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GenBank blast output of UN11485


BLASTX 7.6.2

Query= UN11485 /QuerySize=1281
        (1280 letters)

Database: GenBank nr;
          15,229,318 sequences; 5,219,829,378 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|8778340|gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]    335   9e-090
gi|13992688|gb|AAK51582.1|AC022352_18 Putative retroelement [Ory...    293   7e-077
gi|50878384|gb|AAT85159.1| unknown protein [Oryza sativa Japonic...    292   1e-076
gi|91795223|gb|ABE60891.1| putative polyprotein [Oryza sativa Ja...    292   1e-076
gi|115479893|ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japo...    290   4e-076
gi|108709232|gb|ABF97027.1| retrotransposon protein, putative, T...    288   2e-075
gi|22296822|gb|AAM94350.1| gag-pol polyprotein [Zea mays]              288   2e-075
gi|15340827|gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]       285   1e-074
gi|6705984|dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Ind...    285   1e-074
gi|15340828|gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]       284   2e-074
gi|15187182|gb|AAK91332.1|AC090441_14 Putative gag-pol polyprote...    284   3e-074
gi|34015213|gb|AAQ56407.1| putative gag-pol polyprotein [Oryza s...    283   5e-074
gi|53749310|gb|AAU90169.1| putative polyprotein [Oryza sativa Ja...    283   5e-074
gi|115392332|gb|ABI96971.1| putative gag-pol polyprotein [Tritic...    283   5e-074
gi|34015141|gb|AAQ56338.1| putative gag-pol polyprotein [Oryza s...    282   9e-074
gi|34015193|gb|AAQ56388.1| putative gag-pol polyprotein [Oryza s...    282   2e-073
gi|4325354|gb|AAD17351.1| contains similarity to retrovirus-rela...    269   8e-070
gi|56744298|gb|AAW28577.1| Putative gag-pol polyprotein, identic...    265   1e-068
gi|56744299|gb|AAW28578.1| Putative gag-pol polyprotein, identic...    265   1e-068
gi|113205445|gb|AAW28576.2| Gag-pol polyprotein, putative [Solan...    265   1e-068

>gi|8778340|gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]

          Length = 1887

 Score =  335 bits (859), Expect = 9e-090
 Identities = 155/197 (78%), Positives = 178/197 (90%)
 Frame = -3

Query:  594 FSKMAHFIACHKTDNALNIADLFFKEVVRLHGMPRSIVSDRDTKFLSYFWKTLWSKLETK 415
            FSKMAHFI CHKTD+A++IA+LFF+EVVRLHGMP++IVSDRDTKFLSYFWKTLWSKL TK
Sbjct: 1483 FSKMAHFIPCHKTDDAIHIANLFFREVVRLHGMPKTIVSDRDTKFLSYFWKTLWSKLGTK 1542

Query:  414 LMFSTTCHPQTDGQTEVVNRTLATLLRAVIKKNIKTWEDCLPHVEFAYNHSVHRATKFSP 235
            L+FSTTCHPQTDGQTEVVNRTL+TLLRA+IKKN+KTWEDCLPHVEFAYNHS+H A+KFSP
Sbjct: 1543 LLFSTTCHPQTDGQTEVVNRTLSTLLRALIKKNLKTWEDCLPHVEFAYNHSMHSASKFSP 1602

Query:  234 FQIVYGFNPLTPLDLLPIPYKEQINLDGKAKAEFVVSFHEQVKKNIEERTKEYARFANKG 55
            FQIVYGFNP TPLDL+P+P  E+++LDGK KAE V   HEQ KKNIEE+TK+YA+ ANK 
Sbjct: 1603 FQIVYGFNPTTPLDLMPLPLSERVSLDGKKKAELVQQIHEQAKKNIEEKTKQYAKHANKS 1662

Query:   54 RRGLILEPGDLVTIHLR 4
            R+ +I   GDLV IHLR
Sbjct: 1663 RKEVIFNEGDLVWIHLR 1679

>gi|13992688|gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa
        Japonica Group]

          Length = 2447

 Score =  293 bits (748), Expect = 7e-077
 Identities = 133/197 (67%), Positives = 161/197 (81%)
 Frame = -3

Query:  594 FSKMAHFIACHKTDNALNIADLFFKEVVRLHGMPRSIVSDRDTKFLSYFWKTLWSKLETK 415
            FSKMAHFI CHKTD+A +IADLFF+E+VRLHG+P +IVSDRDTKFLS+FW+TLW+KL TK
Sbjct: 1292 FSKMAHFIPCHKTDDASHIADLFFREIVRLHGVPNTIVSDRDTKFLSHFWRTLWAKLGTK 1351

Query:  414 LMFSTTCHPQTDGQTEVVNRTLATLLRAVIKKNIKTWEDCLPHVEFAYNHSVHRATKFSP 235
            L+FSTTCHPQTDGQTEVVNRTL+T+LRAV+KKNIK WE+CLPH+EFAYN S+H  TK  P
Sbjct: 1352 LLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEECLPHIEFAYNRSLHSTTKMCP 1411

Query:  234 FQIVYGFNPLTPLDLLPIPYKEQINLDGKAKAEFVVSFHEQVKKNIEERTKEYARFANKG 55
            FQIVYG  P  P+DL+P+P  E++N D K +AE ++  HE  K+NIE    +Y    +KG
Sbjct: 1412 FQIVYGLLPRAPIDLMPLPSSEKLNFDAKQRAELMLKLHETTKENIERMNAKYKFAGDKG 1471

Query:   54 RRGLILEPGDLVTIHLR 4
            RR L  EPGDLV +HLR
Sbjct: 1472 RRELTFEPGDLVWLHLR 1488

>gi|50878384|gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group]

          Length = 681

 Score =  292 bits (746), Expect = 1e-076
 Identities = 131/197 (66%), Positives = 165/197 (83%)
 Frame = -3

Query: 594 FSKMAHFIACHKTDNALNIADLFFKEVVRLHGMPRSIVSDRDTKFLSYFWKTLWSKLETK 415
           FSKMAHFI CHK+D+A +IA LFF E+VRLHGMP++IVSDRDTKFLSYFWKTLW+KL T+
Sbjct: 263 FSKMAHFIPCHKSDDASHIASLFFSEIVRLHGMPKTIVSDRDTKFLSYFWKTLWAKLGTR 322

Query: 414 LMFSTTCHPQTDGQTEVVNRTLATLLRAVIKKNIKTWEDCLPHVEFAYNHSVHRATKFSP 235
           L+FSTTCHPQTDGQTEVVNRTL+ LLRA+IKKN+K WE+CLPHVEFAYN +VH  T   P
Sbjct: 323 LLFSTTCHPQTDGQTEVVNRTLSMLLRALIKKNLKEWEECLPHVEFAYNRAVHSTTNMCP 382

Query: 234 FQIVYGFNPLTPLDLLPIPYKEQINLDGKAKAEFVVSFHEQVKKNIEERTKEYARFANKG 55
           F++VYGF PL+P+DLLP+P +E+ +++   +A +V   HE+ K+ IE+R+K YA +ANK 
Sbjct: 383 FEVVYGFKPLSPIDLLPLPLQERSDMEASKRATYVKKIHEKTKEAIEKRSKYYAAWANKN 442

Query:  54 RRGLILEPGDLVTIHLR 4
           R+ +  EPGDLV +HLR
Sbjct: 443 RKKVTFEPGDLVWVHLR 459

>gi|91795223|gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]

          Length = 1713

 Score =  292 bits (746), Expect = 1e-076
 Identities = 131/197 (66%), Positives = 165/197 (83%)
 Frame = -3

Query:  594 FSKMAHFIACHKTDNALNIADLFFKEVVRLHGMPRSIVSDRDTKFLSYFWKTLWSKLETK 415
            FSKMAHFI CHK+D+A +IA LFF E+VRLHGMP++IVSDRDTKFLSYFWKTLW+KL T+
Sbjct: 1295 FSKMAHFIPCHKSDDASHIASLFFSEIVRLHGMPKTIVSDRDTKFLSYFWKTLWAKLGTR 1354

Query:  414 LMFSTTCHPQTDGQTEVVNRTLATLLRAVIKKNIKTWEDCLPHVEFAYNHSVHRATKFSP 235
            L+FSTTCHPQTDGQTEVVNRTL+ LLRA+IKKN+K WE+CLPHVEFAYN +VH  T   P
Sbjct: 1355 LLFSTTCHPQTDGQTEVVNRTLSMLLRALIKKNLKEWEECLPHVEFAYNRAVHSTTNMCP 1414

Query:  234 FQIVYGFNPLTPLDLLPIPYKEQINLDGKAKAEFVVSFHEQVKKNIEERTKEYARFANKG 55
            F++VYGF PL+P+DLLP+P +E+ +++   +A +V   HE+ K+ IE+R+K YA +ANK 
Sbjct: 1415 FEVVYGFKPLSPIDLLPLPLQERSDMEASKRATYVKKIHEKTKEAIEKRSKYYAAWANKN 1474

Query:   54 RRGLILEPGDLVTIHLR 4
            R+ +  EPGDLV +HLR
Sbjct: 1475 RKKVTFEPGDLVWVHLR 1491

>gi|115479893|ref|NP_001063540.1| Os09g0491900 [Oryza sativa Japonica Group]

          Length = 681

 Score =  290 bits (741), Expect = 4e-076
 Identities = 131/197 (66%), Positives = 163/197 (82%)
 Frame = -3

Query: 594 FSKMAHFIACHKTDNALNIADLFFKEVVRLHGMPRSIVSDRDTKFLSYFWKTLWSKLETK 415
           FSKMAHFI CHK+D+A +IA LFF E+VRLHGMP++IVSDRDTKFLSYFWKTLW+KL T+
Sbjct: 263 FSKMAHFIPCHKSDDASHIASLFFSEIVRLHGMPKTIVSDRDTKFLSYFWKTLWAKLGTR 322

Query: 414 LMFSTTCHPQTDGQTEVVNRTLATLLRAVIKKNIKTWEDCLPHVEFAYNHSVHRATKFSP 235
           L+FSTTCHPQTDGQTEVVNRTL+ LLRA+IKKN+K WE+CLPHVEFAYN +VH  T   P
Sbjct: 323 LLFSTTCHPQTDGQTEVVNRTLSMLLRALIKKNLKEWEECLPHVEFAYNRAVHSTTNMCP 382

Query: 234 FQIVYGFNPLTPLDLLPIPYKEQINLDGKAKAEFVVSFHEQVKKNIEERTKEYARFANKG 55
           F++VYGF PL P+DLLP+P +E+ +++    A +V   HE+ K+ IE+R+K YA +ANK 
Sbjct: 383 FEVVYGFKPLAPIDLLPLPLQERSDMEASKHATYVKKIHEKTKEAIEKRSKYYAAWANKD 442

Query:  54 RRGLILEPGDLVTIHLR 4
           R+ +  EPGDLV +HLR
Sbjct: 443 RKKVTFEPGDLVWVHLR 459

>gi|108709232|gb|ABF97027.1| retrotransposon protein, putative, Ty3-gypsy
        subclass [Oryza sativa Japonica Group]

          Length = 889

 Score =  288 bits (736), Expect = 2e-075
 Identities = 130/197 (65%), Positives = 161/197 (81%)
 Frame = -3

Query: 594 FSKMAHFIACHKTDNALNIADLFFKEVVRLHGMPRSIVSDRDTKFLSYFWKTLWSKLETK 415
           FSKMAHFI CHK+D+A ++ADLFF+E+VRLHG+P +IVSDRDTKFLS+FW+TLW+KL TK
Sbjct: 633 FSKMAHFIPCHKSDDATHVADLFFREIVRLHGVPNTIVSDRDTKFLSHFWRTLWAKLGTK 692

Query: 414 LMFSTTCHPQTDGQTEVVNRTLATLLRAVIKKNIKTWEDCLPHVEFAYNHSVHRATKFSP 235
           L+FSTTCHPQTDGQTEVVNRTL+T+LRAV+KKNIK WE+CLPHVEFAYNHS H  TK  P
Sbjct: 693 LLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEECLPHVEFAYNHSQHSTTKKCP 752

Query: 234 FQIVYGFNPLTPLDLLPIPYKEQINLDGKAKAEFVVSFHEQVKKNIEERTKEYARFANKG 55
           F+IVYG  P  P+DLLP+P  E++N D K +AE ++  HE  K+NIE    +Y    +KG
Sbjct: 753 FEIVYGLLPRAPIDLLPLPTSERVNFDAKHRAELMLKLHETTKENIERMNIKYKLAGSKG 812

Query:  54 RRGLILEPGDLVTIHLR 4
           ++ +  EPGDLV +HLR
Sbjct: 813 KKHVAFEPGDLVWLHLR 829

>gi|22296822|gb|AAM94350.1| gag-pol polyprotein [Zea mays]

          Length = 1618

 Score =  288 bits (735), Expect = 2e-075
 Identities = 130/197 (65%), Positives = 159/197 (80%)
 Frame = -3

Query:  594 FSKMAHFIACHKTDNALNIADLFFKEVVRLHGMPRSIVSDRDTKFLSYFWKTLWSKLETK 415
            FSKMAHFI CHKTD+A +IADLFF+E+VRLHG+P +IVSDRD KFLS+FW+TLW+KL TK
Sbjct: 1295 FSKMAHFIPCHKTDDATHIADLFFREIVRLHGVPNTIVSDRDAKFLSHFWRTLWAKLGTK 1354

Query:  414 LMFSTTCHPQTDGQTEVVNRTLATLLRAVIKKNIKTWEDCLPHVEFAYNHSVHRATKFSP 235
            L+FSTTCHPQTDGQTEVVNRTL+T+LRAV+KKNIK WEDCLPH+EFAYN S+H  TK  P
Sbjct: 1355 LLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEDCLPHIEFAYNRSLHSTTKMCP 1414

Query:  234 FQIVYGFNPLTPLDLLPIPYKEQINLDGKAKAEFVVSFHEQVKKNIEERTKEYARFANKG 55
            FQIVYG  P  P+DL+P+P  E++N D   +AE ++  HE  K+NIE     Y   ++KG
Sbjct: 1415 FQIVYGLLPRAPIDLMPLPSSEKLNFDATRRAELMLKLHETTKENIERMNARYKFASDKG 1474

Query:   54 RRGLILEPGDLVTIHLR 4
            R+ +  EPGDLV +HLR
Sbjct: 1475 RKEINFEPGDLVWLHLR 1491

>gi|15340827|gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]

          Length = 1720

 Score =  285 bits (729), Expect = 1e-074
 Identities = 126/197 (63%), Positives = 158/197 (80%)
 Frame = -3

Query:  594 FSKMAHFIACHKTDNALNIADLFFKEVVRLHGMPRSIVSDRDTKFLSYFWKTLWSKLETK 415
            FSKMAHFI CHK+D+A N+ADLFF+E++RLHG+P +IVSDRD KFLS+FW+ LW+KL TK
Sbjct: 1351 FSKMAHFIPCHKSDDAANVADLFFREIIRLHGVPNTIVSDRDAKFLSHFWRCLWAKLGTK 1410

Query:  414 LMFSTTCHPQTDGQTEVVNRTLATLLRAVIKKNIKTWEDCLPHVEFAYNHSVHRATKFSP 235
            L+FSTTCHPQTDGQTEVVNR+L+T+LRAV+K NIK WE+CLPH+EFAYN S+H  TK  P
Sbjct: 1411 LLFSTTCHPQTDGQTEVVNRSLSTMLRAVLKNNIKLWEECLPHIEFAYNRSLHSTTKMCP 1470

Query:  234 FQIVYGFNPLTPLDLLPIPYKEQINLDGKAKAEFVVSFHEQVKKNIEERTKEYARFANKG 55
            F+IVYGF P  P+DLLPIP  E++N D K +AE ++  HE  K+NIE     Y    +KG
Sbjct: 1471 FEIVYGFLPRAPIDLLPIPSSEKVNFDAKERAELILKMHELTKENIERMNARYKLAGDKG 1530

Query:   54 RRGLILEPGDLVTIHLR 4
            R+ ++  PGDLV +HLR
Sbjct: 1531 RKHVVFAPGDLVWLHLR 1547

>gi|6705984|dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]

          Length = 1587

 Score =  285 bits (728), Expect = 1e-074
 Identities = 129/197 (65%), Positives = 160/197 (81%)
 Frame = -3

Query:  594 FSKMAHFIACHKTDNALNIADLFFKEVVRLHGMPRSIVSDRDTKFLSYFWKTLWSKLETK 415
            FSKMAHFI CHK+D+A ++ADLFF+E+VRLHG+P +IVSDRDTKFLS+FW+TLW+KL TK
Sbjct: 1320 FSKMAHFIPCHKSDDATHVADLFFREIVRLHGVPNTIVSDRDTKFLSHFWRTLWAKLGTK 1379

Query:  414 LMFSTTCHPQTDGQTEVVNRTLATLLRAVIKKNIKTWEDCLPHVEFAYNHSVHRATKFSP 235
            L+FSTTCHPQTDGQTEVVNRTL+T+LRAV+KKNIK WE+CLPHVEFAYN S H  TK  P
Sbjct: 1380 LLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEECLPHVEFAYNRSQHSTTKKCP 1439

Query:  234 FQIVYGFNPLTPLDLLPIPYKEQINLDGKAKAEFVVSFHEQVKKNIEERTKEYARFANKG 55
            F+IVYG  P  P+DLLP+P  E++N D K +AE ++  HE  K+NIE    +Y    +KG
Sbjct: 1440 FEIVYGLLPRAPIDLLPLPTSERVNFDAKYRAELMLKLHETTKENIERMNIKYKLAGSKG 1499

Query:   54 RRGLILEPGDLVTIHLR 4
            ++ +  EPGDLV +HLR
Sbjct: 1500 KKHVAFEPGDLVWLHLR 1516

>gi|15340828|gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]

          Length = 1717

 Score =  284 bits (726), Expect = 2e-074
 Identities = 125/197 (63%), Positives = 158/197 (80%)
 Frame = -3

Query:  594 FSKMAHFIACHKTDNALNIADLFFKEVVRLHGMPRSIVSDRDTKFLSYFWKTLWSKLETK 415
            FSKMAHFI CHK+D+A N+ADLFF+E++RLHG+P +IVSDRD KFLS+FW+ LW+KL TK
Sbjct: 1348 FSKMAHFIPCHKSDDAANVADLFFREIIRLHGVPNTIVSDRDAKFLSHFWRCLWAKLGTK 1407

Query:  414 LMFSTTCHPQTDGQTEVVNRTLATLLRAVIKKNIKTWEDCLPHVEFAYNHSVHRATKFSP 235
            L+FSTTCHPQTDGQTEVVNR+L+T+LRAV+K N+K WE+CLPH+EFAYN S+H  TK  P
Sbjct: 1408 LLFSTTCHPQTDGQTEVVNRSLSTMLRAVLKTNLKLWEECLPHIEFAYNRSLHSTTKMCP 1467

Query:  234 FQIVYGFNPLTPLDLLPIPYKEQINLDGKAKAEFVVSFHEQVKKNIEERTKEYARFANKG 55
            F+IVYGF P  P+DLLPIP  E++N D K +AE ++  HE  K+NIE     Y    +KG
Sbjct: 1468 FEIVYGFLPRAPIDLLPIPSSEKVNFDAKERAELILKMHELTKENIERMNARYKLAGDKG 1527

Query:   54 RRGLILEPGDLVTIHLR 4
            R+ ++  PGDLV +HLR
Sbjct: 1528 RKHVVFAPGDLVWLHLR 1544

>gi|15187182|gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza
        sativa Japonica Group]

          Length = 1708

 Score =  284 bits (725), Expect = 3e-074
 Identities = 129/197 (65%), Positives = 159/197 (80%)
 Frame = -3

Query:  594 FSKMAHFIACHKTDNALNIADLFFKEVVRLHGMPRSIVSDRDTKFLSYFWKTLWSKLETK 415
            FSKMAHFI CHK+D+A ++ADLFF+E+VRLHG+P +IVSDRDTKFLS+FW+TLW+KL TK
Sbjct: 1320 FSKMAHFIPCHKSDDATHVADLFFREIVRLHGVPNTIVSDRDTKFLSHFWRTLWAKLGTK 1379

Query:  414 LMFSTTCHPQTDGQTEVVNRTLATLLRAVIKKNIKTWEDCLPHVEFAYNHSVHRATKFSP 235
            L+FSTTCHPQTDGQTEVVNRTL+T+LRAV+KKNIK WE+CLPHVEFAYN S H  TK  P
Sbjct: 1380 LLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEECLPHVEFAYNRSQHSTTKKCP 1439

Query:  234 FQIVYGFNPLTPLDLLPIPYKEQINLDGKAKAEFVVSFHEQVKKNIEERTKEYARFANKG 55
            F+IVYG  P  P+DLLP+P  E++N D K  AE ++  HE  K+NIE    +Y    +KG
Sbjct: 1440 FEIVYGLLPRAPIDLLPLPTSERVNFDAKYHAELMLKLHETTKENIERMNIKYKLAGSKG 1499

Query:   54 RRGLILEPGDLVTIHLR 4
            ++ +  EPGDLV +HLR
Sbjct: 1500 KKHVAFEPGDLVWLHLR 1516

>gi|34015213|gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japonica
        Group]

          Length = 1619

 Score =  283 bits (723), Expect = 5e-074
 Identities = 128/197 (64%), Positives = 160/197 (81%)
 Frame = -3

Query:  594 FSKMAHFIACHKTDNALNIADLFFKEVVRLHGMPRSIVSDRDTKFLSYFWKTLWSKLETK 415
            FSKMAHFI CHK+D+A ++ADLFF+E+VRLHG+P +IVSDRDTKFLS+FW+TLW+KL TK
Sbjct: 1216 FSKMAHFIPCHKSDDATHVADLFFREIVRLHGVPNTIVSDRDTKFLSHFWRTLWAKLGTK 1275

Query:  414 LMFSTTCHPQTDGQTEVVNRTLATLLRAVIKKNIKTWEDCLPHVEFAYNHSVHRATKFSP 235
            L+FSTTCHPQTDGQTEVVNRT++T+LRAV+KKNIK WE+CLPHVEFAYN S H  TK  P
Sbjct: 1276 LLFSTTCHPQTDGQTEVVNRTVSTMLRAVLKKNIKMWEECLPHVEFAYNRSQHSTTKKCP 1335

Query:  234 FQIVYGFNPLTPLDLLPIPYKEQINLDGKAKAEFVVSFHEQVKKNIEERTKEYARFANKG 55
            F+IVYG  P  P+DLLP+P  E++N D K +AE ++  HE  K+NIE    +Y    +KG
Sbjct: 1336 FEIVYGLLPRAPIDLLPLPTLERVNFDAKYRAELMLKLHETTKENIERMNIKYKLAGSKG 1395

Query:   54 RRGLILEPGDLVTIHLR 4
            ++ +  EPGDLV +HLR
Sbjct: 1396 KKHVAFEPGDLVWLHLR 1412

>gi|53749310|gb|AAU90169.1| putative polyprotein [Oryza sativa Japonica Group]

          Length = 1154

 Score =  283 bits (723), Expect = 5e-074
 Identities = 127/197 (64%), Positives = 162/197 (82%)
 Frame = -3

Query:  594 FSKMAHFIACHKTDNALNIADLFFKEVVRLHGMPRSIVSDRDTKFLSYFWKTLWSKLETK 415
            FSKMAHFI C+K+D+A ++ADLFF+EVVRLHG+PR+IVSDRD KF+SYFWKTLW+KL TK
Sbjct:  894 FSKMAHFIPCNKSDDASHVADLFFREVVRLHGVPRTIVSDRDVKFMSYFWKTLWAKLGTK 953

Query:  414 LMFSTTCHPQTDGQTEVVNRTLATLLRAVIKKNIKTWEDCLPHVEFAYNHSVHRATKFSP 235
            L+FSTTCH Q DGQ EVVNRTL+ LLR +IKKN+K WEDCLPHVEFAYN  VH  T+ SP
Sbjct:  954 LLFSTTCHSQIDGQMEVVNRTLSMLLRMMIKKNLKEWEDCLPHVEFAYNRVVHSTTQLSP 1013

Query:  234 FQIVYGFNPLTPLDLLPIPYKEQINLDGKAKAEFVVSFHEQVKKNIEERTKEYARFANKG 55
            F++VYGFNP+TPLDLLP+P +E+ N++   +A++V   HE+ K+ IE   + YA  ANK 
Sbjct: 1014 FEVVYGFNPITPLDLLPLPLQERANMEATKRADYVKKMHEKTKETIERIIQSYAAKANKD 1073

Query:   54 RRGLILEPGDLVTIHLR 4
            R+ ++ +PG+LV +HLR
Sbjct: 1074 RKKMLFQPGELVWVHLR 1090

>gi|115392332|gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum
        subsp. aegilopoides]

          Length = 1704

 Score =  283 bits (723), Expect = 5e-074
 Identities = 124/197 (62%), Positives = 159/197 (80%)
 Frame = -3

Query:  594 FSKMAHFIACHKTDNALNIADLFFKEVVRLHGMPRSIVSDRDTKFLSYFWKTLWSKLETK 415
            FSKMAHFI CHK+D+A+N+ADLFF+E++RLHG+P +IVSDRDTKFLS+FW+ LW+KL  K
Sbjct: 1336 FSKMAHFIPCHKSDDAVNVADLFFREIIRLHGVPNTIVSDRDTKFLSHFWRCLWAKLGNK 1395

Query:  414 LMFSTTCHPQTDGQTEVVNRTLATLLRAVIKKNIKTWEDCLPHVEFAYNHSVHRATKFSP 235
            L+FSTTCHPQTDGQTEVVNRTL+T+LRAV+K N K WE+CLPH+EFAYN S+H  TK  P
Sbjct: 1396 LLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKNNKKMWEECLPHIEFAYNRSLHSTTKMCP 1455

Query:  234 FQIVYGFNPLTPLDLLPIPYKEQINLDGKAKAEFVVSFHEQVKKNIEERTKEYARFANKG 55
            F+IVYGF P  P+DLLP+P  E++N D K ++E ++  HE  K+NIE    +Y    +KG
Sbjct: 1456 FEIVYGFLPRAPIDLLPLPSSEKVNFDAKERSELILKIHELTKENIERMNAKYKLARDKG 1515

Query:   54 RRGLILEPGDLVTIHLR 4
            R+ ++  PGDLV +HLR
Sbjct: 1516 RKHVVFAPGDLVWLHLR 1532

>gi|34015141|gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japonica
        Group]

          Length = 1619

 Score =  282 bits (721), Expect = 9e-074
 Identities = 129/197 (65%), Positives = 157/197 (79%)
 Frame = -3

Query:  594 FSKMAHFIACHKTDNALNIADLFFKEVVRLHGMPRSIVSDRDTKFLSYFWKTLWSKLETK 415
            FSKM HFI CHKTD+A +IADLFF+E+VRLHG+P +IVSDRDTKFLS+FW+TLW+KL TK
Sbjct: 1271 FSKMVHFIPCHKTDDASHIADLFFREIVRLHGVPNTIVSDRDTKFLSHFWRTLWAKLGTK 1330

Query:  414 LMFSTTCHPQTDGQTEVVNRTLATLLRAVIKKNIKTWEDCLPHVEFAYNHSVHRATKFSP 235
            L+FSTTCHPQTDGQ EVVNRTL+T+LRAV+KKNIK WE+CLPH+EFA N S+H  TK  P
Sbjct: 1331 LLFSTTCHPQTDGQIEVVNRTLSTMLRAVLKKNIKMWEECLPHIEFACNRSLHSTTKMCP 1390

Query:  234 FQIVYGFNPLTPLDLLPIPYKEQINLDGKAKAEFVVSFHEQVKKNIEERTKEYARFANKG 55
            FQIVY   P  P+DL+P+P  E++N D K +AE ++  HE  K+NIE    +Y    +KG
Sbjct: 1391 FQIVYSLLPRAPIDLMPLPSSEKLNFDAKQRAELMLKLHETTKENIERMNAKYKFAGDKG 1450

Query:   54 RRGLILEPGDLVTIHLR 4
            RR L  EPGDLV +HLR
Sbjct: 1451 RRELNFEPGDLVWLHLR 1467

>gi|34015193|gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica
        Group]

          Length = 1616

 Score =  282 bits (719), Expect = 2e-073
 Identities = 128/197 (64%), Positives = 158/197 (80%)
 Frame = -3

Query:  594 FSKMAHFIACHKTDNALNIADLFFKEVVRLHGMPRSIVSDRDTKFLSYFWKTLWSKLETK 415
            FSKMAHFI CHK+D+A ++ADLFF+E+VRLHG+P +IVSDRDTKFLS+FW+TLW+KL TK
Sbjct: 1320 FSKMAHFIPCHKSDDATHVADLFFREIVRLHGVPNTIVSDRDTKFLSHFWRTLWAKLGTK 1379

Query:  414 LMFSTTCHPQTDGQTEVVNRTLATLLRAVIKKNIKTWEDCLPHVEFAYNHSVHRATKFSP 235
             +FSTTCHPQTDGQTEVVNRTL+T+LRAV+KKNIK WE+CLPHVEFAYN S H  TK  P
Sbjct: 1380 FLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIKMWEECLPHVEFAYNRSQHSTTKKCP 1439

Query:  234 FQIVYGFNPLTPLDLLPIPYKEQINLDGKAKAEFVVSFHEQVKKNIEERTKEYARFANKG 55
            F+IVYG  P  P+DLLP P  E++N D K +AE ++  HE  K+NIE    +Y    +KG
Sbjct: 1440 FEIVYGLLPRAPIDLLPHPTSERVNFDAKYRAELMLKLHETTKENIERMNIKYKLAGSKG 1499

Query:   54 RRGLILEPGDLVTIHLR 4
            ++ +  EPGDLV +HLR
Sbjct: 1500 KKHVAFEPGDLVWLHLR 1516

>gi|4325354|gb|AAD17351.1| contains similarity to retrovirus-related
        polyproteins and to CCHC zinc finger protein (Pfam: PF00098,
        Score=16.3, E=0.051, E= 1) [Arabidopsis thaliana]

          Length = 1138

 Score =  269 bits (687), Expect = 8e-070
 Identities = 122/139 (87%), Positives = 136/139 (97%)
 Frame = -3

Query: 594 FSKMAHFIACHKTDNALNIADLFFKEVVRLHGMPRSIVSDRDTKFLSYFWKTLWSKLETK 415
           FSKMAHFI CHKTD+A++IA+LFF+EVVRLHGMP++IVSDRDTKFLSYFWKTLWSKL TK
Sbjct: 858 FSKMAHFIPCHKTDDAMHIANLFFREVVRLHGMPKTIVSDRDTKFLSYFWKTLWSKLGTK 917

Query: 414 LMFSTTCHPQTDGQTEVVNRTLATLLRAVIKKNIKTWEDCLPHVEFAYNHSVHRATKFSP 235
           L+FSTTCHPQTDGQTEVVNRTL+TLLRA+IKKN+KTWEDCLPHVEFAYNHSVH ATKFSP
Sbjct: 918 LLFSTTCHPQTDGQTEVVNRTLSTLLRALIKKNLKTWEDCLPHVEFAYNHSVHSATKFSP 977

Query: 234 FQIVYGFNPLTPLDLLPIP 178
           FQIVYGFNP+TPLDL+P+P
Sbjct: 978 FQIVYGFNPITPLDLMPLP 996

>gi|56744298|gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum
        demissum]

          Length = 1588

 Score =  265 bits (676), Expect = 1e-068
 Identities = 123/197 (62%), Positives = 156/197 (79%)
 Frame = -3

Query:  594 FSKMAHFIACHKTDNALNIADLFFKEVVRLHGMPRSIVSDRDTKFLSYFWKTLWSKLETK 415
            FSKMA FI C KT++A ++ADLF KEVV+LHG+PR+IVSDRD KFLS+FW+ LW KL TK
Sbjct: 1245 FSKMARFIPCKKTNDASHVADLFVKEVVKLHGIPRTIVSDRDAKFLSHFWRILWGKLGTK 1304

Query:  414 LMFSTTCHPQTDGQTEVVNRTLATLLRAVIKKNIKTWEDCLPHVEFAYNHSVHRATKFSP 235
            L+FST+CHPQTDGQTEVVNRTL  +LRA++K  + +WED LP VEFAYN + H +T  +P
Sbjct: 1305 LLFSTSCHPQTDGQTEVVNRTLGNMLRAILKGKLTSWEDYLPIVEFAYNRTFHSSTGKTP 1364

Query:  234 FQIVYGFNPLTPLDLLPIPYKEQINLDGKAKAEFVVSFHEQVKKNIEERTKEYARFANKG 55
            F++VYGFNPLTPLDLLP+P  +  NLDGK KA+ +   HEQ +  IE++ KE A   NKG
Sbjct: 1365 FEVVYGFNPLTPLDLLPLPTNDFANLDGKKKADMMKKIHEQTRLAIEKKNKEVALRRNKG 1424

Query:   54 RRGLILEPGDLVTIHLR 4
            R+ +I +PGDLV +H+R
Sbjct: 1425 RKYVIFKPGDLVWVHMR 1441

>gi|56744299|gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum
        demissum]

          Length = 1588

 Score =  265 bits (676), Expect = 1e-068
 Identities = 123/197 (62%), Positives = 156/197 (79%)
 Frame = -3

Query:  594 FSKMAHFIACHKTDNALNIADLFFKEVVRLHGMPRSIVSDRDTKFLSYFWKTLWSKLETK 415
            FSKMA FI C KT++A ++ADLF KEVV+LHG+PR+IVSDRD KFLS+FW+ LW KL TK
Sbjct: 1245 FSKMARFIPCKKTNDASHVADLFVKEVVKLHGIPRTIVSDRDAKFLSHFWRILWGKLGTK 1304

Query:  414 LMFSTTCHPQTDGQTEVVNRTLATLLRAVIKKNIKTWEDCLPHVEFAYNHSVHRATKFSP 235
            L+FST+CHPQTDGQTEVVNRTL  +LRA++K  + +WED LP VEFAYN + H +T  +P
Sbjct: 1305 LLFSTSCHPQTDGQTEVVNRTLGNMLRAILKGKLTSWEDYLPIVEFAYNRTFHSSTGKTP 1364

Query:  234 FQIVYGFNPLTPLDLLPIPYKEQINLDGKAKAEFVVSFHEQVKKNIEERTKEYARFANKG 55
            F++VYGFNPLTPLDLLP+P  +  NLDGK KA+ +   HEQ +  IE++ KE A   NKG
Sbjct: 1365 FEVVYGFNPLTPLDLLPLPTNDFANLDGKKKADMMKKIHEQTRLAIEKKNKEVALRRNKG 1424

Query:   54 RRGLILEPGDLVTIHLR 4
            R+ +I +PGDLV +H+R
Sbjct: 1425 RKYVIFKPGDLVWVHMR 1441

>gi|113205445|gb|AAW28576.2| Gag-pol polyprotein, putative [Solanum demissum]

          Length = 1096

 Score =  265 bits (676), Expect = 1e-068
 Identities = 123/197 (62%), Positives = 156/197 (79%)
 Frame = -3

Query: 594 FSKMAHFIACHKTDNALNIADLFFKEVVRLHGMPRSIVSDRDTKFLSYFWKTLWSKLETK 415
           FSKMA FI C KT++A ++ADLF KEVV+LHG+PR+IVSDRD KFLS+FW+ LW KL TK
Sbjct: 753 FSKMARFIPCKKTNDASHVADLFVKEVVKLHGIPRTIVSDRDAKFLSHFWRILWGKLGTK 812

Query: 414 LMFSTTCHPQTDGQTEVVNRTLATLLRAVIKKNIKTWEDCLPHVEFAYNHSVHRATKFSP 235
           L+FST+CHPQTDGQTEVVNRTL  +LRA++K  + +WED LP VEFAYN + H +T  +P
Sbjct: 813 LLFSTSCHPQTDGQTEVVNRTLGNMLRAILKGKLTSWEDYLPIVEFAYNRTFHSSTGKTP 872

Query: 234 FQIVYGFNPLTPLDLLPIPYKEQINLDGKAKAEFVVSFHEQVKKNIEERTKEYARFANKG 55
           F++VYGFNPLTPLDLLP+P  +  NLDGK KA+ +   HEQ +  IE++ KE A   NKG
Sbjct: 873 FEVVYGFNPLTPLDLLPLPTNDFANLDGKKKADMMKKIHEQTRLAIEKKNKEVALRRNKG 932

Query:  54 RRGLILEPGDLVTIHLR 4
           R+ +I +PGDLV +H+R
Sbjct: 933 RKYVIFKPGDLVWVHMR 949

  Database: GenBank nr
    Posted date:  Thu Sep 08 23:06:31 2011
  Number of letters in database: 5,219,829,378
  Number of sequences in database:  15,229,318

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,313,363,328,120
Number of Sequences: 15229318
Number of Extensions: 1313363328120
Number of Successful Extensions: 373990951
Number of sequences better than 0.0: 0