BLASTX 7.6.2
Query= UN11516 /QuerySize=1118
(1117 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297825411|ref|XP_002880588.1| ATRPA2/ROR1/RPA2 [Arabidopsis l... 465 6e-129
gi|18400560|ref|NP_565571.1| replicon protein A2 [Arabidopsis th... 456 3e-126
gi|225446038|ref|XP_002268721.1| PREDICTED: hypothetical protein... 272 1e-070
gi|225429793|ref|XP_002282796.1| PREDICTED: hypothetical protein... 265 1e-068
gi|255634690|gb|ACU17707.1| unknown [Glycine max] 260 4e-067
gi|68299229|emb|CAJ13715.1| putative replication factor A [Capsi... 247 3e-063
gi|224121196|ref|XP_002330767.1| predicted protein [Populus tric... 245 1e-062
gi|31790111|gb|AAP58374.1| RPA 32kDa [Pisum sativum] 238 2e-060
gi|255574103|ref|XP_002527967.1| Replication protein A 30 kDa su... 213 4e-053
gi|294460336|gb|ADE75749.1| unknown [Picea sitchensis] 201 2e-049
gi|330318724|gb|AEC11022.1| replication protein a 30 kda subunit... 195 2e-047
gi|297832926|ref|XP_002884345.1| hypothetical protein ARALYDRAFT... 194 3e-047
gi|18396383|ref|NP_566188.1| replication factor A2 [Arabidopsis ... 188 1e-045
gi|115450003|ref|NP_001048604.1| Os02g0829100 [Oryza sativa Japo... 182 1e-043
gi|222623970|gb|EEE58102.1| hypothetical protein OsJ_08977 [Oryz... 182 1e-043
gi|218191867|gb|EEC74294.1| hypothetical protein OsI_09546 [Oryz... 182 1e-043
gi|194693140|gb|ACF80654.1| unknown [Zea mays] 174 3e-041
gi|326520341|dbj|BAK07429.1| predicted protein [Hordeum vulgare ... 173 6e-041
gi|242067082|ref|XP_002454830.1| hypothetical protein SORBIDRAFT... 172 1e-040
gi|334185046|ref|NP_001189796.1| replication factor A2 [Arabidop... 164 3e-038
>gi|297825411|ref|XP_002880588.1| ATRPA2/ROR1/RPA2 [Arabidopsis lyrata subsp.
lyrata]
Length = 279
Score = 465 bits (1196), Expect = 6e-129
Identities = 234/280 (83%), Positives = 252/280 (90%), Gaps = 9/280 (3%)
Frame = +3
Query: 72 MFSNSQFEPNSAFSGGGFMSSQPTQPYESSSSSSSTT--KGIVPVTVKQINESSHSGGEK 245
MFS+SQFEPNSAFSGGGFMSSQP+Q YESSSS++ +G+VPVTVKQI E + GEK
Sbjct: 1 MFSSSQFEPNSAFSGGGFMSSQPSQAYESSSSTAKNREFQGLVPVTVKQITECFQTSGEK 60
Query: 246 SGIVINGIELTNVSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESVQ 425
SG+VINGI LTNVSLVGLVCDKDVSKVTEV+FTLDDGTGRIDCKRWVNE+FDAREMESV+
Sbjct: 61 SGLVINGISLTNVSLVGLVCDKDVSKVTEVRFTLDDGTGRIDCKRWVNETFDAREMESVR 120
Query: 426 DGTYVRLNGHLKTFQGNQQLLVFSVRPIVDFNEVTFHYIECIHFYSKNSESQLGQQVGDA 605
DGTYVR+NGHLKTFQG QLLVFSVRPI+DFNEVTFHYIECIHFYS+NSESQ GQQVGD
Sbjct: 121 DGTYVRVNGHLKTFQGKTQLLVFSVRPIMDFNEVTFHYIECIHFYSQNSESQ-GQQVGDV 179
Query: 606 TQSHTL------NANQATTLNPVIPSQNSDGNGRKNLDDMILDYLKQPACTARQQGIHLD 767
TQS N NQAT LNPV+ SQN+DGNGRKNLDDMILDYLKQPACTARQQGIH+D
Sbjct: 180 TQSVNTTFQGGSNTNQATPLNPVVSSQNNDGNGRKNLDDMILDYLKQPACTARQQGIHID 239
Query: 768 EIAQQLKVPKNKLEGVIQSLEGDGLIYSTIDEYHFKHVEL 887
EIAQQLKVPKNKLEGV+QSLEGDGLIYSTIDEYHFKHVEL
Sbjct: 240 EIAQQLKVPKNKLEGVVQSLEGDGLIYSTIDEYHFKHVEL 279
>gi|18400560|ref|NP_565571.1| replicon protein A2 [Arabidopsis thaliana]
Length = 279
Score = 456 bits (1173), Expect = 3e-126
Identities = 230/280 (82%), Positives = 249/280 (88%), Gaps = 9/280 (3%)
Frame = +3
Query: 72 MFSNSQFEPNSAFSGGGFMSSQPTQPYESSSSSSSTT--KGIVPVTVKQINESSHSGGEK 245
MFS+SQFEPNS FSGGGFMSSQP+Q YESSSS++ +G+VPVTVKQI E S GEK
Sbjct: 1 MFSSSQFEPNSGFSGGGFMSSQPSQAYESSSSTAKNRDFQGLVPVTVKQITECFQSSGEK 60
Query: 246 SGIVINGIELTNVSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESVQ 425
SG+VINGI LTNVSLVGLVCDKD SKVTEV+FTLDDGTGRIDCKRWV+E+FDAREMESV+
Sbjct: 61 SGLVINGISLTNVSLVGLVCDKDESKVTEVRFTLDDGTGRIDCKRWVSETFDAREMESVR 120
Query: 426 DGTYVRLNGHLKTFQGNQQLLVFSVRPIVDFNEVTFHYIECIHFYSKNSESQLGQQVGDA 605
DGTYVRL+GHLKTFQG QLLVFSVRPI+DFNEVTFHYIECIHFYS+NSESQ QQVGD
Sbjct: 121 DGTYVRLSGHLKTFQGKTQLLVFSVRPIMDFNEVTFHYIECIHFYSQNSESQ-RQQVGDV 179
Query: 606 TQSHTL------NANQATTLNPVIPSQNSDGNGRKNLDDMILDYLKQPACTARQQGIHLD 767
TQS N NQAT LNPV+ SQN+DGNGRKNLDDMILDYLKQPACTARQQGIH+D
Sbjct: 180 TQSVNTTFQGGSNTNQATLLNPVVSSQNNDGNGRKNLDDMILDYLKQPACTARQQGIHID 239
Query: 768 EIAQQLKVPKNKLEGVIQSLEGDGLIYSTIDEYHFKHVEL 887
EIAQQLK+PKNKLEGV+QSLEGDGLIYSTIDEYHFKHVEL
Sbjct: 240 EIAQQLKIPKNKLEGVVQSLEGDGLIYSTIDEYHFKHVEL 279
>gi|225446038|ref|XP_002268721.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 277
Score = 272 bits (694), Expect = 1e-070
Identities = 141/275 (51%), Positives = 193/275 (70%), Gaps = 10/275 (3%)
Frame = +3
Query: 72 MFSNSQFEPNSAFSGGGFMSSQPTQPYES--SSSSSSTTKGIVPVTVKQINESSHSGGEK 245
M+S+SQF+ N+AFSGGGFM SQ TQ E S + + T+ ++P+TVKQI+E+ S +K
Sbjct: 1 MYSHSQFDGNAAFSGGGFMPSQATQAAEPGFSPARNRDTQALLPLTVKQISEAFLSSDDK 60
Query: 246 SGIVINGIELTNVSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESVQ 425
S +I+G+E+ NV+LVG+V +K +VT+V F LDDGTGRIDC RWVNE+ D +EME +
Sbjct: 61 SNFLIDGVEVNNVTLVGMVFNK-AERVTDVGFMLDDGTGRIDCNRWVNEAVDTKEMEGIL 119
Query: 426 DGTYVRLNGHLKTFQGNQQLLVFSVRPIVDFNEVTFHYIECIHFYSKNSESQLGQQVGDA 605
DG YVR++GHLK FQG + L VFS+RP+ DFNE+ H+IECI+ + N++S++ Q G
Sbjct: 120 DGMYVRVHGHLKGFQGKRHLNVFSIRPVTDFNEIASHFIECIYVHIYNTKSRV--QAGGP 177
Query: 606 TQSHTLNANQATTLNPVIPSQNSD-----GNGRKNLDDMILDYLKQPACTARQQGIHLDE 770
TQSH N T L SQ + G G K +D +++DYL+QP AR QG+ DE
Sbjct: 178 TQSHVTNPAIGTPLKGYQASQPNQFSGQYGAGLKGVDQLVIDYLQQPQSLARDQGVGRDE 237
Query: 771 IAQQLKVPKNKLEGVIQSLEGDGLIYSTIDEYHFK 875
+AQQL VP +K+ I+SLE +GLIYSTIDE+H+K
Sbjct: 238 LAQQLNVPVDKIMESIRSLEEEGLIYSTIDEWHYK 272
>gi|225429793|ref|XP_002282796.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 268
Score = 265 bits (676), Expect = 1e-068
Identities = 134/263 (50%), Positives = 185/263 (70%), Gaps = 6/263 (2%)
Frame = +3
Query: 87 QFEPNSAFSGGGFMSSQPTQPYESSSSSSSTTKGIVPVTVKQINESSHSGGEKSGIVING 266
QF+P S GGF SSQ T SS+ S T+G++PVTVKQI+E+SHSG +KS I+G
Sbjct: 7 QFDPFS----GGFSSSQSTDS-GVSSAKSRETQGLIPVTVKQISEASHSGDDKSNFQIDG 61
Query: 267 IELTNVSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESVQDGTYVRL 446
+++TN++LVG+V DK +VT+V F LDDGTGRI+CKRWVNE+FD REME++ DG YVRL
Sbjct: 62 VDVTNITLVGMVFDKS-ERVTDVSFALDDGTGRIECKRWVNEAFDTREMENISDGIYVRL 120
Query: 447 NGHLKTFQGNQQLLVFSVRPIVDFNEVTFHYIECIHFYSKNSESQLGQQVGDATQSHTLN 626
NGHL++ GN+QL+ FSVRP+ +F+E+ FH+IE IH + KNS+++L S ++
Sbjct: 121 NGHLRSSGGNRQLVAFSVRPVTNFDEIAFHFIEVIHLHLKNSKTRLPSDALTQPLSASVK 180
Query: 627 ANQATTLNPVIPSQNSDGNGRKNLDDMILDYLKQPACTARQQGIHLDEIAQQLKVPKNKL 806
P +G K LD M+LDYL+QP+ R++GIH DE++QQLK+ K+
Sbjct: 181 TESTGYQTPSSQLSAQSVDGVKGLDQMVLDYLQQPSNYDREKGIHRDELSQQLKISTEKI 240
Query: 807 EGVIQSLEGDGLIYSTIDEYHFK 875
I++LE +GLIYSTIDE+H+K
Sbjct: 241 MESIRTLEEEGLIYSTIDEFHYK 263
>gi|255634690|gb|ACU17707.1| unknown [Glycine max]
Length = 292
Score = 260 bits (663), Expect = 4e-067
Identities = 133/281 (47%), Positives = 197/281 (70%), Gaps = 11/281 (3%)
Frame = +3
Query: 57 SPIEKMFSNSQFEPNSAFSGGGFMSSQPTQPYESS--SSSSSTTKGIVPVTVKQINESSH 230
S + KMFS SQF+ +AFSGGGF SSQP+ +SS S+S T G+VPVTVKQI+E+S
Sbjct: 13 SRVSKMFSGSQFDTTTAFSGGGFTSSQPSTLNDSSPAPSNSRETPGLVPVTVKQISEASQ 72
Query: 231 SGGEKSGIVINGIELTNVSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDARE 410
SG EKS VING++L NV+LVG++ +K V + T+V F LDDGTGRI C+RW+NE+FD +E
Sbjct: 73 SGDEKSNFVINGVDLNNVTLVGMMFEK-VERNTDVSFVLDDGTGRIKCRRWINEAFDTKE 131
Query: 411 MESVQDGTYVRLNGHLKTFQGNQQLLVFSVRPIVDFNEVTFHYIECIHFYSKNSESQLGQ 590
ME+V + YVR+ GHLK+FQG +QL+ FSVRP+ +F+E+ FH+I+CIH + ++ G
Sbjct: 132 MEAVMNDMYVRVYGHLKSFQGVKQLVAFSVRPVTNFDEIPFHFIDCIHNHLRSKIKVEGI 191
Query: 591 QVGDATQSHTLNA------NQATTLNPVIPSQNSDGNGRKNLDDMILDYLKQPACTARQQ 752
+ + +L N++ NPV ++ D G K +D +++DYL+Q + + +
Sbjct: 192 TSANPSSGSSLETPVKSAPNRSQASNPVCAQRSVD--GLKGIDKLVMDYLEQHSDRSDGR 249
Query: 753 GIHLDEIAQQLKVPKNKLEGVIQSLEGDGLIYSTIDEYHFK 875
GIH+DE++++LK+P K++ +++L DG IYSTID+ H+K
Sbjct: 250 GIHVDELSRELKLPIEKIKLSLKTLADDGEIYSTIDDDHYK 290
>gi|68299229|emb|CAJ13715.1| putative replication factor A [Capsicum chinense]
Length = 299
Score = 247 bits (629), Expect = 3e-063
Identities = 127/277 (45%), Positives = 189/277 (68%), Gaps = 18/277 (6%)
Frame = +3
Query: 81 NSQFEPNSAFSGGGFMSSQPTQPYESSSSSSSTTKG-----IVPVTVKQINESSHSGGEK 245
N+QF+ N+AFSGGGFM SQ TQ +S S S TK ++P+TVKQI+E+ S +K
Sbjct: 24 NNQFDGNAAFSGGGFMPSQATQ--TASDHSFSPTKNRDSQTLIPLTVKQISEAFQSSDDK 81
Query: 246 SGIVINGIELTNVSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESVQ 425
+ +I+G+++ NV LVG++ +K +T V F +DDGTGR+DC RWVNE+ D +EME++
Sbjct: 82 TNFLIDGVDVNNVKLVGILFNK-AEMLTAVSFVVDDGTGRLDCFRWVNEAVDTKEMEALT 140
Query: 426 DGTYVRLNGHLKTFQGNQQLLVFSVRPIVDFNEVTFHYIECIHFYSKNS-------ESQL 584
+G YVR++GHLK FQG +QL+ +SVRP+ D+NE+ H+ E I+ +S NS S +
Sbjct: 141 NGIYVRVHGHLKGFQGKKQLMAYSVRPVDDYNEIASHFAEVIYVHSYNSRLRKQQDSSFM 200
Query: 585 GQQVGDATQSHTLNANQATTLNPVIPSQNSDGNGRKNLDDMILDYLKQPACTARQQGIHL 764
QV ++ + L QA+ N P N DG G + M+LDYL+QP+C A ++G+H
Sbjct: 201 SAQVPSSSFNTPLKGYQASASNQ-FPGFNMDGIG--GVHKMVLDYLQQPSCLALEKGVHR 257
Query: 765 DEIAQQLKVPKNKLEGVIQSLEGDGLIYSTIDEYHFK 875
+E+AQQL+VP K+ G +++LE +GL+YSTID++H+K
Sbjct: 258 NELAQQLRVPSEKIMGAMEALESEGLVYSTIDDFHYK 294
>gi|224121196|ref|XP_002330767.1| predicted protein [Populus trichocarpa]
Length = 282
Score = 245 bits (624), Expect = 1e-062
Identities = 127/273 (46%), Positives = 184/273 (67%), Gaps = 11/273 (4%)
Frame = +3
Query: 75 FSNSQFEPNSAFSGGGFMSSQPTQPYESSSSSSSTTKGIVPVTVKQINESSHSGGEKSGI 254
FS F P+ + S S S SS + G+VPVTVKQI+++S SG EKS
Sbjct: 13 FSGGGFMPSQSTQLTDSTPSPAKASLLSLSLSSRNSLGVVPVTVKQISQASQSGDEKSSF 72
Query: 255 VINGIELTNVSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESVQDGT 434
VING+++TNV++VG+V +K K T+V F +DDGTGRI C+RWV E+FD EME+VQDG
Sbjct: 73 VINGVDVTNVTVVGMVFNK-AEKSTDVSFVIDDGTGRIGCRRWVTENFDKLEMEAVQDGM 131
Query: 435 YVRLNGHLKTFQGNQQLLVFSVRPIVDFNEVTFHYIECIHFYSKNSESQLGQQVGDATQS 614
YVR+ GHL+ FQ +QL+ FSVRP+ +F+E+TFH+I+CIH + +NS+ Q G +TQ
Sbjct: 132 YVRVIGHLRVFQDVKQLVAFSVRPVTNFDEITFHFIDCIHSHLQNSK----LQGGASTQL 187
Query: 615 HTLNANQAT------TLNPVIPSQNSDGNGRKNLDDMILDYLKQPACTARQQGIHLDEIA 776
H + ++ T T + S+ D +G K+ D ++LD L+Q + +++G+H+DE+
Sbjct: 188 HMVESSMNTPVRNGQTFTSNLMSKQFDVDGLKDCDQLVLDRLQQSSSIGQEKGMHMDELC 247
Query: 777 QQLKVPKNKLEGVIQSLEGDGLIYSTIDEYHFK 875
QQLK+P K++ I+SLE +GLIYSTIDE+H+K
Sbjct: 248 QQLKLPMEKIKESIRSLEDEGLIYSTIDEFHYK 280
>gi|31790111|gb|AAP58374.1| RPA 32kDa [Pisum sativum]
Length = 273
Score = 238 bits (606), Expect = 2e-060
Identities = 122/271 (45%), Positives = 186/271 (68%), Gaps = 7/271 (2%)
Frame = +3
Query: 78 SNSQFEPNSAFSGGGFMSSQPTQPYESSSSSSSTTKGIVPVTVKQINESSHSGGEKSGIV 257
S+SQF+ ++AFSGGGF SSQ + + + S ++G+VPVTVKQI+E+S SG EKS
Sbjct: 3 SSSQFDSSNAFSGGGFTSSQLNES-SPAPTKSRDSQGLVPVTVKQISEASQSGDEKSNFA 61
Query: 258 INGIELTNVSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESVQDGTY 437
ING++LTNV+LVG+V +K + T+V F LDDGTGRI C+RWVNE+FD++EME V + Y
Sbjct: 62 INGVDLTNVTLVGMVYEK-TERNTDVNFVLDDGTGRIKCRRWVNETFDSKEMEEVSNDMY 120
Query: 438 VRLNGHLKTFQGNQQLLVFSVRPIVDFNEVTFHYIECIHFYSKNSESQLGQQVGDATQSH 617
VR+ G+LK+FQG +QL FSVRP+ +F+E+ FH+I+CIH + G +
Sbjct: 121 VRVYGNLKSFQGVKQLGAFSVRPVTNFDEIPFHFIDCIHSHLLAKVKLEGTPSTYPPTNS 180
Query: 618 TLNANQATTLN----PVIPSQNS-DGNGRKNLDDMILDYLKQPACTARQQGIHLDEIAQQ 782
++N + LN P P +G ++ D +++DYL+Q + ++GIH++E+A++
Sbjct: 181 SINTPVKSALNGSQAPSNPGYTQYSTDGLEDCDKLVIDYLQQHSSMLDERGIHVEELARE 240
Query: 783 LKVPKNKLEGVIQSLEGDGLIYSTIDEYHFK 875
LK+P +++ +++LE DGL+YSTID+ H+K
Sbjct: 241 LKLPLDRIRLSVKALEDDGLVYSTIDDSHYK 271
>gi|255574103|ref|XP_002527967.1| Replication protein A 30 kDa subunit, putative
[Ricinus communis]
Length = 242
Score = 213 bits (542), Expect = 4e-053
Identities = 105/174 (60%), Positives = 143/174 (82%), Gaps = 6/174 (3%)
Frame = +3
Query: 78 SNSQFEPNSAFSGGGFMSSQPTQPYES--SSSSSSTTKGIVPVTVKQINESSHSGGEKSG 251
S+SQFE +FSGGGFMSSQ +QP +S S + S ++G+VPVTVKQI+++SHSG E S
Sbjct: 3 SSSQFE---SFSGGGFMSSQSSQPTDSAPSPAKSRDSQGLVPVTVKQISQASHSGDENSN 59
Query: 252 IVINGIELTNVSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESVQDG 431
VI+G+++TNV++VG+V DK KVT+V FT+DDGTGRI CKRWVNE+FD+ EME++QDG
Sbjct: 60 YVIDGVDVTNVTVVGMVFDK-AQKVTDVNFTVDDGTGRIGCKRWVNENFDSSEMETIQDG 118
Query: 432 TYVRLNGHLKTFQGNQQLLVFSVRPIVDFNEVTFHYIECIHFYSKNSESQLGQQ 593
YVR++GHL++FQG +QL FSVRP+++F+EVTFH+I+CIH + NS+SQ +Q
Sbjct: 119 MYVRVSGHLRSFQGVRQLGAFSVRPVMNFDEVTFHFIDCIHTHLLNSKSQFTKQ 172
>gi|294460336|gb|ADE75749.1| unknown [Picea sitchensis]
Length = 281
Score = 201 bits (511), Expect = 2e-049
Identities = 119/278 (42%), Positives = 174/278 (62%), Gaps = 20/278 (7%)
Frame = +3
Query: 84 SQFEPNSAFSGGGFMSSQPTQPYESSSSS---SSTTKGIVPVTVKQINESSHS-GGEKSG 251
SQ + S FSGGGFM SQ TQ E SS S T G++P+TVKQI++++ E S
Sbjct: 6 SQSDGGSLFSGGGFMPSQATQVNEGGFSSVRKSGTATGLLPLTVKQISQATQKPSDENSN 65
Query: 252 IVINGIELTNVSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESVQDG 431
I+G+++ NV+LVG+V +K+ +VT+V F LDDGTGR++ KRWVN++ ++ EM VQ+G
Sbjct: 66 FTIDGVDVNNVTLVGMVFNKE-ERVTDVSFYLDDGTGRMEVKRWVNDAMESAEMADVQNG 124
Query: 432 TYVRLNGHLKTFQGNQQLLVFSVRPIVDFNEVTFHYIECIHFYSKNSESQLGQQVGDATQ 611
+YVR++GHL++FQ + + FSVRP+ DFNEVTFH +ECI + N + Q G ATQ
Sbjct: 125 SYVRVHGHLRSFQNKKLVNAFSVRPVTDFNEVTFHSLECIFVHLYNMKVQ-----GGATQ 179
Query: 612 SHTLN--ANQATTLNPVIPSQN---SDG----NGRKNLDDMILDYLKQPACTARQQGIHL 764
++ + A T PS N S G G K+L+ M+ ++PA A + G+H+
Sbjct: 180 PNSASPVAKGPPTPFSNTPSHNQFMSPGPVSVGGAKDLNRMVQSIFEEPANLAIEHGVHV 239
Query: 765 DEIAQQLK-VPKNKLEGVIQSLEGDGLIYSTIDEYHFK 875
D++ ++L K ++ I L +G IYSTIDE H+K
Sbjct: 240 DDVVRRLHGFTKKQIMESIAFLINEGYIYSTIDEDHYK 277
>gi|330318724|gb|AEC11022.1| replication protein a 30 kda subunit [Camellia
sinensis]
Length = 222
Score = 195 bits (493), Expect = 2e-047
Identities = 94/182 (51%), Positives = 133/182 (73%), Gaps = 3/182 (1%)
Frame = +3
Query: 129 SSQPTQPYE--SSSSSSSTTKGIVPVTVKQINESSHSGGEKSGIVINGIELTNVSLVGLV 302
SSQ TQ + SS + S G+VP+TVKQI+ES+HSG EKS V++G+++ NV+L+G+V
Sbjct: 13 SSQSTQATDIGSSPAKSRNAYGVVPITVKQISESAHSGDEKSNYVVDGVDVVNVTLIGMV 72
Query: 303 CDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESVQDGTYVRLNGHLKTFQGNQQ 482
K +VT+V FTLDDGTGRIDC RWVNE+FD++EME++QDG YVR+NG +K+ QG +Q
Sbjct: 73 -SKKTERVTDVAFTLDDGTGRIDCNRWVNEAFDSKEMENIQDGIYVRVNGLIKSLQGRRQ 131
Query: 483 LLVFSVRPIVDFNEVTFHYIECIHFYSKNSESQLGQQVGDATQSHTLNANQATTLNPVIP 662
L+ FSVRP+ +F+E++FH+IECIHF+ +NS+++L QS T + A + I
Sbjct: 132 LIAFSVRPVTNFDEISFHFIECIHFHLQNSKTKLQGNTTTQPQSATPSVKTAARTDQWIS 191
Query: 663 SQ 668
Q
Sbjct: 192 GQ 193
>gi|297832926|ref|XP_002884345.1| hypothetical protein ARALYDRAFT_477538
[Arabidopsis lyrata subsp. lyrata]
Length = 278
Score = 194 bits (491), Expect = 3e-047
Identities = 103/273 (37%), Positives = 168/273 (61%), Gaps = 14/273 (5%)
Frame = +3
Query: 87 QFEPNSAFSGGGFMSSQ-PTQPYESSSS-SSSTTKGIVPVTVKQINESSHSGGEKSGIVI 260
+F+ N+AF+GGGFM SQ TQ ++SSSS + + ++P+T+KQ++ +S +G +S I
Sbjct: 5 EFDGNAAFAGGGFMPSQATTQAHDSSSSLKNRDVRTLLPLTLKQLSSASTTG--ESNFSI 62
Query: 261 NGIELTNVSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESVQDGTYV 440
+G+++ V++VG + + +++T+V+F +DDGTG +DC RW E + EME+V+ G YV
Sbjct: 63 DGVDINTVAIVGRISRME-NRITQVEFVVDDGTGWVDCVRWCQERQETEEMEAVKLGMYV 121
Query: 441 RLNGHLKTFQGNQQLLVFSVRPIVDFNEVTFHYIECIHFYSKNSESQLGQQVGDATQSHT 620
RL+GHLK FQG + + VFS+RP+ DFNE+ H+ EC++ + N++ + G + AT +
Sbjct: 122 RLHGHLKIFQGKRSVNVFSIRPVTDFNEIVHHFTECMYVHMYNTKLR-GGSITQATTTPR 180
Query: 621 LNANQATTLNPVIPSQNSDGNGRKN--------LDDMILDYLKQPACTARQQGIHLDEIA 776
+T P P Q N N + +L+YL QP + G+H D IA
Sbjct: 181 PQMPYSTMPTPAKPYQTGPSNQFPNQFNDPMHGVKQTVLNYLNQPMHLVSEAGVHCDIIA 240
Query: 777 QQLKVPKNKLEGVIQSLEGDGLIYSTIDEYHFK 875
+ L++P +++ ++ L DG IYST+DE FK
Sbjct: 241 RDLRIPLPQVKDALEQLSNDGCIYSTMDETCFK 273
>gi|18396383|ref|NP_566188.1| replication factor A2 [Arabidopsis thaliana]
Length = 278
Score = 188 bits (477), Expect = 1e-045
Identities = 103/272 (37%), Positives = 165/272 (60%), Gaps = 14/272 (5%)
Frame = +3
Query: 90 FEPNSAFSGGGFMSSQ-PTQPYESSSS-SSSTTKGIVPVTVKQINESSHSGGEKSGIVIN 263
F+ N+AF+GGGFM SQ TQ +ESSSS + + ++P+T+KQ++ +S +G +S I+
Sbjct: 6 FDGNAAFAGGGFMPSQATTQAHESSSSLKNRDVRTLLPLTLKQLSSASTTG--ESNFSID 63
Query: 264 GIELTNVSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESVQDGTYVR 443
G+++ V +VG + + +++T+V F +DDGTG +DC RW + + EME+V+ G YVR
Sbjct: 64 GVDIKTVVIVGRISRME-NRITQVDFVVDDGTGWVDCVRWCHARQETEEMEAVKLGMYVR 122
Query: 444 LNGHLKTFQGNQQLLVFSVRPIVDFNEVTFHYIECIHFYSKNSESQLGQQVGDATQSHTL 623
L+GHLK FQG + + VFSVRP+ DFNE+ H+ EC++ + N++ + G + T +
Sbjct: 123 LHGHLKIFQGKRSVNVFSVRPVTDFNEIVHHFTECMYVHMYNTKLR-GGSITQDTATPRP 181
Query: 624 NANQATTLNPVIPSQNSDGNGRKN--------LDDMILDYLKQPACTARQQGIHLDEIAQ 779
+T P P Q N N + +L+YL QP + G+H D IA+
Sbjct: 182 QMPYSTMPTPAKPYQTGPSNQFPNQFNDSMHGVKQTVLNYLNQPMHIVSEAGVHCDIIAR 241
Query: 780 QLKVPKNKLEGVIQSLEGDGLIYSTIDEYHFK 875
+L++P +++ ++ L DG IYST+DE FK
Sbjct: 242 ELRIPLLQVKEALEQLSNDGCIYSTLDETCFK 273
>gi|115450003|ref|NP_001048604.1| Os02g0829100 [Oryza sativa Japonica Group]
Length = 279
Score = 182 bits (461), Expect = 1e-043
Identities = 102/272 (37%), Positives = 158/272 (58%), Gaps = 11/272 (4%)
Frame = +3
Query: 90 FEPNSAFSGGGFMSSQPTQPYESSSSSSSTTKGIVPVTVKQINESSHSG--GEKSG-IVI 260
F AFS F SSQ ++ S S +P+TVKQI+E+ SG GEK V+
Sbjct: 4 FSQPDAFSPSQFTSSQNAAADSTTPSKSRGASSTMPLTVKQISEAQQSGITGEKGAPFVV 63
Query: 261 NGIELTNVSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESVQDGTYV 440
+G+E NV LVGLV K + T+V FT+DDGTGR+D RWVN+ D+ E +VQ+G YV
Sbjct: 64 DGVETANVRLVGLVSGK-TERNTDVSFTIDDGTGRLDFIRWVNDGADSAETAAVQNGMYV 122
Query: 441 RLNGHLKTFQGNQQLLVFSVRPIVDFNEVTFHYIECIHFYSKNSESQLGQQVGDATQSHT 620
+ G LK Q ++ F++RP+ D+NEVT H+I+C+ + +N++SQ+G + +
Sbjct: 123 SVIGSLKGLQERKRATAFAIRPVTDYNEVTLHFIQCVRMHLENTKSQIGSPAKTYSAMGS 182
Query: 621 LNAN---QATTLNPV----IPSQNSDGNGRKNLDDMILDYLKQPACTARQQGIHLDEIAQ 779
++N + TT V P + + +L+ +L+ ++PA + G+H+DEI +
Sbjct: 183 SSSNGFSEMTTPTSVKSNPAPVLSVTNGSKTDLNTEVLNVFREPANVESEHGVHIDEIVK 242
Query: 780 QLKVPKNKLEGVIQSLEGDGLIYSTIDEYHFK 875
+ ++P+ K++ I L G IYSTIDE H+K
Sbjct: 243 RFRLPEAKIKVAIDYLADIGHIYSTIDESHYK 274
>gi|222623970|gb|EEE58102.1| hypothetical protein OsJ_08977 [Oryza sativa
Japonica Group]
Length = 278
Score = 182 bits (461), Expect = 1e-043
Identities = 102/272 (37%), Positives = 158/272 (58%), Gaps = 11/272 (4%)
Frame = +3
Query: 90 FEPNSAFSGGGFMSSQPTQPYESSSSSSSTTKGIVPVTVKQINESSHSG--GEKSG-IVI 260
F AFS F SSQ ++ S S +P+TVKQI+E+ SG GEK V+
Sbjct: 3 FSQPDAFSPSQFTSSQNAAADSTTPSKSRGASSTMPLTVKQISEAQQSGITGEKGAPFVV 62
Query: 261 NGIELTNVSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESVQDGTYV 440
+G+E NV LVGLV K + T+V FT+DDGTGR+D RWVN+ D+ E +VQ+G YV
Sbjct: 63 DGVETANVRLVGLVSGK-TERNTDVSFTIDDGTGRLDFIRWVNDGADSAETAAVQNGMYV 121
Query: 441 RLNGHLKTFQGNQQLLVFSVRPIVDFNEVTFHYIECIHFYSKNSESQLGQQVGDATQSHT 620
+ G LK Q ++ F++RP+ D+NEVT H+I+C+ + +N++SQ+G + +
Sbjct: 122 SVIGSLKGLQERKRATAFAIRPVTDYNEVTLHFIQCVRMHLENTKSQIGSPAKTYSAMGS 181
Query: 621 LNAN---QATTLNPV----IPSQNSDGNGRKNLDDMILDYLKQPACTARQQGIHLDEIAQ 779
++N + TT V P + + +L+ +L+ ++PA + G+H+DEI +
Sbjct: 182 SSSNGFSEMTTPTSVKSNPAPVLSVTNGSKTDLNTEVLNVFREPANVESEHGVHIDEIVK 241
Query: 780 QLKVPKNKLEGVIQSLEGDGLIYSTIDEYHFK 875
+ ++P+ K++ I L G IYSTIDE H+K
Sbjct: 242 RFRLPEAKIKVAIDYLADIGHIYSTIDESHYK 273
>gi|218191867|gb|EEC74294.1| hypothetical protein OsI_09546 [Oryza sativa Indica
Group]
Length = 279
Score = 182 bits (460), Expect = 1e-043
Identities = 102/273 (37%), Positives = 159/273 (58%), Gaps = 13/273 (4%)
Frame = +3
Query: 90 FEPNSAFSGGGFMSSQPTQPYESSSSSSSTTKGIVPVTVKQINESSHSG--GEKSG-IVI 260
F AFS F SSQ ++ S S +P+TVKQI+E+ SG GEK V+
Sbjct: 4 FSQPDAFSPSQFTSSQNAAADSTTPSKSRGASSTMPLTVKQISEAQQSGTTGEKGAPFVV 63
Query: 261 NGIELTNVSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESVQDGTYV 440
+G+E NV LVGLV K + T+V FT+DDGTGR+D RWVN+ D+ E +VQ+G YV
Sbjct: 64 DGVETANVRLVGLVSGK-TERNTDVSFTIDDGTGRLDFIRWVNDGADSAETAAVQNGMYV 122
Query: 441 RLNGHLKTFQGNQQLLVFSVRPIVDFNEVTFHYIECIHFYSKNSESQLG------QQVGD 602
+ G LK Q ++ F++RP+ D+NEVT H+I+C+ + +N++SQ+G +G
Sbjct: 123 SVIGSLKGLQERKRATAFAIRPVTDYNEVTLHFIQCVRMHLENTKSQIGGPAKTYSAMGS 182
Query: 603 ATQSHTLNANQATTL--NPVIPSQNSDGNGRKNLDDMILDYLKQPACTARQQGIHLDEIA 776
++ + T++ NP P + + +L+ +L+ ++PA + G+H+DEI
Sbjct: 183 SSSNGFSEMTTPTSVKSNPA-PVLSVTNGSKTDLNTEVLNVFREPANVESEHGVHIDEIV 241
Query: 777 QQLKVPKNKLEGVIQSLEGDGLIYSTIDEYHFK 875
++ ++P+ K++ I L G IYSTIDE H+K
Sbjct: 242 KRFRLPEAKIKVAIDYLADIGHIYSTIDESHYK 274
>gi|194693140|gb|ACF80654.1| unknown [Zea mays]
Length = 273
Score = 174 bits (440), Expect = 3e-041
Identities = 94/264 (35%), Positives = 152/264 (57%), Gaps = 9/264 (3%)
Frame = +3
Query: 108 FSGGGFMSSQPTQPYESSSSSSSTTKGIVPVTVKQINESSHSG-GEKSG-IVINGIELTN 281
FS F SSQ ++ S +P+TVKQ+ ++ SG GEK ++NG+E+ N
Sbjct: 9 FSPSQFTSSQNAAADSTTPSKMRGASSTMPLTVKQVVDAQQSGTGEKGAPFIVNGVEMAN 68
Query: 282 VSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESVQDGTYVRLNGHLK 461
+ LVG+V K V + T+V FTLDDGTGR+D RWVN++ D+ E ++Q+G Y+ + G LK
Sbjct: 69 IRLVGMVNAK-VERTTDVTFTLDDGTGRLDFIRWVNDASDSFETAAIQNGMYIAVIGSLK 127
Query: 462 TFQGNQQLLVFSVRPIVDFNEVTFHYIECIHFYSKNSESQLGQQVG-----DATQSHTLN 626
Q ++ FS+RPI DFNEVT H+I+C+ + +N+E + G + S+ +
Sbjct: 128 GLQERKRATAFSIRPITDFNEVTLHFIQCVRMHIENTELKAGSPARINSSMGVSFSNGFS 187
Query: 627 ANQATTLNPVIPSQNSDGNGRKNLDDMILDYLKQPACTARQQGIHLDEIAQQLK-VPKNK 803
+ T P+ + G+ +L +L++ +PA + G+H+DE+ ++ K +PK +
Sbjct: 188 ESSTPTSLKSSPAPVTSGSSDTDLHTQVLNFFNEPANLESEHGVHVDEVLKRFKLLPKKQ 247
Query: 804 LEGVIQSLEGDGLIYSTIDEYHFK 875
+ I G +YSTIDE+H+K
Sbjct: 248 ITDAIDYNMDSGRLYSTIDEFHYK 271
>gi|326520341|dbj|BAK07429.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 277
Score = 173 bits (437), Expect = 6e-041
Identities = 98/267 (36%), Positives = 157/267 (58%), Gaps = 13/267 (4%)
Frame = +3
Query: 105 AFSGGGFMSSQPTQPYESSSSSSSTTKGIVPVTVKQINESSHSG-GEKSG-IVINGIELT 278
AFS F +SQ +S+ + G +P+TVKQI ++ +G GEK G V++G+E
Sbjct: 9 AFSPSQFTASQ-NAAADSTPNKFRGASGTMPLTVKQIADAQLAGTGEKGGPFVVDGVETA 67
Query: 279 NVSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESVQDGTYVRLNGHL 458
NV LVG+V K V + T+V FTLDDGTGRID RWVN++ D+ E ++Q+G YV + G L
Sbjct: 68 NVRLVGMVSGK-VERNTDVSFTLDDGTGRIDFIRWVNDAADSAETAAIQNGMYVAVIGSL 126
Query: 459 KTFQGNQQLLVFSVRPIVDFNEVTFHYIECIHFYSKNSESQLGQQVGDATQSHTLNANQ- 635
K Q ++ F+VRPI D+NEVT H+I+C+ +++N++S++G + T +N+
Sbjct: 127 KGVQDKKRATAFAVRPITDYNEVTLHFIQCVRMHAENTKSKVGSPTHTNSSMGTPFSNRL 186
Query: 636 -------ATTLNPVIPSQNSDGNGRKNLDDMILDYLKQPACTARQQGIHLDEIAQQLKVP 794
+ NP P+ + + +L+ ++PA G+H+D+IA++ ++P
Sbjct: 187 NEAATPPSVKSNPA-PAASGTNGSETDFYTQVLNVFREPANMESDHGVHMDDIAKRFRLP 245
Query: 795 KNKLEGVIQSLEGDGLIYSTIDEYHFK 875
K++ I G IYSTID++H+K
Sbjct: 246 ALKIKEAIDYHVDVGHIYSTIDDFHYK 272
>gi|242067082|ref|XP_002454830.1| hypothetical protein SORBIDRAFT_04g038190
[Sorghum bicolor]
Length = 278
Score = 172 bits (435), Expect = 1e-040
Identities = 98/267 (36%), Positives = 155/267 (58%), Gaps = 13/267 (4%)
Frame = +3
Query: 108 FSGGGFMSSQPTQPYESSSSSSSTTKGIVPVTVKQINESSHSG-GEKSG-IVINGIELTN 281
FS F +SQ ++ S +P+TVKQ+ ++ SG GEK V++G+E+ N
Sbjct: 9 FSPSQFTASQNAAADSTTPSKMRGASSTMPLTVKQVVDAQQSGTGEKGAPFVVDGVEMAN 68
Query: 282 VSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESVQDGTYVRLNGHLK 461
+ LVG+V K V + T+V FTLDDGTGR+D RWVN++ D+ E +VQ+G YV + G LK
Sbjct: 69 IRLVGMVNGK-VERTTDVTFTLDDGTGRLDFIRWVNDASDSSETAAVQNGMYVAVIGSLK 127
Query: 462 TFQGNQQLLVFSVRPIVDFNEVTFHYIECIHFYSKNSESQLG------QQVGDATQSHTL 623
Q ++ FS+RPI DFNEVT H+I+C+ + +N++ + G +G + +
Sbjct: 128 GLQERKRATAFSIRPITDFNEVTLHFIQCVRMHIENTKLKAGSPARTSSSMGVSVSNGFS 187
Query: 624 NANQATTL--NPVIPSQNSDGNGRKNLDDMILDYLKQPACTARQQGIHLDEIAQQLK-VP 794
++ T+L NP P +L+ +L + +PA + G+H+DE+ +Q K +P
Sbjct: 188 ESSTPTSLKSNPA-PLTGGGSGSDTDLNKQVLHFFSEPANLESEHGVHVDEVYKQFKQLP 246
Query: 795 KNKLEGVIQSLEGDGLIYSTIDEYHFK 875
K+K++ I G +YSTID++HFK
Sbjct: 247 KDKIKEAIAFHVDAGHLYSTIDDFHFK 273
>gi|334185046|ref|NP_001189796.1| replication factor A2 [Arabidopsis thaliana]
Length = 298
Score = 164 bits (414), Expect = 3e-038
Identities = 87/247 (35%), Positives = 145/247 (58%), Gaps = 12/247 (4%)
Frame = +3
Query: 159 SSSSSSTTKGIVPVTVKQINESSHSGGEKSGIVINGIELTNVSLVGLVCDKDVSKVTEVK 338
SS + + ++P+T+KQ++ +S +G +S I+G+++ V +VG + + +++T+V
Sbjct: 51 SSIRNRDVRTLLPLTLKQLSSASTTG--ESNFSIDGVDIKTVVIVGRISRME-NRITQVD 107
Query: 339 FTLDDGTGRIDCKRWVNESFDAREMESVQDGTYVRLNGHLKTFQGNQQLLVFSVRPIVDF 518
F +DDGTG +DC RW + + EME+V+ G YVRL+GHLK FQG + + VFSVRP+ DF
Sbjct: 108 FVVDDGTGWVDCVRWCHARQETEEMEAVKLGMYVRLHGHLKIFQGKRSVNVFSVRPVTDF 167
Query: 519 NEVTFHYIECIHFYSKNSESQLGQQVGDATQSHTLNANQATTLNPVIPSQNSDGNGRKN- 695
NE+ H+ EC++ + N++ + G + T + +T P P Q N N
Sbjct: 168 NEIVHHFTECMYVHMYNTKLR-GGSITQDTATPRPQMPYSTMPTPAKPYQTGPSNQFPNQ 226
Query: 696 -------LDDMILDYLKQPACTARQQGIHLDEIAQQLKVPKNKLEGVIQSLEGDGLIYST 854
+ +L+YL QP + G+H D IA++L++P +++ ++ L DG IYST
Sbjct: 227 FNDSMHGVKQTVLNYLNQPMHIVSEAGVHCDIIARELRIPLLQVKEALEQLSNDGCIYST 286
Query: 855 IDEYHFK 875
+DE FK
Sbjct: 287 LDETCFK 293
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,399,880,566,028
Number of Sequences: 15229318
Number of Extensions: 1399880566028
Number of Successful Extensions: 384417364
Number of sequences better than 0.0: 0
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