG S++ +PG
Sbjct: 641 --PPPPPHVTQAPPPGTTQNPSSSEPQQSFPPG-VQADSGAATSSIPPNVYGSSVTAMPG 697
Query: 854 QPPYMSYPSYYAAVPPPPPPPVPTSSADHSQSMGNMPWANNPPMPSSDHSQGVGNAPWAP 1033
QPPYMSYPSYY AV PPP PP P SS DHSQ+MGNMPWANNP + + DHSQG+ NAPWAP
Sbjct: 698 QPPYMSYPSYYNAV-PPPTPPAPASSTDHSQNMGNMPWANNPSVSTPDHSQGLVNAPWAP 756
Query: 1034 NPLLPPSVGYSQSMGNAPWAPKPPVQPPAENPSAVGDFEYEKFMAEMK* 1180
NP +PP+VGYSQSMGN PWAPKPPVQPPAENPS+VG+ EYEKFMAEMK*
Sbjct: 757 NPPMPPTVGYSQSMGNVPWAPKPPVQPPAENPSSVGESEYEKFMAEMK* 805
>TAIR9_protein||AT5G51300.3 | Symbols: | splicing factor-related |
chr5:20849881-20852295 REVERSE
Length = 805
Score = 637 bits (1643), Expect = 5e-183
Identities = 317/409 (77%), Positives = 339/409 (82%), Gaps = 28/409 (6%)
Frame = +2
Query: 2 GKKMDDEYQNFLAELGGTLPESSLKQSTNTLALGPGSSGGSNPPWASNGGSGASAHPGLG 181
GKKMDDEYQNFLAELGGT+PESSLKQS TLALGPGSS GSNPPWA+N G+GASAHPGLG
Sbjct: 409 GKKMDDEYQNFLAELGGTVPESSLKQSA-TLALGPGSS-GSNPPWANNAGNGASAHPGLG 466
Query: 182 SNPAK-PSKEYDEKNLYIGFLPTMLEDDGLINLFSPFGEIVMAKVIKDHISGLSRGYGFV 358
S P K PSKEYDE NLYIGFLP MLEDDGLINLFS FGEIVMAKVIKD ++GLS+GYGFV
Sbjct: 467 STPTKPPSKEYDETNLYIGFLPPMLEDDGLINLFSSFGEIVMAKVIKDRVTGLSKGYGFV 526
Query: 359 KYADVQMANSAIQAMNGYRLEGKTLAVRIAGK---PAPPPGPPAPPPPTQSYPPP----- 514
KYADVQMAN+A+QAMNGYR EG+TLAVRIAGK P PPGPPAP PPTQ YPP
Sbjct: 527 KYADVQMANTAVQAMNGYRFEGRTLAVRIAGKSPPPIAPPGPPAPQPPTQGYPPSNQPPG 586
Query: 515 --PSQPYGAGGQLPNPSYSPAPVPWGPPVPSYSQYA-PPPPPGSYHPVPGQHMSPYGMHY 685
PSQ Y GG YS APVPWGPPVPSYS YA PPPPPGSYHPV GQHM PYGM Y
Sbjct: 587 AYPSQQYATGG------YSTAPVPWGPPVPSYSPYALPPPPPGSYHPVHGQHMPPYGMQY 640
Query: 686 PPPPPPPHVTQAPPPGTT----TSESQQSFPPGVVQADSGTPPPSVPPNVYGGSLSGVPG 853
PPPPPHVTQAPPPGTT +SE QQSFPPG VQADSG S+PPNVYG S++ +PG
Sbjct: 641 --PPPPPHVTQAPPPGTTQNPSSSEPQQSFPPG-VQADSGAATSSIPPNVYGSSVTAMPG 697
Query: 854 QPPYMSYPSYYAAVPPPPPPPVPTSSADHSQSMGNMPWANNPPMPSSDHSQGVGNAPWAP 1033
QPPYMSYPSYY AV PPP PP P SS DHSQ+MGNMPWANNP + + DHSQG+ NAPWAP
Sbjct: 698 QPPYMSYPSYYNAV-PPPTPPAPASSTDHSQNMGNMPWANNPSVSTPDHSQGLVNAPWAP 756
Query: 1034 NPLLPPSVGYSQSMGNAPWAPKPPVQPPAENPSAVGDFEYEKFMAEMK* 1180
NP +PP+VGYSQSMGN PWAPKPPVQPPAENPS+VG+ EYEKFMAEMK*
Sbjct: 757 NPPMPPTVGYSQSMGNVPWAPKPPVQPPAENPSSVGESEYEKFMAEMK* 805
>TAIR9_protein||AT4G13340.1 | Symbols: | leucine-rich repeat family protein /
extensin family protein | chr4:7758610-7760892 FORWARD
Length = 761
Score = 116 bits (288), Expect = 7e-026
Identities = 87/257 (33%), Positives = 108/257 (42%), Gaps = 44/257 (17%)
Frame = +2
Query: 455 PAPPPGPPA---PPPPTQSYPPPPSQPYGAGGQL----PNPSYSPAPVPWGPPVPSYSQY 613
P PPP PP PPPP S PPPP P P P +SP P + PP P Y
Sbjct: 501 PPPPPPPPVYSPPPPPVYSSPPPPPSPAPTPVYCTRPPPPPPHSPPPPQFSPPPPEPYYY 560
Query: 614 APPPPPGSYHPVPGQHMSPYGMHYPPPPPPPHVTQAPPPGTTTSESQQSF-----PPGVV 778
+ PPPP H P H SP H PPPP P+++ PPP +S PP +
Sbjct: 561 SSPPPP---HSSPPPH-SPPPPHSPPPPIYPYLSPPPPPTPVSSPPPTPVYSPPPPPPCI 616
Query: 779 QADSGTP-----PPSVPPNVYGGSLSGVPGQPPYMSYPS----YYAAVPPPPP----PPV 919
+ P PP PP V+ S P P Y S P YY++ PPPPP P
Sbjct: 617 EPPPPPPCIEYSPPPPPPVVH---YSSPPPPPVYYSSPPPPPVYYSSPPPPPPVHYSSPP 673
Query: 920 PTSSADHSQSMGNMPWANNPPMPSSDHSQGVGNAPWAPNPLLPPSVGYSQSMGNAPWAPK 1099
P HS + +++ PP PS+ + AP + PP V +S P
Sbjct: 674 PPEVHYHSPPPSPVHYSSPPPPPSAPCEESPPPAPVVHHSPPPPMVHHS---------PP 724
Query: 1100 PPV---QPPAENPSAVG 1141
PPV PP +P G
Sbjct: 725 PPVIHQSPPPPSPEYEG 741
>TAIR9_protein||AT5G47320.1 | Symbols: RPS19 | RPS19 (RIBOSOMAL PROTEIN S19);
RNA binding | chr5:19203801-19204951 FORWARD
Length = 213
Score = 65 bits (157), Expect = 1e-010
Identities = 34/83 (40%), Positives = 47/83 (56%)
Frame = +2
Query: 200 SKEYDEKNLYIGFLPTMLEDDGLINLFSPFGEIVMAKVIKDHISGLSRGYGFVKYADVQM 379
S Y LYIG L ++ L + FS F + A+V+ + ++G SRGYGFV +
Sbjct: 25 SLRYMSTKLYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKVTGRSRGYGFVNFISEDS 84
Query: 380 ANSAIQAMNGYRLEGKTLAVRIA 448
ANSAI AMNG L G ++V +A
Sbjct: 85 ANSAISAMNGQELNGFNISVNVA 107
>TAIR9_protein||AT3G26420.1 | Symbols: ATRZ-1A | ATRZ-1A; RNA binding /
nucleotide binding | chr3:9671953-9673055 FORWARD
Length = 246
Score = 63 bits (151), Expect = 5e-010
Identities = 32/78 (41%), Positives = 46/78 (58%)
Frame = +2
Query: 206 EYDEKNLYIGFLPTMLEDDGLINLFSPFGEIVMAKVIKDHISGLSRGYGFVKYADVQMAN 385
E E +IG L D GL + F +G +V AKV+ D SG SRG+GF+ + + + +
Sbjct: 3 EDPEYRCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKAMD 62
Query: 386 SAIQAMNGYRLEGKTLAV 439
AI AMNG L+G+T+ V
Sbjct: 63 EAIAAMNGMDLDGRTITV 80
>TAIR9_protein||AT5G61030.1 | Symbols: GR-RBP3 | GR-RBP3 (glycine-rich
RNA-binding protein 3); ATP binding / RNA binding |
chr5:24560870-24562152 FORWARD
Length = 310
Score = 62 bits (149), Expect = 9e-010
Identities = 30/75 (40%), Positives = 48/75 (64%)
Frame = +2
Query: 224 LYIGFLPTMLEDDGLINLFSPFGEIVMAKVIKDHISGLSRGYGFVKYADVQMANSAIQAM 403
L+IG + +++D L F+ +GE+V +VI D +G SRG+GFV + + A+SAIQA+
Sbjct: 42 LFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSAIQAL 101
Query: 404 NGYRLEGKTLAVRIA 448
+G L G+ + V A
Sbjct: 102 DGRDLHGRVVKVNYA 116
>TAIR9_protein||AT1G18630.1 | Symbols: GR-RBP6 | GR-RBP6 (glycine-rich
RNA-binding protein 6); RNA binding / nucleic acid binding / nucleotide
binding | chr1:6415226-6416283 FORWARD
Length = 156
Score = 61 bits (147), Expect = 2e-009
Identities = 31/75 (41%), Positives = 47/75 (62%)
Frame = +2
Query: 224 LYIGFLPTMLEDDGLINLFSPFGEIVMAKVIKDHISGLSRGYGFVKYADVQMANSAIQAM 403
+++G L + + L F FG+IV A V+ D SGLSRG+GFV Y +++AN+A+QAM
Sbjct: 38 IFVGGLSPSTDVELLKEAFGSFGKIVDAVVVLDRESGLSRGFGFVTYDSIEVANNAMQAM 97
Query: 404 NGYRLEGKTLAVRIA 448
L+G+ + V A
Sbjct: 98 QNKELDGRIIGVHPA 112
>TAIR9_protein||AT1G60000.1 | Symbols: | 29 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp29, putative | chr1:22093678-22094540
REVERSE
Length = 259
Score = 60 bits (143), Expect = 4e-009
Identities = 31/89 (34%), Positives = 52/89 (58%), Gaps = 4/89 (4%)
Frame = +2
Query: 194 KPSKE----YDEKNLYIGFLPTMLEDDGLINLFSPFGEIVMAKVIKDHISGLSRGYGFVK 361
KP+KE E L++G L + + L F G++V A+V+ D +G SRGYGFV
Sbjct: 165 KPNKEPLYPETEHKLFVGNLSWTVTSESLAGAFRECGDVVGARVVFDGDTGRSRGYGFVC 224
Query: 362 YADVQMANSAIQAMNGYRLEGKTLAVRIA 448
Y+ +A+++++G+ LEG+ + V +A
Sbjct: 225 YSSKAEMETALESLDGFELEGRAIRVNLA 253
>TAIR9_protein||AT4G13850.1 | Symbols: ATGRP2, GR-RBP2, GRP2 | GR-RBP2
(GLYCINE-RICH RNA-BINDING PROTEIN 2); ATP binding / RNA binding /
double-stranded DNA binding / single-stranded DNA binding |
chr4:8021314-8022065 FORWARD
Length = 159
Score = 59 bits (142), Expect = 6e-009
Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Frame = +2
Query: 224 LYIGFLPTMLEDDGLINLFSPFGEIVMAKVIKDHISGLSRGYGFVKYADVQMANSAIQAM 403
L+IG L +D L + F+ FG++V AKVI D +G SRG+GFV + D A +AI M
Sbjct: 37 LFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEM 96
Query: 404 NGYRLEGKTLAVRIAG-KPAPP 466
+G L G+ + V A +P+ P
Sbjct: 97 DGKELNGRHIRVNPANDRPSAP 118
>TAIR9_protein||AT4G13850.2 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-RICH
RNA-BINDING PROTEIN 2); ATP binding / RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr4:8021314-8022065 FORWARD
Length = 154
Score = 59 bits (142), Expect = 6e-009
Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Frame = +2
Query: 224 LYIGFLPTMLEDDGLINLFSPFGEIVMAKVIKDHISGLSRGYGFVKYADVQMANSAIQAM 403
L+IG L +D L + F+ FG++V AKVI D +G SRG+GFV + D A +AI M
Sbjct: 37 LFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEM 96
Query: 404 NGYRLEGKTLAVRIAG-KPAPP 466
+G L G+ + V A +P+ P
Sbjct: 97 DGKELNGRHIRVNPANDRPSAP 118
>TAIR9_protein||AT4G13850.3 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-RICH
RNA-BINDING PROTEIN 2); ATP binding / RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr4:8021314-8022065 FORWARD
Length = 145
Score = 59 bits (142), Expect = 6e-009
Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Frame = +2
Query: 224 LYIGFLPTMLEDDGLINLFSPFGEIVMAKVIKDHISGLSRGYGFVKYADVQMANSAIQAM 403
L+IG L +D L + F+ FG++V AKVI D +G SRG+GFV + D A +AI M
Sbjct: 37 LFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEM 96
Query: 404 NGYRLEGKTLAVRIAG-KPAPP 466
+G L G+ + V A +P+ P
Sbjct: 97 DGKELNGRHIRVNPANDRPSAP 118
>TAIR9_protein||AT1G54215.1 | Symbols: | proline-rich family protein |
chr1:20243118-20243627 FORWARD
Length = 170
Score = 59 bits (141), Expect = 7e-009
Identities = 30/84 (35%), Positives = 32/84 (38%)
Frame = +2
Query: 455 PAPPPGPPAPPPPTQSYPPPPSQPYGAGGQLPNPSYSPAPVPWGPPVPSYSQYAPPPPPG 634
P PP PP PPPP PPPP P A P P P + S PP PP
Sbjct: 39 PQSPPPPPPPPPPPPPPPPPPPPPPPAVNMSVETGIPPPPPPVTDMIKPLSSPPPPQPPP 98
Query: 635 SYHPVPGQHMSPYGMHYPPPPPPP 706
P P +PPPP P
Sbjct: 99 RSQPPPKPPQKNLPRRHPPPPRSP 122
>TAIR9_protein||AT4G13850.4 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-RICH
RNA-BINDING PROTEIN 2); ATP binding / RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr4:8021314-8022065 FORWARD
Length = 130
Score = 58 bits (138), Expect = 2e-008
Identities = 32/75 (42%), Positives = 45/75 (60%)
Frame = +2
Query: 224 LYIGFLPTMLEDDGLINLFSPFGEIVMAKVIKDHISGLSRGYGFVKYADVQMANSAIQAM 403
L+IG L +D L + F+ FG++V AKVI D +G SRG+GFV + D A +AI M
Sbjct: 37 LFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEM 96
Query: 404 NGYRLEGKTLAVRIA 448
+G L G+ + V A
Sbjct: 97 DGKELNGRHIRVNPA 111
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,233,609,797
Number of Sequences: 33410
Number of Extensions: 6233609797
Number of Successful Extensions: 221643266
Number of sequences better than 0.0: 0
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