BLASTX 7.6.2
Query= UN11548 /QuerySize=1244
(1243 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G55680.1 | Symbols: | WD-40 repeat family pro... 639 1e-183
TAIR9_protein||AT3G13340.1 | Symbols: | WD-40 repeat family pro... 621 4e-178
TAIR9_protein||AT5G56190.1 | Symbols: | WD-40 repeat family pro... 511 4e-145
TAIR9_protein||AT5G56190.2 | Symbols: | WD-40 repeat family pro... 511 4e-145
TAIR9_protein||AT1G78070.1 | Symbols: | FUNCTIONS IN: molecular... 360 1e-099
TAIR9_protein||AT1G36070.1 | Symbols: | WD-40 repeat family pro... 339 2e-093
>TAIR9_protein||AT1G55680.1 | Symbols: | WD-40 repeat family protein |
chr1:20804988-20807294 REVERSE
Length = 446
Score = 639 bits (1647), Expect = 1e-183
Identities = 322/398 (80%), Positives = 343/398 (86%), Gaps = 13/398 (3%)
Frame = +1
Query: 70 MSNIQPEDPAPYMNHVGDQMQEAHDGLDDGFHGD---AWDSDVDEFDYSNNKIGDTSAAQ 240
MSN Q +D A YM V D+M E D LD+ F GD A DSDVDEFDYSNNKI DTSA Q
Sbjct: 1 MSNYQGDD-AEYMEDVDDEMDE--DDLDEDFRGDDMAASDSDVDEFDYSNNKIADTSADQ 57
Query: 241 ARKGKDIQGIPWGRLIITRDQYRQTRFEQYRNYENVPTSGDSSKKDCMVTQKGALFYDFW 420
ARKGKDIQGIPW RL ITR+ YRQTR EQY+NYENVP SG+SS KDCM TQKGALFYDFW
Sbjct: 58 ARKGKDIQGIPWDRLSITRETYRQTRLEQYKNYENVPNSGESSGKDCMATQKGALFYDFW 117
Query: 421 RNSRSIKSSIIHFQLRNLVWATSKHDVYLMSNFLVNHYSTLTSRKHEVLNVQGHVSPSEK 600
RN+RSIKSSI+HFQLRNLVWATSKHDVYLMS +LV+HYSTLTS KH+VLNVQGHVSPSEK
Sbjct: 118 RNTRSIKSSILHFQLRNLVWATSKHDVYLMSQYLVSHYSTLTSGKHDVLNVQGHVSPSEK 177
Query: 601 HPGSLLEGFTKTQVSTLAVKDKFLVAGGFQGEIICKHLDRPGVSFCWRTTYDDNAITNAI 780
HPGSLLEGFTKTQVSTLAV+DKFLVAGGFQGE+ICKHLDRPGVSFC RTTYDDNAITNAI
Sbjct: 178 HPGSLLEGFTKTQVSTLAVRDKFLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAI 237
Query: 781 EIYNKPSGALHFTASNNDCGLRDFDMERYQLVNYIRFPWPVNHTSLSPDGKLLTIVGDNP 960
EIYNKPSGALHFTASNNDCG+RDFDMERYQLVN RFPWPVNHTSLSPDGKLLTIVGDNP
Sbjct: 238 EIYNKPSGALHFTASNNDCGVRDFDMERYQLVNQFRFPWPVNHTSLSPDGKLLTIVGDNP 297
Query: 961 EGLLVDPNTGKTLGTVAGHLDFSFASAWHPDGVTFSTGNQDKTCRVWDVRNLSKSVAVLR 1140
E LLVDPNTGKTL T++GHLDFSFASAWHPDG TFSTGNQDKTCRVWD+RNLSKSVAVLR
Sbjct: 298 ESLLVDPNTGKTLATLSGHLDFSFASAWHPDGFTFSTGNQDKTCRVWDIRNLSKSVAVLR 357
Query: 1141 VTL--VQSV--PSATHLMGSTWPWLSS*LCHVYDVSNG 1242
L ++S+ S M P + HVYDVSNG
Sbjct: 358 GNLGAIRSIRYTSDGKYMAMAEP---ADFVHVYDVSNG 392
>TAIR9_protein||AT3G13340.1 | Symbols: | WD-40 repeat family protein |
chr3:4332370-4334603 FORWARD
Length = 448
Score = 621 bits (1600), Expect = 4e-178
Identities = 306/398 (76%), Positives = 341/398 (85%), Gaps = 11/398 (2%)
Frame = +1
Query: 70 MSNIQPEDPAPYMNHVGDQMQEAHDGLDDGFHGD---AWDSDVDEFDYSNNKIGDTSAAQ 240
MSN + +D A YM V D+M++ D +D+ F GD A DSDV+EFDYSNNK+ DT+A Q
Sbjct: 1 MSNYRGDD-AEYMEDVDDEMEDVEDDMDEEFRGDDLGASDSDVEEFDYSNNKVADTTAEQ 59
Query: 241 ARKGKDIQGIPWGRLIITRDQYRQTRFEQYRNYENVPTSGDSSKKDCMVTQKGALFYDFW 420
ARKGKDIQGIPW RL I+R++YRQTR EQY+NYENVP SG+SS+K C VTQKG LFYDFW
Sbjct: 60 ARKGKDIQGIPWDRLNISREKYRQTRLEQYKNYENVPNSGESSEKVCKVTQKGGLFYDFW 119
Query: 421 RNSRSIKSSIIHFQLRNLVWATSKHDVYLMSNFLVNHYSTLTSRKHEVLNVQGHVSPSEK 600
RNSRSIKS+I+HFQLRNLVWATSKHDVYLMSNFLV HYS+LTS KHEVLNV+GHV+PSEK
Sbjct: 120 RNSRSIKSTILHFQLRNLVWATSKHDVYLMSNFLVTHYSSLTSGKHEVLNVRGHVAPSEK 179
Query: 601 HPGSLLEGFTKTQVSTLAVKDKFLVAGGFQGEIICKHLDRPGVSFCWRTTYDDNAITNAI 780
HPGSLLEGFT+TQVSTLAVKD FLVAGGFQGE+ICKHLDRPGVSFC R TYDDNAITNAI
Sbjct: 180 HPGSLLEGFTQTQVSTLAVKDDFLVAGGFQGELICKHLDRPGVSFCSRMTYDDNAITNAI 239
Query: 781 EIYNKPSGALHFTASNNDCGLRDFDMERYQLVNYIRFPWPVNHTSLSPDGKLLTIVGDNP 960
EIYNKPSGALHFTASNNDCG+RDFDMERYQLV + RFPWPVNH SLSPDGKLL IVGDNP
Sbjct: 240 EIYNKPSGALHFTASNNDCGVRDFDMERYQLVKHFRFPWPVNHASLSPDGKLLAIVGDNP 299
Query: 961 EGLLVDPNTGKTLGTVAGHLDFSFASAWHPDGVTFSTGNQDKTCRVWDVRNLSKSVAVLR 1140
EGL+VDPNTGKTL T++GHLDFSFASAWHPDGVTFSTGNQDKTCRVWD+RNLS+SV VL+
Sbjct: 300 EGLIVDPNTGKTLETLSGHLDFSFASAWHPDGVTFSTGNQDKTCRVWDIRNLSQSVTVLK 359
Query: 1141 VTL--VQSV--PSATHLMGSTWPWLSS*LCHVYDVSNG 1242
L ++S+ S M P + HVYDVSNG
Sbjct: 360 GNLGAIRSIRYTSDGKYMAMAEP---ADFVHVYDVSNG 394
>TAIR9_protein||AT5G56190.1 | Symbols: | WD-40 repeat family protein |
chr5:22742563-22744909 FORWARD
Length = 442
Score = 511 bits (1315), Expect = 4e-145
Identities = 249/383 (65%), Positives = 306/383 (79%), Gaps = 12/383 (3%)
Frame = +1
Query: 106 MNHVGDQMQEAHDGLDDGFHGDAWDSDVDEFDYSNNKIGDTSAAQARKGKDIQGIPWGRL 285
M+ + D M A DG D DA DS+V++FD NK DTSAAQAR GKDIQGIPW L
Sbjct: 14 MDDLEDDMNAAFDGRDI----DASDSEVEDFD-QLNKAADTSAAQARNGKDIQGIPWDSL 68
Query: 286 IITRDQYRQTRFEQYRNYENVPTSGDSSKKDCMVTQKGALFYDFWRNSRSIKSSIIHFQL 465
+TR YR+TR EQY+NYEN+P SGD S K CM T+KG+ FY+F RNSRS++S+I+HFQL
Sbjct: 69 TLTRKDYRKTRLEQYKNYENIPNSGDESAKKCMNTEKGSSFYEFRRNSRSVRSTILHFQL 128
Query: 466 RNLVWATSKHDVYLMSNFLVNHYSTLTSRKHEVLNVQGHVSPSEKHPGSLLEGFTKTQVS 645
RNLVWATSKHDVYL+SN+ ++H+S+LT + E+LNV+GHV+PSEKHP SLLEGFT+TQVS
Sbjct: 129 RNLVWATSKHDVYLLSNYSISHWSSLTGCRSEILNVKGHVAPSEKHPESLLEGFTETQVS 188
Query: 646 TLAVKDKFLVAGGFQGEIICKHLDRPGVSFCWRTTYDDNAITNAIEIYNKPSGALHFTAS 825
TLAVK++ LVAGGFQGE+ICKHLDRPGVSFC RTTY +NAITNA++IY SGALHF AS
Sbjct: 189 TLAVKERLLVAGGFQGELICKHLDRPGVSFCSRTTYTENAITNAVDIYRNSSGALHFMAS 248
Query: 826 NNDCGLRDFDMERYQLVNYIRFPWPVNHTSLSPDGKLLTIVGDNPEGLLVDPNTGKTLGT 1005
NNDCG+RDFDMERY+LV R+ WPVNH+SLSPDGKL+ +VGD+P+GLLVD + G+T+GT
Sbjct: 249 NNDCGVRDFDMERYKLVQLFRYLWPVNHSSLSPDGKLVAVVGDDPDGLLVDTSNGQTIGT 308
Query: 1006 VAGHLDFSFASAWHPDGVTFSTGNQDKTCRVWDVRNLSKSVAVLRVTL--VQSV--PSAT 1173
+ GHLD+SFASAWHP+GVTF+TGNQDKTCR+WD R LS+SVAVL+ L V+S+ S
Sbjct: 309 LKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIRFTSDG 368
Query: 1174 HLMGSTWPWLSS*LCHVYDVSNG 1242
+ P + H+YD +G
Sbjct: 369 RYVAMAEP---ADFVHIYDTKSG 388
>TAIR9_protein||AT5G56190.2 | Symbols: | WD-40 repeat family protein |
chr5:22742654-22744909 FORWARD
Length = 448
Score = 511 bits (1315), Expect = 4e-145
Identities = 249/383 (65%), Positives = 306/383 (79%), Gaps = 12/383 (3%)
Frame = +1
Query: 106 MNHVGDQMQEAHDGLDDGFHGDAWDSDVDEFDYSNNKIGDTSAAQARKGKDIQGIPWGRL 285
M+ + D M A DG D DA DS+V++FD NK DTSAAQAR GKDIQGIPW L
Sbjct: 20 MDDLEDDMNAAFDGRDI----DASDSEVEDFD-QLNKAADTSAAQARNGKDIQGIPWDSL 74
Query: 286 IITRDQYRQTRFEQYRNYENVPTSGDSSKKDCMVTQKGALFYDFWRNSRSIKSSIIHFQL 465
+TR YR+TR EQY+NYEN+P SGD S K CM T+KG+ FY+F RNSRS++S+I+HFQL
Sbjct: 75 TLTRKDYRKTRLEQYKNYENIPNSGDESAKKCMNTEKGSSFYEFRRNSRSVRSTILHFQL 134
Query: 466 RNLVWATSKHDVYLMSNFLVNHYSTLTSRKHEVLNVQGHVSPSEKHPGSLLEGFTKTQVS 645
RNLVWATSKHDVYL+SN+ ++H+S+LT + E+LNV+GHV+PSEKHP SLLEGFT+TQVS
Sbjct: 135 RNLVWATSKHDVYLLSNYSISHWSSLTGCRSEILNVKGHVAPSEKHPESLLEGFTETQVS 194
Query: 646 TLAVKDKFLVAGGFQGEIICKHLDRPGVSFCWRTTYDDNAITNAIEIYNKPSGALHFTAS 825
TLAVK++ LVAGGFQGE+ICKHLDRPGVSFC RTTY +NAITNA++IY SGALHF AS
Sbjct: 195 TLAVKERLLVAGGFQGELICKHLDRPGVSFCSRTTYTENAITNAVDIYRNSSGALHFMAS 254
Query: 826 NNDCGLRDFDMERYQLVNYIRFPWPVNHTSLSPDGKLLTIVGDNPEGLLVDPNTGKTLGT 1005
NNDCG+RDFDMERY+LV R+ WPVNH+SLSPDGKL+ +VGD+P+GLLVD + G+T+GT
Sbjct: 255 NNDCGVRDFDMERYKLVQLFRYLWPVNHSSLSPDGKLVAVVGDDPDGLLVDTSNGQTIGT 314
Query: 1006 VAGHLDFSFASAWHPDGVTFSTGNQDKTCRVWDVRNLSKSVAVLRVTL--VQSV--PSAT 1173
+ GHLD+SFASAWHP+GVTF+TGNQDKTCR+WD R LS+SVAVL+ L V+S+ S
Sbjct: 315 LKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIRFTSDG 374
Query: 1174 HLMGSTWPWLSS*LCHVYDVSNG 1242
+ P + H+YD +G
Sbjct: 375 RYVAMAEP---ADFVHIYDTKSG 394
>TAIR9_protein||AT1G78070.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING
ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like
(InterPro:IPR011046), WD40 repeat, region (InterPro:IPR017986),
WD40/YVTN repeat-like (InterPro:IPR015943), WD40 repeat
(InterPro:IPR001680); BEST Arabidopsis thaliana protein match is: WD-40
repeat family protein (TAIR:AT1G36070.1); Has 110 Blast hits to 110
proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
28; Plants - 80; Viruses - 0; Other Eukaryotes - 2 (source: NCBI
BLink). | chr1:29355219-29358368 FORWARD
Length = 450
Score = 360 bits (923), Expect = 1e-099
Identities = 174/325 (53%), Positives = 232/325 (71%), Gaps = 2/325 (0%)
Frame = +1
Query: 169 DAWDSDVDEFDYSNNKI-GDTSAAQARKGKDIQGIPWGRLIITRDQYRQTRFEQYRNYEN 345
D DSD D F+ S +K +TSA +AR GKDIQGIPW L TRD+YR+ R Y+N+E+
Sbjct: 38 DFMDSDFD-FELSESKTNNETSALEARNGKDIQGIPWESLNYTRDRYRENRLLHYKNFES 96
Query: 346 VPTSGDSSKKDCMVTQKGALFYDFWRNSRSIKSSIIHFQLRNLVWATSKHDVYLMSNFLV 525
+ S + K+C+ +KG FYDF N+R +KS+I HFQLRNLVWATSKHDVY M+N+ +
Sbjct: 97 LFRSREELDKECLQVEKGKNFYDFQFNTRLVKSTIAHFQLRNLVWATSKHDVYFMNNYSL 156
Query: 526 NHYSTLTSRKHEVLNVQGHVSPSEKHPGSLLEGFTKTQVSTLAVKDKFLVAGGFQGEIIC 705
H+S+L R EVLNV + PS K GSL + ++ Q+ST+AVKD +VAGGFQGE+IC
Sbjct: 157 MHWSSLLQRGKEVLNVAKPIVPSMKQHGSLSQSVSRVQISTMAVKDDLIVAGGFQGELIC 216
Query: 706 KHLDRPGVSFCWRTTYDDNAITNAIEIYNKPSGALHFTASNNDCGLRDFDMERYQLVNYI 885
K ++ P V+FC + T DN ITN+++IYN PSG+L +NNDC +R FD + L+N
Sbjct: 217 KKINEPEVAFCTKLTSADNDITNSVDIYNAPSGSLRVMTANNDCTVRLFDATNFALLNRF 276
Query: 886 RFPWPVNHTSLSPDGKLLTIVGDNPEGLLVDPNTGKTLGTVAGHLDFSFASAWHPDGVTF 1065
F W VN+ S SPDGKL+ ++GD+PE LL D +GK + + GHLD+SF+SAWHP+G
Sbjct: 277 AFHWSVNNISTSPDGKLVAVLGDSPECLLADTGSGKVIHGLEGHLDYSFSSAWHPNGQIL 336
Query: 1066 STGNQDKTCRVWDVRNLSKSVAVLR 1140
+TGNQD TCR+WDVRNLS+S+ VL+
Sbjct: 337 ATGNQDTTCRLWDVRNLSQSLKVLK 361
>TAIR9_protein||AT1G36070.1 | Symbols: | WD-40 repeat family protein |
chr1:13467164-13470386 REVERSE
Length = 419
Score = 339 bits (869), Expect = 2e-093
Identities = 162/324 (50%), Positives = 228/324 (70%), Gaps = 3/324 (0%)
Frame = +1
Query: 178 DSDVDEFDYSNNKIGDTSAAQARKGKDIQGIPWGRLIITRDQYRQTRFEQYRNYENV--P 351
DSD ++ + DTSA +AR GKDIQGI W RD++R+TR +QY N+ N+ P
Sbjct: 7 DSDFEDDCETKKMETDTSAQEARNGKDIQGIQWEGFKYNRDEFRETRLKQYDNFVNILRP 66
Query: 352 TSGDS-SKKDCMVTQKGALFYDFWRNSRSIKSSIIHFQLRNLVWATSKHDVYLMSNFLVN 528
+S + K+ V +KG FYDF N+R + S+I+HFQLRNLVWATSKHDVYLM N+ +
Sbjct: 67 SSREKLDKEHGQVVEKGKNFYDFQFNTRLVTSTIVHFQLRNLVWATSKHDVYLMQNYSLM 126
Query: 529 HYSTLTSRKHEVLNVQGHVSPSEKHPGSLLEGFTKTQVSTLAVKDKFLVAGGFQGEIICK 708
H+S+L R EVLNV V+P++K PG E ++ QVS++AVK+ ++ GGF GE++CK
Sbjct: 127 HWSSLLQRGKEVLNVARSVTPTQKLPGLFSEPLSRVQVSSMAVKENLILLGGFDGELLCK 186
Query: 709 HLDRPGVSFCWRTTYDDNAITNAIEIYNKPSGALHFTASNNDCGLRDFDMERYQLVNYIR 888
+++PGV+FC R + +DNAITN ++IY PSG+L +NNDC +R FD + + V+
Sbjct: 187 CVNQPGVAFCTRLSTEDNAITNTVDIYRDPSGSLRLITANNDCKIRVFDAQSFTRVSEFA 246
Query: 889 FPWPVNHTSLSPDGKLLTIVGDNPEGLLVDPNTGKTLGTVAGHLDFSFASAWHPDGVTFS 1068
W VN+TS+SPDGKLL +VGD+ E L+ D ++GK + ++ GH D+SFASAWHP+G+ +
Sbjct: 247 LDWSVNNTSVSPDGKLLAVVGDSTECLISDSHSGKVISSLRGHKDYSFASAWHPNGLILA 306
Query: 1069 TGNQDKTCRVWDVRNLSKSVAVLR 1140
TGNQD CR+WD+RN S+S AVL+
Sbjct: 307 TGNQDTACRLWDIRNPSESFAVLK 330
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,233,609,797
Number of Sequences: 33410
Number of Extensions: 6233609797
Number of Successful Extensions: 221643266
Number of sequences better than 0.0: 0
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