BLASTX 7.6.2
Query= UN11748 /QuerySize=1225
(1224 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G41270.1 | Symbols: | FUNCTIONS IN: molecular... 319 4e-087
>TAIR9_protein||AT5G41270.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: male gametophyte; EXPRESSED
DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: RNAse P,
Rpr2/Rpp21 subunit (InterPro:IPR007175); Has 45 Blast hits to 45
proteins in 15 species: Archae - 0; Bacteria - 21; Metazoa - 8; Fungi -
0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr5:16507797-16508813 FORWARD
Length = 259
Score = 319 bits (815), Expect = 4e-087
Identities = 180/275 (65%), Positives = 210/275 (76%), Gaps = 26/275 (9%)
Frame = -3
Query: 856 MGKRGGANKLTKAQ--GGPNLKSVLRHEHLKNLALWSTGGDSPIPSLATFFGRRLAADGQ 683
MGKR G KLT Q GGPNLKSVLRHEHLKNLALWS+ GD+PIPSLA+ GRRLAAD +
Sbjct: 1 MGKR-GPKKLTNTQGGGGPNLKSVLRHEHLKNLALWSSTGDTPIPSLASLLGRRLAADTE 59
Query: 682 ASDIPHDPDLFSCQRCETVLQPGFNCNVRIDKVSANKKKHMRRRYKKKPNMFPPQNNVVY 503
++ I DPDL SCQRCET+L+PGFNCNVRI+KVSAN KK R R KK N+ PQNNVVY
Sbjct: 60 STGITTDPDLVSCQRCETILKPGFNCNVRIEKVSANVKK-KRNRCKKSNNICFPQNNVVY 118
Query: 502 YCNLCSHRNLKRGTTKGQMKDMYPPKPKTTR-PRPKIDKDVTMVVAPQEIQ--LPSSPER 332
+CN CSHRNLKRGT KGQMK++YP KPKT R RPKI K++TM PQEIQ + SSPER
Sbjct: 119 HCNFCSHRNLKRGTAKGQMKELYPFKPKTARSSRPKIKKEMTM---PQEIQSNMLSSPER 175
Query: 331 RVEN---VSVVENTPKP-MLTLEREKRIRRSKSKKPVDPESVPEKKATVGGGGGGGGSNK 164
V++ V +TPKP MLTLER++RIR+ KSKKP +P+SVPEK GGSNK
Sbjct: 176 SVKDQVEEKSVGDTPKPMMLTLERDRRIRKPKSKKPSEPQSVPEKTV--------GGSNK 227
Query: 163 RKRKA-WTSMKELSETTTTNQSSSSVNFKIPFVL* 62
RKRK+ WTSMKE++E TN+SS + NFKIPF+L*
Sbjct: 228 RKRKSPWTSMKEIAE---TNKSSKAGNFKIPFLL* 259
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,366,841,336
Number of Sequences: 33410
Number of Extensions: 6366841336
Number of Successful Extensions: 227048581
Number of sequences better than 0.0: 0
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