BLASTX 7.6.2
Query= UN11473 /QuerySize=779
(778 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G11080.1 | Symbols: | high mobility group (HM... 389 1e-108
TAIR9_protein||AT4G23800.1 | Symbols: | high mobility group (HM... 380 8e-106
TAIR9_protein||AT3G28730.1 | Symbols: ATHMG, SSRP1, NFD | ATHMG ... 68 6e-012
TAIR9_protein||AT5G23420.1 | Symbols: HMGB6 | HMGB6; transcripti... 55 6e-008
TAIR9_protein||AT1G62760.1 | Symbols: | invertase/pectin methyl... 51 8e-007
TAIR9_protein||AT1G76720.1 | Symbols: | GTP binding / GTPase/ t... 49 2e-006
TAIR9_protein||AT1G76810.1 | Symbols: | eukaryotic translation ... 49 2e-006
>TAIR9_protein||AT4G11080.1 | Symbols: | high mobility group (HMG1/2) family
protein | chr4:6760898-6763272 REVERSE
Length = 447
Score = 389 bits (999), Expect = 1e-108
Identities = 208/249 (83%), Positives = 222/249 (89%), Gaps = 17/249 (6%)
Frame = +2
Query: 41 MATV-AEAAPAKKSRNSRKALKQKNEIAESPLLLSSPA--KGKETKKSYEKDLMEMQAML 211
M+TV ++ A AKKSRNSRKALKQKNEI E SSP KGKET KS+EKDLMEMQAML
Sbjct: 1 MSTVSSDPAHAKKSRNSRKALKQKNEIVE-----SSPVSDKGKET-KSFEKDLMEMQAML 54
Query: 212 EKMKIEKEKTEDLLKEKDEILRKKEEELETRDVEQEKLKVELKKLRKMKEFKPTMTFAFG 391
EKMKIEKEKTEDLLKEKDEILRKKE VEQEKLK ELKKL+KMKEFKP MTFAF
Sbjct: 55 EKMKIEKEKTEDLLKEKDEILRKKE-------VEQEKLKTELKKLQKMKEFKPNMTFAFS 107
Query: 392 QSLAQTEDDKKGKKKKKKECPETKRPSTPYILWCKDNWNEVKKENPDSDFKETSNILGAK 571
QSLAQTE++KKG KKKKK+C ETKRPSTPYILWCKDNWNEVKK+NP++DFKETSNILGAK
Sbjct: 108 QSLAQTEEEKKG-KKKKKDCAETKRPSTPYILWCKDNWNEVKKQNPEADFKETSNILGAK 166
Query: 572 WKTLSAEEKKPYEEKYKADKEAYLQVITKEKREREAMKLLEDEQKQKTAMELLDQYLHFV 751
WK +SAEEKKPYEEKY+ADKEAYLQVITKEKREREAMKLL+DEQKQKTAMELLDQYLHFV
Sbjct: 167 WKGISAEEKKPYEEKYQADKEAYLQVITKEKREREAMKLLDDEQKQKTAMELLDQYLHFV 226
Query: 752 QEAEQDNKK 778
QEAE DNKK
Sbjct: 227 QEAEHDNKK 235
>TAIR9_protein||AT4G23800.1 | Symbols: | high mobility group (HMG1/2) family
protein | chr4:12390228-12392516 FORWARD
Length = 457
Score = 380 bits (974), Expect = 8e-106
Identities = 190/247 (76%), Positives = 216/247 (87%), Gaps = 4/247 (1%)
Frame = +2
Query: 41 MATVAEAAPAKKSRNSRKALKQKNEIAESPLLLSSPAKGK-ETKKSYEKDLMEMQAMLEK 217
MAT A+ AP KK RNSRKALKQKNE+ E+P SP K ++ KS+E+DLMEMQ MLEK
Sbjct: 1 MATNADPAPTKKPRNSRKALKQKNELVETP---PSPVSVKGKSAKSFEQDLMEMQTMLEK 57
Query: 218 MKIEKEKTEDLLKEKDEILRKKEEELETRDVEQEKLKVELKKLRKMKEFKPTMTFAFGQS 397
MKIEK+KTE+LLKEKDEILRKKEEELETRD EQEKLKVELKKL+KMKEFKP MTFA GQS
Sbjct: 58 MKIEKDKTEELLKEKDEILRKKEEELETRDAEQEKLKVELKKLQKMKEFKPNMTFACGQS 117
Query: 398 LAQTEDDKKGKKKKKKECPETKRPSTPYILWCKDNWNEVKKENPDSDFKETSNILGAKWK 577
+ +K KKKKK+CPETKRPS+ Y+LWCKD W EVKKENP++DFKETSNILGAKWK
Sbjct: 118 SLTQAEQEKANKKKKKDCPETKRPSSSYVLWCKDQWTEVKKENPEADFKETSNILGAKWK 177
Query: 578 TLSAEEKKPYEEKYKADKEAYLQVITKEKREREAMKLLEDEQKQKTAMELLDQYLHFVQE 757
+LSAE+KKPYEE+Y+ +KEAYLQVI KEKRE+EAMKLLED+QKQ+TAMELLDQYL+FVQE
Sbjct: 178 SLSAEDKKPYEERYQVEKEAYLQVIAKEKREKEAMKLLEDDQKQRTAMELLDQYLNFVQE 237
Query: 758 AEQDNKK 778
AEQDNKK
Sbjct: 238 AEQDNKK 244
>TAIR9_protein||AT3G28730.1 | Symbols: ATHMG, SSRP1, NFD | ATHMG (ARABIDOPSIS
THALIANA HIGH MOBILITY GROUP); transcription factor |
chr3:10784954-10788498 FORWARD
Length = 647
Score = 68 bits (164), Expect = 6e-012
Identities = 38/121 (31%), Positives = 66/121 (54%), Gaps = 5/121 (4%)
Frame = +2
Query: 305 DVEQEKLKVELKKLRKMKEFKPTMTFAFGQSLAQTEDDKKGKKKKKKECPET-KRPSTPY 481
+++++ +K E KK + P +++A E K KK KKK+ P KR + +
Sbjct: 514 EIKEKSIKKEPKKEASSSKGLPPKR----KTVAADEGSSKRKKPKKKKDPNAPKRAMSGF 569
Query: 482 ILWCKDNWNEVKKENPDSDFKETSNILGAKWKTLSAEEKKPYEEKYKADKEAYLQVITKE 661
+ + + + +KKE+P F E +LG KW+ +SA++K+PYE K + DK+ Y I+
Sbjct: 570 MFFSQMERDNIKKEHPGIAFGEVGKVLGDKWRQMSADDKEPYEAKAQVDKQRYKDEISDY 629
Query: 662 K 664
K
Sbjct: 630 K 630
>TAIR9_protein||AT5G23420.1 | Symbols: HMGB6 | HMGB6; transcription factor |
chr5:7888712-7890111 REVERSE
Length = 242
Score = 55 bits (130), Expect = 6e-008
Identities = 44/137 (32%), Positives = 62/137 (45%), Gaps = 11/137 (8%)
Frame = +2
Query: 308 VEQEKLKVELKKLRKMKEFKPTMTFAFG---QSLAQTEDDKKGKKKKKKECPETKRPSTP 478
V E VE + K K + T + G + L +T D+KK K KRP T
Sbjct: 66 VNLEAQVVETQAEAKKKPAEKKKTTSDGPKPKRLKKTNDEKKSSSTSNK----PKRPLTA 121
Query: 479 YILWCKDNWNEVKKENPDSDFKETSNILGAKWKTLSAEEKKPYEEKYKADKEAYLQVITK 658
+ ++ D K E+ S K+ + I G KWK+L+ EEKK Y +K K Y K
Sbjct: 122 FFIFMSDFRKTFKSEHNGSLAKDAAKIGGEKWKSLTEEEKKVYLDKAAELKAEY----NK 177
Query: 659 EKREREAMKLLEDEQKQ 709
+A + EDE+KQ
Sbjct: 178 SLESNDADEEEEDEEKQ 194
>TAIR9_protein||AT1G62760.1 | Symbols: | invertase/pectin methylesterase
inhibitor family protein | chr1:23237574-23238512 REVERSE
Length = 313
Score = 51 bits (120), Expect = 8e-007
Identities = 42/107 (39%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Frame = -3
Query: 467 VSSSQDTPSSSSSSPSCRLQFVPKIDRKQKSW*A*TLSSFEASLAPP*ASPVP--RPSSR 294
+S S +PS S S PS P S +LS PP +SP+ PS
Sbjct: 27 LSPSSSSPSLSPSPPSSSPSSAPPSSLSPSSPPPLSLSPSSPPPPPPSSSPLSSLSPSLS 86
Query: 293 VPPPSSSGSRPSPSADPPSSPSRSSFSPTSPASPSGLSRMTSSFLSP 153
PPSSS S PS+ PSSP S SP+SP P S SS LSP
Sbjct: 87 PSPPSSSPSSAPPSSLSPSSPPPLSLSPSSPPPPPPSSSPLSS-LSP 132
Score = 48 bits (113), Expect = 5e-006
Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Frame = -3
Query: 359 LSSFEASLAPP*ASPVPRPSSRVPPPSSSGSRPSPSADPPSSPSRSSFSPTSPASPSGLS 180
+++ +SL+P +SP PS PPSSS S PS+ PSSP S SP+SP P S
Sbjct: 20 ITTSSSSLSPSSSSPSLSPS----PPSSSPSSAPPSSLSPSSPPPLSLSPSSPPPPPPSS 75
Query: 179 RMTSSFLSPLLAMITTTVTPRSHSSASM 96
SS LSP L+ + +P S +S+
Sbjct: 76 SPLSS-LSPSLSPSPPSSSPSSAPPSSL 102
>TAIR9_protein||AT1G76720.1 | Symbols: | GTP binding / GTPase/ translation
initiation factor | chr1:28794144-28798780 REVERSE
Length = 1192
Score = 49 bits (116), Expect = 2e-006
Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Frame = +2
Query: 56 EAAPAKKSRNSRKALKQKNEIAESPLLLSSPAKGKETKKSYEKDLMEMQAMLEKMKIEKE 235
+AA A S K KQ+ + E AKGK +K K + EMQ L + + +E
Sbjct: 312 KAAAAATSSVEAKEEKQEESVTEPLQPKKKDAKGKAAEKKIPKHVREMQEALARRQEAEE 371
Query: 236 KTEDLLKEKDEILRKKEEELETRDVEQEKLKVELKKLRKMKE 361
+ + KE++E LRK+EEE R E E E K+ RK KE
Sbjct: 372 RKK---KEEEEKLRKEEEE-RRRQEELEAQAEEAKRKRKEKE 409
>TAIR9_protein||AT1G76810.1 | Symbols: | eukaryotic translation initiation
factor 2 family protein / eIF-2 family protein | chr1:28831366-28836310
REVERSE
Length = 1295
Score = 49 bits (116), Expect = 2e-006
Identities = 38/103 (36%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
Frame = +2
Query: 53 AEAAPAKKSRNSRKALKQKNEIAESPLLLSSPAKGKETKKSYEKDLMEMQAMLEKMKIEK 232
A AA A S K KQ+ + E AKGK +K K + EMQ L + + +
Sbjct: 368 AAAAAAATSSVEVKEEKQEESVTEPLQPKKKDAKGKAAEKKIPKHVREMQEALARRQEAE 427
Query: 233 EKTEDLLKEKDEILRKKEEELETRDVEQEKLKVELKKLRKMKE 361
E+ + KE++E LRK+EEE R E E E K+ RK KE
Sbjct: 428 ERKK---KEEEEKLRKEEEE-RRRQEELEAQAEEAKRKRKEKE 466
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,233,609,797
Number of Sequences: 33410
Number of Extensions: 6233609797
Number of Successful Extensions: 221643266
Number of sequences better than 0.0: 0
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