BLASTX 7.6.2
Query= UN11566 /QuerySize=911
(910 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|30680456|ref|NP_850539.1| RNA recognition motif-containing pr... 268 1e-069
gi|6648193|gb|AAF21191.1|AC013483_15 putative RNA-binding protei... 268 1e-069
gi|18398061|ref|NP_566321.1| RNA recognition motif-containing pr... 268 1e-069
gi|15292697|gb|AAK92717.1| putative RNA-binding protein [Arabido... 268 1e-069
gi|297829340|ref|XP_002882552.1| hypothetical protein ARALYDRAFT... 264 1e-068
gi|220914601|ref|YP_002489910.1| hypothetical protein Achl_3868 ... 79 1e-012
gi|116179660|ref|XP_001219679.1| hypothetical protein CHGG_00458... 70 4e-010
gi|50552384|ref|XP_503602.1| YALI0E05819p [Yarrowia lipolytica] 70 4e-010
gi|304407846|ref|ZP_07389497.1| YD repeat protein [Paenibacillus... 69 9e-010
gi|329755383|gb|AEC03970.1| nacrein A1 [Pinctada margaritifera] 68 2e-009
gi|74826594|sp|Q9NL38.1|MA66_PINMA RecName: Full=N66 matrix prot... 66 6e-009
gi|71994947|ref|NP_001024844.1| GRounDhog (hedgehog-like family)... 63 6e-008
gi|66821213|ref|XP_644110.1| hypothetical protein DDB_G0274899 [... 61 2e-007
gi|330792130|ref|XP_003284143.1| hypothetical protein DICPUDRAFT... 60 4e-007
>gi|30680456|ref|NP_850539.1| RNA recognition motif-containing protein
[Arabidopsis thaliana]
Length = 495
Score = 268 bits (684), Expect = 1e-069
Identities = 147/187 (78%), Positives = 149/187 (79%), Gaps = 27/187 (14%)
Frame = +3
Query: 3 YEGGNGVGGGGGNSSFFSSVTSNLWGNNGGLNYNNNNNNNNNATNSNLNSNTYMVGGGGS 182
YEGGN GGGNSSFFSSVT NLWGNNGGLNYNNNN N+ NSNTYM GGS
Sbjct: 299 YEGGN----GGGNSSFFSSVTRNLWGNNGGLNYNNNNTNS--------NSNTYM---GGS 343
Query: 183 TSGNNTLSGPFG----NWGAPGGGGNNAVVGSNENVKFGYGGNGESGFGLGAGGYAARNI 350
+SGNNTLSGPFG NWGAP GGGNNAV SNENVKFGYGGNGESGFGLG GGYAARN
Sbjct: 344 SSGNNTLSGPFGNSGVNWGAP-GGGNNAV--SNENVKFGYGGNGESGFGLGTGGYAARN- 399
Query: 351 GPPSKAAAAPSSSSFSSASAANNNIGYDGAGLAEFYGNGAVYSDPTWRSPTPETEGPASF 530
P AAP SSSFSSASA NN GYD AGLAEFYGNGAVYSDPTWRSPTPETEGPA F
Sbjct: 400 --PGANKAAP-SSSFSSASATNNT-GYDTAGLAEFYGNGAVYSDPTWRSPTPETEGPAPF 455
Query: 531 SYGIGGG 551
SYGIGGG
Sbjct: 456 SYGIGGG 462
Score = 66 bits (159), Expect = 8e-009
Identities = 31/34 (91%), Positives = 32/34 (94%)
Frame = +2
Query: 554 GGPSSDVSGRSSSPGYVGSYSVDKRQPNRGEPSR 655
G PSSDVS RSSSPGYVGSYSV+KRQPNRGEPSR
Sbjct: 462 GVPSSDVSARSSSPGYVGSYSVNKRQPNRGEPSR 495
>gi|6648193|gb|AAF21191.1|AC013483_15 putative RNA-binding protein [Arabidopsis
thaliana]
Length = 492
Score = 268 bits (684), Expect = 1e-069
Identities = 147/187 (78%), Positives = 149/187 (79%), Gaps = 27/187 (14%)
Frame = +3
Query: 3 YEGGNGVGGGGGNSSFFSSVTSNLWGNNGGLNYNNNNNNNNNATNSNLNSNTYMVGGGGS 182
YEGGN GGGNSSFFSSVT NLWGNNGGLNYNNNN N+ NSNTYM GGS
Sbjct: 299 YEGGN----GGGNSSFFSSVTRNLWGNNGGLNYNNNNTNS--------NSNTYM---GGS 343
Query: 183 TSGNNTLSGPFG----NWGAPGGGGNNAVVGSNENVKFGYGGNGESGFGLGAGGYAARNI 350
+SGNNTLSGPFG NWGAP GGGNNAV SNENVKFGYGGNGESGFGLG GGYAARN
Sbjct: 344 SSGNNTLSGPFGNSGVNWGAP-GGGNNAV--SNENVKFGYGGNGESGFGLGTGGYAARN- 399
Query: 351 GPPSKAAAAPSSSSFSSASAANNNIGYDGAGLAEFYGNGAVYSDPTWRSPTPETEGPASF 530
P AAP SSSFSSASA NN GYD AGLAEFYGNGAVYSDPTWRSPTPETEGPA F
Sbjct: 400 --PGANKAAP-SSSFSSASATNNT-GYDTAGLAEFYGNGAVYSDPTWRSPTPETEGPAPF 455
Query: 531 SYGIGGG 551
SYGIGGG
Sbjct: 456 SYGIGGG 462
>gi|18398061|ref|NP_566321.1| RNA recognition motif-containing protein
[Arabidopsis thaliana]
Length = 494
Score = 268 bits (684), Expect = 1e-069
Identities = 147/187 (78%), Positives = 149/187 (79%), Gaps = 27/187 (14%)
Frame = +3
Query: 3 YEGGNGVGGGGGNSSFFSSVTSNLWGNNGGLNYNNNNNNNNNATNSNLNSNTYMVGGGGS 182
YEGGN GGGNSSFFSSVT NLWGNNGGLNYNNNN N+ NSNTYM GGS
Sbjct: 299 YEGGN----GGGNSSFFSSVTRNLWGNNGGLNYNNNNTNS--------NSNTYM---GGS 343
Query: 183 TSGNNTLSGPFG----NWGAPGGGGNNAVVGSNENVKFGYGGNGESGFGLGAGGYAARNI 350
+SGNNTLSGPFG NWGAP GGGNNAV SNENVKFGYGGNGESGFGLG GGYAARN
Sbjct: 344 SSGNNTLSGPFGNSGVNWGAP-GGGNNAV--SNENVKFGYGGNGESGFGLGTGGYAARN- 399
Query: 351 GPPSKAAAAPSSSSFSSASAANNNIGYDGAGLAEFYGNGAVYSDPTWRSPTPETEGPASF 530
P AAP SSSFSSASA NN GYD AGLAEFYGNGAVYSDPTWRSPTPETEGPA F
Sbjct: 400 --PGANKAAP-SSSFSSASATNNT-GYDTAGLAEFYGNGAVYSDPTWRSPTPETEGPAPF 455
Query: 531 SYGIGGG 551
SYGIGGG
Sbjct: 456 SYGIGGG 462
>gi|15292697|gb|AAK92717.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 494
Score = 268 bits (684), Expect = 1e-069
Identities = 147/187 (78%), Positives = 149/187 (79%), Gaps = 27/187 (14%)
Frame = +3
Query: 3 YEGGNGVGGGGGNSSFFSSVTSNLWGNNGGLNYNNNNNNNNNATNSNLNSNTYMVGGGGS 182
YEGGN GGGNSSFFSSVT NLWGNNGGLNYNNNN N+ NSNTYM GGS
Sbjct: 299 YEGGN----GGGNSSFFSSVTRNLWGNNGGLNYNNNNTNS--------NSNTYM---GGS 343
Query: 183 TSGNNTLSGPFG----NWGAPGGGGNNAVVGSNENVKFGYGGNGESGFGLGAGGYAARNI 350
+SGNNTLSGPFG NWGAP GGGNNAV SNENVKFGYGGNGESGFGLG GGYAARN
Sbjct: 344 SSGNNTLSGPFGNSGVNWGAP-GGGNNAV--SNENVKFGYGGNGESGFGLGTGGYAARN- 399
Query: 351 GPPSKAAAAPSSSSFSSASAANNNIGYDGAGLAEFYGNGAVYSDPTWRSPTPETEGPASF 530
P AAP SSSFSSASA NN GYD AGLAEFYGNGAVYSDPTWRSPTPETEGPA F
Sbjct: 400 --PGANKAAP-SSSFSSASATNNT-GYDTAGLAEFYGNGAVYSDPTWRSPTPETEGPAPF 455
Query: 531 SYGIGGG 551
SYGIGGG
Sbjct: 456 SYGIGGG 462
>gi|297829340|ref|XP_002882552.1| hypothetical protein ARALYDRAFT_478119
[Arabidopsis lyrata subsp. lyrata]
Length = 495
Score = 264 bits (674), Expect = 1e-068
Identities = 146/187 (78%), Positives = 148/187 (79%), Gaps = 27/187 (14%)
Frame = +3
Query: 3 YEGGNGVGGGGGNSSFFSSVTSNLWGNNGGLNYNNNNNNNNNATNSNLNSNTYMVGGGGS 182
YEGGN GGGNSSFFSSVT NLWGNNGGLNYNNN N+ NSNTYM GGS
Sbjct: 299 YEGGN----GGGNSSFFSSVTRNLWGNNGGLNYNNNTTNS--------NSNTYM---GGS 343
Query: 183 TSGNNTLSGPFG----NWGAPGGGGNNAVVGSNENVKFGYGGNGESGFGLGAGGYAARNI 350
+S NNTLSGPFG NWGAP GGGNNAV SNENVKFGYGGNGESGFGLG GGYAARN
Sbjct: 344 SSVNNTLSGPFGNSGVNWGAP-GGGNNAV--SNENVKFGYGGNGESGFGLGTGGYAARN- 399
Query: 351 GPPSKAAAAPSSSSFSSASAANNNIGYDGAGLAEFYGNGAVYSDPTWRSPTPETEGPASF 530
P AAP SSSFSSASA NN GYD AGLAEFYGNGAVYSDPTWRSPTPETEGPASF
Sbjct: 400 --PGANKAAP-SSSFSSASATNNT-GYDTAGLAEFYGNGAVYSDPTWRSPTPETEGPASF 455
Query: 531 SYGIGGG 551
SYGIGGG
Sbjct: 456 SYGIGGG 462
Score = 69 bits (168), Expect = 7e-010
Identities = 32/34 (94%), Positives = 33/34 (97%)
Frame = +2
Query: 554 GGPSSDVSGRSSSPGYVGSYSVDKRQPNRGEPSR 655
GGPSSDVS RSSSPGYVGSYSV+KRQPNRGEPSR
Sbjct: 462 GGPSSDVSARSSSPGYVGSYSVNKRQPNRGEPSR 495
>gi|220914601|ref|YP_002489910.1| hypothetical protein Achl_3868 [Arthrobacter
chlorophenolicus A6]
Length = 322
Score = 79 bits (192), Expect = 1e-012
Identities = 58/178 (32%), Positives = 67/178 (37%), Gaps = 9/178 (5%)
Frame = +3
Query: 12 GNGVGGG---GGNSSFFSSVTSNLWGNNGGLNYNNNNNNNNNATNSNLNSNTYMVGGGGS 182
GNG G G GGN + + + N GNNGG N N NN N N N N G G+
Sbjct: 64 GNGGGNGNNAGGNGNGYGNGNGNAGGNNGGGNGNGNNGGGNGNAGGNGNGNNAGGNGNGN 123
Query: 183 TSGNNTLSGPFGNWGAPGGGGNNAVVGSNENVKFGYG-----GNGESGFGLGAGGYAARN 347
GN G GN G G GG++ G N N G G GNG G G G GG N
Sbjct: 124 GGGNGNNGGGNGNGGGNGNGGDHGNGGGNGNNGGGNGNGGGHGNG-GGNGNGGGGGGGNN 182
Query: 348 IGPPSKAAAAPSSSSFSSASAANNNIGYDGAGLAEFYGNGAVYSDPTWRSPTPETEGP 521
G + + N G D G G G T ET+ P
Sbjct: 183 GGGGDTGGGGNTGGGGDTGGGGNTGGGGDTGGGGNTGGGGDTGGGGNTGGGTGETQTP 240
>gi|116179660|ref|XP_001219679.1| hypothetical protein CHGG_00458 [Chaetomium
globosum CBS 148.51]
Length = 560
Score = 70 bits (170), Expect = 4e-010
Identities = 50/155 (32%), Positives = 61/155 (39%), Gaps = 4/155 (2%)
Frame = +3
Query: 9 GGNGVGGGGGNSSFFSSVTSNLWG--NNGGLNYNNNNNNNNNATNSNLNSNTYMVGGGGS 182
GGN GGG N + N G N GG N NN NN +N GG
Sbjct: 278 GGNNNNGGGNNGGGNNGGGGNNGGGNNGGGNNGGGNNGGGNNGGGNNGGGGNNGGGGNNG 337
Query: 183 TSGNNTLSGPFGNWGAPGGGGNNAVVGSNENVKFGYGGNGESGFGLGAGGYAARNIGPPS 362
GNN G G G GGGGNN G N G G G + G G G N G +
Sbjct: 338 GGGNNGGGGNNGGGGNNGGGGNNG--GGGNNGGGGNNGGGGNNGGGGNNGGGGNNGGGGN 395
Query: 363 KAAAAPSSSSFSSASAANNNIGYDGAGLAEFYGNG 467
++++ ++ ANN G + G A G G
Sbjct: 396 NGGGGNNNNNNNNGGGANNGGGANNGGGANNGGGG 430
>gi|50552384|ref|XP_503602.1| YALI0E05819p [Yarrowia lipolytica]
Length = 1391
Score = 70 bits (170), Expect = 4e-010
Identities = 58/183 (31%), Positives = 74/183 (40%), Gaps = 12/183 (6%)
Frame = +3
Query: 9 GGNGVGGGGGNSSFFSSVTSNLWGNNGGLNYNNNNNNNNNATNSNLNSNTYMVGGGGSTS 188
G NG GG N S N GNNGG N NN N + +N +N GGS
Sbjct: 1088 GDNGGNNGGNNGGNGGSDGGNNGGNNGGSNGGNNGGNGGSDGGNNGGNN------GGSNG 1141
Query: 189 GNNTLSGPFGNWGAPGGGGNNAVVGSNENVKFGYGGNGESGFGLGAGGYAARNIGPPSKA 368
GN G GN G GG N GS + G G SG G G+G + G S +
Sbjct: 1142 GNGGSDG--GNNGGNNGGSNGGNGGSAGDNGSGSGSGSGSGSGSGSGSGSGSGSGSGSGS 1199
Query: 369 AAAPSSSSFSSASAANNNIGYDGAGLAEFYGNGAVYSDPTWRSPTPETEGPASFSYGIGG 548
+ S S S S + + G+G G+G+ S+ + +EG S G G
Sbjct: 1200 EGSGSGSGSGSGSGSEGSGSGSGSGSGSGSGSGS-GSEGSGSGSGSGSEGSGS---GSGS 1255
Query: 549 GEE 557
G E
Sbjct: 1256 GSE 1258
>gi|304407846|ref|ZP_07389497.1| YD repeat protein [Paenibacillus
curdlanolyticus YK9]
Length = 2837
Score = 69 bits (167), Expect = 9e-010
Identities = 46/134 (34%), Positives = 56/134 (41%), Gaps = 4/134 (2%)
Frame = +3
Query: 78 GNNGGLNYNNNNNNNN----NATNSNLNSNTYMVGGGGSTSGNNTLSGPFGNWGAPGGGG 245
GNNG N NN NN NN N N N N N G G SGNN G G
Sbjct: 1959 GNNGNGNGNNGNNGNNGNHGNGNNGNGNGNNGNNGNGNGNSGNNGNGNGNGGNNGNGNSK 2018
Query: 246 NNAVVGSNENVKFGYGGNGESGFGLGAGGYAARNIGPPSKAAAAPSSSSFSSASAANNNI 425
+N GS+ + G G +G G G G N S A PS+ S +A+ +N
Sbjct: 2019 DNGSSGSDSSGNSGNGNGNGNGNGNGGGNGKGNNKVASSSIVAGPSNYSLGAATPLSNGK 2078
Query: 426 GYDGAGLAEFYGNG 467
G AG + G+G
Sbjct: 2079 GSSTAGGKDNNGDG 2092
>gi|329755383|gb|AEC03970.1| nacrein A1 [Pinctada margaritifera]
Length = 611
Score = 68 bits (164), Expect = 2e-009
Identities = 42/109 (38%), Positives = 51/109 (46%), Gaps = 4/109 (3%)
Frame = +3
Query: 9 GGNGVGGGGGNSSFFSSVTSN-LWGNNGGLNYNNNNNNNNNATNSNLNSNTYMVGGGGST 185
G NG GNS + + N GNNGG + N NN N+NN N N N+ G
Sbjct: 335 GNNGGNSNNGNSGYGNGNNGNGNNGNNGGNDNNGNNGNSNNGNNGNGNNGNNGGNGNNGN 394
Query: 186 SGNNTLSGPFGNWGAPGGGGNNAVVGSNENVKFGYGGNGESGFGLGAGG 332
SG + GN G GG GNN G+N N G GNG++G GG
Sbjct: 395 SGYGNGNNGNGNNGNNGGNGNN---GNNGNGNNGNNGNGDNGSNGNNGG 440
>gi|74826594|sp|Q9NL38.1|MA66_PINMA RecName: Full=N66 matrix protein; Flags:
Precursor
Length = 568
Score = 66 bits (160), Expect = 6e-009
Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Frame = +3
Query: 9 GGNGVGGGGGNSSFFSSVTSNLWGNNGGLNYNNNNNNNNNATNSNLNSNTYMVGGGGSTS 188
GGNG G GN + ++ N GNNGG N NN N+NN N N N+ G +
Sbjct: 321 GGNGNNGNNGNGNNGNNGNGNN-GNNGGNGNNGNNGNSNNGNNGNGNNGNNGGNGNNGNN 379
Query: 189 GN-NTLSGPFGNWGAPGGGGNNAVVGSNENVKFGYGG-NGES 308
GN N + G+ G GG GNN G N N GY G NG S
Sbjct: 380 GNGNNENNGNGSNGNNGGNGNNGNNGDNGNGDNGYNGDNGNS 421
>gi|71994947|ref|NP_001024844.1| GRounDhog (hedgehog-like family) family member
(grd-1) [Caenorhabditis elegans]
Length = 1160
Score = 63 bits (151), Expect = 6e-008
Identities = 43/134 (32%), Positives = 57/134 (42%), Gaps = 6/134 (4%)
Frame = +3
Query: 9 GGNGVGGGGGNSSFFSSVTSNLWGNNGGLNYNNNNNNNNNATNSNLNSNTYMVGGGGSTS 188
GGNG GGGG S S G+N N N N N G GG+ +
Sbjct: 792 GGNGGSGGGGGGGGGGSGGSGGGGSNSNSGGGGGNGGGGNGGGGNGNGGGAGDGNGGAGA 851
Query: 189 GNNTLSGPFGNWGAPGGGGNNAVVGSNENVKFGYGGNGESGFGLGAGGYAARNIGPPSKA 368
GN +G GA G GN A G+ G G +G G GAG +A ++A
Sbjct: 852 GNGNGAGAGNGNGAGAGNGNGAGAGN------GNGAGAGNGNGAGAGDASAAAAAAQAQA 905
Query: 369 AAAPSSSSFSSASA 410
AAA + + ++A+A
Sbjct: 906 AAAAQAQAAAAAAA 919
>gi|66821213|ref|XP_644110.1| hypothetical protein DDB_G0274899 [Dictyostelium
discoideum AX4]
Length = 1308
Score = 61 bits (147), Expect = 2e-007
Identities = 30/85 (35%), Positives = 43/85 (50%)
Frame = +3
Query: 54 SSVTSNLWGNNGGLNYNNNNNNNNNATNSNLNSNTYMVGGGGSTSGNNTLSGPFGNWGAP 233
++V +++ NN N NNNNNNNNN N+N N+N + + NN ++ G P
Sbjct: 57 NNVNNSVNSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNINNDNSAVGTP 116
Query: 234 GGGGNNAVVGSNENVKFGYGGNGES 308
G NNA S+ N G +G S
Sbjct: 117 SGSSNNAHTSSSSNSNGSSGSSGSS 141
>gi|330792130|ref|XP_003284143.1| hypothetical protein DICPUDRAFT_75104
[Dictyostelium purpureum]
Length = 1589
Score = 60 bits (144), Expect = 4e-007
Identities = 34/98 (34%), Positives = 46/98 (46%)
Frame = +3
Query: 15 NGVGGGGGNSSFFSSVTSNLWGNNGGLNYNNNNNNNNNATNSNLNSNTYMVGGGGSTSGN 194
NG NS+ S+ SN N+ N NNNNNNNNN +NS++NSN+ S S +
Sbjct: 915 NGNDNSNSNSNSSSNNNSNSNSNSNNNNNNNNNNNNNNNSNSSINSNSNSNSNSNSNSNS 974
Query: 195 NTLSGPFGNWGAPGGGGNNAVVGSNENVKFGYGGNGES 308
N+ S N + +N+ SN N N S
Sbjct: 975 NSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNSNS 1012
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,399,880,566,028
Number of Sequences: 15229318
Number of Extensions: 1399880566028
Number of Successful Extensions: 384417364
Number of sequences better than 0.0: 0
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