BLASTX 7.6.2
Query= UN11815 /QuerySize=1414
(1413 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9SXQ6|FEN1A_ORYSJ Flap endonuclease 1a OS=Oryza sativa subsp... 367 2e-100
sp|Q75LI2|FEN1B_ORYSJ Flap endonuclease 1b OS=Oryza sativa subsp... 302 5e-081
sp|P39748|FEN1_HUMAN Flap endonuclease 1 OS=Homo sapiens GN=FEN1... 268 8e-071
sp|Q58DH8|FEN1_BOVIN Flap endonuclease 1 OS=Bos taurus GN=FEN1 P... 267 2e-070
sp|P70054|FEN1B_XENLA Flap endonuclease 1-B OS=Xenopus laevis GN... 263 2e-069
sp|P70040|FEN1A_XENLA Flap endonuclease 1-A OS=Xenopus laevis GN... 260 2e-068
sp|P39749|FEN1_MOUSE Flap endonuclease 1 OS=Mus musculus GN=Fen1... 254 1e-066
sp|P39750|RAD2_SCHPO DNA repair protein rad2 OS=Schizosaccharomy... 239 4e-062
sp|O50123|FEN_PYRHO Flap structure-specific endonuclease OS=Pyro... 179 7e-044
sp|O93634|FEN_PYRFU Flap structure-specific endonuclease OS=Pyro... 177 2e-043
sp|B6YWX4|FEN_THEON Flap structure-specific endonuclease OS=Ther... 176 6e-043
sp|Q5JGN0|FEN_PYRKO Flap structure-specific endonuclease OS=Pyro... 175 1e-042
sp|Q9V0P9|FEN_PYRAB Flap structure-specific endonuclease OS=Pyro... 173 4e-042
sp|Q8ZYN2|FEN_PYRAE Flap structure-specific endonuclease OS=Pyro... 173 5e-042
sp|A4WNC4|FEN_PYRAR Flap structure-specific endonuclease OS=Pyro... 170 3e-041
sp|C5A639|FEN_THEGJ Flap structure-specific endonuclease OS=Ther... 170 3e-041
sp|A3MY15|FEN_PYRCJ Flap structure-specific endonuclease OS=Pyro... 169 7e-041
sp|C6A1U9|FEN_THESM Flap structure-specific endonuclease OS=Ther... 168 1e-040
sp|A1RSC7|FEN_PYRIL Flap structure-specific endonuclease OS=Pyro... 167 3e-040
sp|B1YC46|FEN_THENV Flap structure-specific endonuclease OS=Ther... 163 3e-039
>sp|Q9SXQ6|FEN1A_ORYSJ Flap endonuclease 1a OS=Oryza sativa subsp. japonica
GN=FEN-1a PE=2 SV=1
Length = 380
Score = 367 bits (940), Expect = 2e-100
Identities = 183/215 (85%), Positives = 200/215 (93%)
Frame = +2
Query: 110 MGIKGLTKLLADNAPNAMKEQKFESYFGRKIAVDASMSIYQFLIVVGRTGTEMLTNEAGE 289
MGIKGLTKLLADNAP AMKEQKFESYFGR+IAVDASMSIYQFLIVVGRTG E LTNEAGE
Sbjct: 1 MGIKGLTKLLADNAPKAMKEQKFESYFGRRIAVDASMSIYQFLIVVGRTGMETLTNEAGE 60
Query: 290 VTSHLQGMFNRTIRLLEAGIKPVYVFDGKPPELKRQELAKRYSKRADATADLTGAIEAGN 469
VTSHLQGMFNRTIRLLEAGIKPVYVFDGKPP+LK+QELAKRYSKR DAT +LT A+E G+
Sbjct: 61 VTSHLQGMFNRTIRLLEAGIKPVYVFDGKPPDLKKQELAKRYSKREDATKELTEAVEEGD 120
Query: 470 KEDIEKYSKRTVKVTKQHNDDCKRLLKLMGVPVVEATSEAEAQCAALCKA*KVYGVASED 649
K+ IEK+SKRTVKVTKQHN++CKRLL+LMGVPVVEA EAEA+CAALC VY VASED
Sbjct: 121 KDAIEKFSKRTVKVTKQHNEECKRLLRLMGVPVVEAPCEAEAECAALCINDMVYAVASED 180
Query: 650 MDSLTFGAPKFLRHLMDPSSRKIPVMEFDIAKILE 754
MDSLTFGAP+FLRHLMDPSS+KIPVMEF++AK+LE
Sbjct: 181 MDSLTFGAPRFLRHLMDPSSKKIPVMEFEVAKVLE 215
>sp|Q75LI2|FEN1B_ORYSJ Flap endonuclease 1b OS=Oryza sativa subsp. japonica
GN=FEN-1b PE=2 SV=1
Length = 412
Score = 302 bits (772), Expect = 5e-081
Identities = 148/215 (68%), Positives = 183/215 (85%)
Frame = +2
Query: 110 MGIKGLTKLLADNAPNAMKEQKFESYFGRKIAVDASMSIYQFLIVVGRTGTEMLTNEAGE 289
MGIKGLTKLLA++AP A ++ E Y GR +A+D S+SIYQFLIVVGR GTE+LTNEAGE
Sbjct: 1 MGIKGLTKLLAEHAPGAAVRRRVEDYRGRVVAIDTSLSIYQFLIVVGRKGTEVLTNEAGE 60
Query: 290 VTSHLQGMFNRTIRLLEAGIKPVYVFDGKPPELKRQELAKRYSKRADATADLTGAIEAGN 469
VTSHLQGM NRT+R+LEAGIKPV+VFDG+PP++K++ELAKR KR ++ DL AIE G+
Sbjct: 61 VTSHLQGMLNRTVRILEAGIKPVFVFDGEPPDMKKKELAKRSLKRDGSSEDLNRAIEVGD 120
Query: 470 KEDIEKYSKRTVKVTKQHNDDCKRLLKLMGVPVVEATSEAEAQCAALCKA*KVYGVASED 649
++ IEK+SKRTVKVTK+HN+DCKRLL LMGVPVV+A EAEAQCAALC+ KV+ +ASED
Sbjct: 121 EDLIEKFSKRTVKVTKKHNEDCKRLLSLMGVPVVQAPGEAEAQCAALCENHKVFAIASED 180
Query: 650 MDSLTFGAPKFLRHLMDPSSRKIPVMEFDIAKILE 754
MDSLTFGA +FLRHL D S ++ PV EF+++K+LE
Sbjct: 181 MDSLTFGARRFLRHLTDLSFKRSPVTEFEVSKVLE 215
>sp|P39748|FEN1_HUMAN Flap endonuclease 1 OS=Homo sapiens GN=FEN1 PE=1 SV=1
Length = 380
Score = 268 bits (684), Expect = 8e-071
Identities = 132/214 (61%), Positives = 168/214 (78%), Gaps = 1/214 (0%)
Frame = +2
Query: 113 GIKGLTKLLADNAPNAMKEQKFESYFGRKIAVDASMSIYQFLIVVGRTGTEMLTNEAGEV 292
GI+GL KL+AD AP+A++E +SYFGRK+A+DASMSIYQFLI V R G ++L NE GE
Sbjct: 2 GIQGLAKLIADVAPSAIRENDIKSYFGRKVAIDASMSIYQFLIAV-RQGGDVLQNEEGET 60
Query: 293 TSHLQGMFNRTIRLLEAGIKPVYVFDGKPPELKRQELAKRYSKRADATADLTGAIEAGNK 472
TSHL GMF RTIR++E GIKPVYVFDGKPP+LK ELAKR +RA+A L A AG +
Sbjct: 61 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQAAGAE 120
Query: 473 EDIEKYSKRTVKVTKQHNDDCKRLLKLMGVPVVEATSEAEAQCAALCKA*KVYGVASEDM 652
+++EK++KR VKVTKQHND+CK LL LMG+P ++A SEAEA CAAL KA KVY A+EDM
Sbjct: 121 QEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDM 180
Query: 653 DSLTFGAPKFLRHLMDPSSRKIPVMEFDIAKILE 754
D LTFG+P +RHL ++K+P+ EF +++IL+
Sbjct: 181 DCLTFGSPVLMRHLTASEAKKLPIQEFHLSRILQ 214
>sp|Q58DH8|FEN1_BOVIN Flap endonuclease 1 OS=Bos taurus GN=FEN1 PE=2 SV=1
Length = 380
Score = 267 bits (681), Expect = 2e-070
Identities = 132/214 (61%), Positives = 167/214 (78%), Gaps = 1/214 (0%)
Frame = +2
Query: 113 GIKGLTKLLADNAPNAMKEQKFESYFGRKIAVDASMSIYQFLIVVGRTGTEMLTNEAGEV 292
GI+GL KL+AD AP+A++E +SYFGRK+A+DASMSIYQFLI V R G ++L NE GE
Sbjct: 2 GIQGLAKLIADVAPSAIRENDIKSYFGRKVAIDASMSIYQFLIAV-RQGGDVLQNEEGET 60
Query: 293 TSHLQGMFNRTIRLLEAGIKPVYVFDGKPPELKRQELAKRYSKRADATADLTGAIEAGNK 472
TSHL GMF RTIR++E GIKPVYVFDGKPP+LK ELAKR +RA+A L A AG +
Sbjct: 61 TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQEAQAAGAE 120
Query: 473 EDIEKYSKRTVKVTKQHNDDCKRLLKLMGVPVVEATSEAEAQCAALCKA*KVYGVASEDM 652
++EK++KR VKVTKQHND+CK LL LMG+P ++A SEAEA CAAL KA KVY A+EDM
Sbjct: 121 AEVEKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDM 180
Query: 653 DSLTFGAPKFLRHLMDPSSRKIPVMEFDIAKILE 754
D LTFG+P +RHL ++K+P+ EF +++IL+
Sbjct: 181 DCLTFGSPVLMRHLTASEAKKLPIQEFHLSRILQ 214
>sp|P70054|FEN1B_XENLA Flap endonuclease 1-B OS=Xenopus laevis GN=fen1-b PE=1
SV=1
Length = 382
Score = 263 bits (672), Expect = 2e-069
Identities = 134/214 (62%), Positives = 162/214 (75%), Gaps = 1/214 (0%)
Frame = +2
Query: 113 GIKGLTKLLADNAPNAMKEQKFESYFGRKIAVDASMSIYQFLIVVGRTGTEMLTNEAGEV 292
GI GL KL+AD AP A+KE +SYFGRK+AVDASM IYQFLI V + G ML NE GE
Sbjct: 2 GIHGLAKLIADVAPAAIKEHDIKSYFGRKVAVDASMCIYQFLIAVRQDG-NMLQNEEGET 60
Query: 293 TSHLQGMFNRTIRLLEAGIKPVYVFDGKPPELKRQELAKRYSKRADATADLTGAIEAGNK 472
TSHL GMF RTIR+LE GIKPVYVFDGKPP++K ELAKR +RA+A L A EAG
Sbjct: 61 TSHLMGMFYRTIRMLEHGIKPVYVFDGKPPQMKSGELAKRSERRAEAEKLLEAAEEAGEV 120
Query: 473 EDIEKYSKRTVKVTKQHNDDCKRLLKLMGVPVVEATSEAEAQCAALCKA*KVYGVASEDM 652
E+IEK++KR VKVTKQHN++CK+LL LMG+P V+A EAEA CAAL KA KVY A+EDM
Sbjct: 121 ENIEKFNKRLVKVTKQHNEECKKLLSLMGIPYVDAPCEAEATCAALVKAGKVYAAATEDM 180
Query: 653 DSLTFGAPKFLRHLMDPSSRKIPVMEFDIAKILE 754
D+LTFG P LRHL ++K+P+ EF + ++ +
Sbjct: 181 DALTFGTPVLLRHLTASEAKKLPIQEFHLNRVFQ 214
>sp|P70040|FEN1A_XENLA Flap endonuclease 1-A OS=Xenopus laevis GN=fen1-a PE=1
SV=1
Length = 382
Score = 260 bits (664), Expect = 2e-068
Identities = 132/214 (61%), Positives = 162/214 (75%), Gaps = 1/214 (0%)
Frame = +2
Query: 113 GIKGLTKLLADNAPNAMKEQKFESYFGRKIAVDASMSIYQFLIVVGRTGTEMLTNEAGEV 292
GI GL KL+AD AP A+KE +SYFGRK+AVDASM IYQFLI V + G L NE GE
Sbjct: 2 GIHGLAKLIADVAPAAIKEHDIKSYFGRKVAVDASMCIYQFLIAVRQDG-NTLQNEEGET 60
Query: 293 TSHLQGMFNRTIRLLEAGIKPVYVFDGKPPELKRQELAKRYSKRADATADLTGAIEAGNK 472
TSHL GMF RTIR++E GIKPVYVFDGKPP++K ELAKR +RA+A L A EAG
Sbjct: 61 TSHLMGMFYRTIRMVEHGIKPVYVFDGKPPQMKSGELAKRSERRAEAEKLLEAAEEAGEV 120
Query: 473 EDIEKYSKRTVKVTKQHNDDCKRLLKLMGVPVVEATSEAEAQCAALCKA*KVYGVASEDM 652
E+IEK++KR VKVTKQHN++CK+LL LMG+P V+A EAEA CAAL KA KVY A+EDM
Sbjct: 121 ENIEKFTKRLVKVTKQHNEECKKLLTLMGIPYVDAPCEAEATCAALVKAGKVYAAATEDM 180
Query: 653 DSLTFGAPKFLRHLMDPSSRKIPVMEFDIAKILE 754
D+LTFG P LRHL ++K+P+ EF + ++++
Sbjct: 181 DALTFGTPVLLRHLTASEAKKLPIQEFHLNRVIQ 214
>sp|P39749|FEN1_MOUSE Flap endonuclease 1 OS=Mus musculus GN=Fen1 PE=1 SV=1
Length = 378
Score = 254 bits (648), Expect = 1e-066
Identities = 130/211 (61%), Positives = 164/211 (77%), Gaps = 3/211 (1%)
Frame = +2
Query: 122 GLTKLLADNAPNAMKEQKFESYFGRKIAVDASMSIYQFLIVVGRTGTEMLTNEAGEVTSH 301
GL KL+AD AP+A++E +SYFGRK+A+DASMSIYQFLI V R G ++L NE GE TS
Sbjct: 5 GLAKLIADVAPSAIRENDIKSYFGRKVAIDASMSIYQFLIAV-RQGGDVLQNEEGETTS- 62
Query: 302 LQGMFNRTIRLLEAGIKPVYVFDGKPPELKRQELAKRYSKRADATADLTGAIEAGNKEDI 481
L GMF RTIR +E GIKPVYVFDGKPP+LK ELAKR +RA+A L A EAG +E++
Sbjct: 63 LMGMFYRTIR-MENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQQAQEAGMEEEV 121
Query: 482 EKYSKRTVKVTKQHNDDCKRLLKLMGVPVVEATSEAEAQCAALCKA*KVYGVASEDMDSL 661
EK++KR VKVTKQHND+CK LL LMG+P ++A SEAEA CAAL KA KVY A+EDMD L
Sbjct: 122 EKFTKRLVKVTKQHNDECKHLLSLMGIPYLDAPSEAEASCAALAKAGKVYAAATEDMDCL 181
Query: 662 TFGAPKFLRHLMDPSSRKIPVMEFDIAKILE 754
TFG+P +RHL ++K+P+ EF ++++L+
Sbjct: 182 TFGSPVLMRHLTASEAKKLPIQEFHLSRVLQ 212
>sp|P39750|RAD2_SCHPO DNA repair protein rad2 OS=Schizosaccharomyces pombe
GN=rad2 PE=1 SV=1
Length = 380
Score = 239 bits (609), Expect = 4e-062
Identities = 119/214 (55%), Positives = 154/214 (71%)
Frame = +2
Query: 110 MGIKGLTKLLADNAPNAMKEQKFESYFGRKIAVDASMSIYQFLIVVGRTGTEMLTNEAGE 289
MGIKGL ++L+++AP ++K ++YFGRK+A+DASMS+YQFLI V + L NE GE
Sbjct: 1 MGIKGLAQVLSEHAPASVKHNDIKNYFGRKVAIDASMSLYQFLIQVRSQDGQQLMNEQGE 60
Query: 290 VTSHLQGMFNRTIRLLEAGIKPVYVFDGKPPELKRQELAKRYSKRADATADLTGAIEAGN 469
TSHL GMF RT+R+++ GIKP +VFDGKPP LK ELAKR ++ A D E G
Sbjct: 61 TTSHLMGMFYRTLRIVDNGIKPCFVFDGKPPTLKSGELAKRVARHQKAREDQEETKEVGT 120
Query: 470 KEDIEKYSKRTVKVTKQHNDDCKRLLKLMGVPVVEATSEAEAQCAALCKA*KVYGVASED 649
E +++++KRTVKVT+QHND+ KRLL+LMG+P V A EAEAQCAAL ++ KVY ASED
Sbjct: 121 AEMVDRFAKRTVKVTRQHNDEAKRLLELMGIPFVNAPCEAEAQCAALARSGKVYAAASED 180
Query: 650 MDSLTFGAPKFLRHLMDPSSRKIPVMEFDIAKIL 751
MD+L F AP LRHL RK P+ E++I K L
Sbjct: 181 MDTLCFQAPVLLRHLTFSEQRKEPISEYNIEKAL 214
>sp|O50123|FEN_PYRHO Flap structure-specific endonuclease OS=Pyrococcus
horikoshii GN=fen PE=1 SV=1
Length = 343
Score = 179 bits (452), Expect = 7e-044
Identities = 90/186 (48%), Positives = 121/186 (65%)
Frame = +2
Query: 164 KEQKFESYFGRKIAVDASMSIYQFLIVVGRTGTEMLTNEAGEVTSHLQGMFNRTIRLLEA 343
KE E+ +G+KIA+DA +IYQFL + + L + G +TSHL G+F RTI L+EA
Sbjct: 12 KEIDLENLYGKKIAIDALNAIYQFLSTIRQRDGTPLMDSKGRITSHLSGLFYRTINLMEA 71
Query: 344 GIKPVYVFDGKPPELKRQELAKRYSKRADATADLTGAIEAGNKEDIEKYSKRTVKVTKQH 523
GIKP YVFDGKPPE KR+EL KR R +A A+ GN E+ KY++R KV +
Sbjct: 72 GIKPAYVFDGKPPEFKRKELEKRREAREEAELKWKEALAKGNLEEARKYAQRATKVNEML 131
Query: 524 NDDCKRLLKLMGVPVVEATSEAEAQCAALCKA*KVYGVASEDMDSLTFGAPKFLRHLMDP 703
+D K+LL+LMG+P+++A SE EAQ A + VY AS+D DSL FGAP+ +R+L
Sbjct: 132 IEDAKKLLQLMGIPIIQAPSEGEAQAAYMASKGDVYASASQDYDSLLFGAPRLIRNLTIT 191
Query: 704 SSRKIP 721
RK+P
Sbjct: 192 GKRKMP 197
>sp|O93634|FEN_PYRFU Flap structure-specific endonuclease OS=Pyrococcus furiosus
GN=fen PE=1 SV=1
Length = 340
Score = 177 bits (448), Expect = 2e-043
Identities = 89/186 (47%), Positives = 123/186 (66%)
Frame = +2
Query: 164 KEQKFESYFGRKIAVDASMSIYQFLIVVGRTGTEMLTNEAGEVTSHLQGMFNRTIRLLEA 343
KE + E+ +G+KIA+DA +IYQFL + + L + G +TSHL G+F RTI L+EA
Sbjct: 12 KEIELENLYGKKIAIDALNAIYQFLSTIRQKDGTPLMDSKGRITSHLSGLFYRTINLMEA 71
Query: 344 GIKPVYVFDGKPPELKRQELAKRYSKRADATADLTGAIEAGNKEDIEKYSKRTVKVTKQH 523
GIKPVYVFDG+PPE K++EL KR R +A A+E G E+ KY++R +V +
Sbjct: 72 GIKPVYVFDGEPPEFKKKELEKRREAREEAEEKWREALEKGEIEEARKYAQRATRVNEML 131
Query: 524 NDDCKRLLKLMGVPVVEATSEAEAQCAALCKA*KVYGVASEDMDSLTFGAPKFLRHLMDP 703
+D K+LL+LMG+P+V+A SE EAQ A + VY AS+D DSL FGAP+ +R+L
Sbjct: 132 IEDAKKLLELMGIPIVQAPSEGEAQAAYMAAKGSVYASASQDYDSLLFGAPRLVRNLTIT 191
Query: 704 SSRKIP 721
RK+P
Sbjct: 192 GKRKLP 197
>sp|B6YWX4|FEN_THEON Flap structure-specific endonuclease OS=Thermococcus
onnurineus (strain NA1) GN=fen PE=3 SV=1
Length = 341
Score = 176 bits (444), Expect = 6e-043
Identities = 88/186 (47%), Positives = 123/186 (66%)
Frame = +2
Query: 164 KEQKFESYFGRKIAVDASMSIYQFLIVVGRTGTEMLTNEAGEVTSHLQGMFNRTIRLLEA 343
KE + E+ +GR++A+DA +IYQFL + + L + G +TSHL G+F RTI L+EA
Sbjct: 12 KEIELENLYGRRVAIDAFNAIYQFLSTIRQRDGTPLMDSQGRITSHLSGLFYRTINLMEA 71
Query: 344 GIKPVYVFDGKPPELKRQELAKRYSKRADATADLTGAIEAGNKEDIEKYSKRTVKVTKQH 523
GIKP Y+FDGKPP+ K++EL KR R +A A+E G+ E+ +KY+ R +V +
Sbjct: 72 GIKPAYIFDGKPPDFKKRELEKRREAREEAEEKWYEALERGDLEEAKKYAMRATRVNEGL 131
Query: 524 NDDCKRLLKLMGVPVVEATSEAEAQCAALCKA*KVYGVASEDMDSLTFGAPKFLRHLMDP 703
+D K LL+LMG+PV++A SE EAQ A + KVY AS+D DSL FGAPK +R+L
Sbjct: 132 INDAKTLLELMGIPVIQAPSEGEAQAAYMAAKKKVYASASQDYDSLLFGAPKLVRNLTIT 191
Query: 704 SSRKIP 721
RK+P
Sbjct: 192 GRRKLP 197
>sp|Q5JGN0|FEN_PYRKO Flap structure-specific endonuclease OS=Pyrococcus
kodakaraensis GN=fen PE=3 SV=1
Length = 340
Score = 175 bits (442), Expect = 1e-042
Identities = 88/186 (47%), Positives = 123/186 (66%)
Frame = +2
Query: 164 KEQKFESYFGRKIAVDASMSIYQFLIVVGRTGTEMLTNEAGEVTSHLQGMFNRTIRLLEA 343
KE + ES +G+K+A+DA ++YQFL + + L + G +TSHL G F RTI L+EA
Sbjct: 12 KEIELESLYGKKVAIDAFNAMYQFLSTIRQRDGTPLMDSQGRITSHLSGFFYRTINLMEA 71
Query: 344 GIKPVYVFDGKPPELKRQELAKRYSKRADATADLTGAIEAGNKEDIEKYSKRTVKVTKQH 523
GIKP YVFDGKPP+ K++EL KR R +A A+E G+ E+ +KY+ R +V ++
Sbjct: 72 GIKPAYVFDGKPPDFKKRELEKRREAREEAEEKWYEALEKGDLEEAKKYAMRATRVNEEL 131
Query: 524 NDDCKRLLKLMGVPVVEATSEAEAQCAALCKA*KVYGVASEDMDSLTFGAPKFLRHLMDP 703
+D K+LL+LMG+PVV+A SE EAQ A + VY AS+D DSL FGAP+ +R+L
Sbjct: 132 INDAKKLLELMGIPVVQAPSEGEAQAAYMAAKKAVYASASQDYDSLLFGAPRLVRNLTIT 191
Query: 704 SSRKIP 721
RK+P
Sbjct: 192 GRRKLP 197
>sp|Q9V0P9|FEN_PYRAB Flap structure-specific endonuclease OS=Pyrococcus abyssi
GN=fen PE=3 SV=1
Length = 343
Score = 173 bits (437), Expect = 4e-042
Identities = 88/186 (47%), Positives = 121/186 (65%)
Frame = +2
Query: 164 KEQKFESYFGRKIAVDASMSIYQFLIVVGRTGTEMLTNEAGEVTSHLQGMFNRTIRLLEA 343
KE + E+ +G+KIA+DA +IYQFL + + L + G +TSHL G+F RTI L+EA
Sbjct: 12 KEIELENLYGKKIAIDALNAIYQFLSTIRQRDGTPLMDSKGRITSHLSGLFYRTINLMEA 71
Query: 344 GIKPVYVFDGKPPELKRQELAKRYSKRADATADLTGAIEAGNKEDIEKYSKRTVKVTKQH 523
GIKPVYVFDGKPP K++EL KR R +A A+ G+ E+ KY++R KV +
Sbjct: 72 GIKPVYVFDGKPPAFKKKELEKRREAREEAEIKWKEALAKGDIEEARKYAQRATKVNEML 131
Query: 524 NDDCKRLLKLMGVPVVEATSEAEAQCAALCKA*KVYGVASEDMDSLTFGAPKFLRHLMDP 703
+D K+LL+LMG+P+V+A SE EAQ A + VY AS+D DSL FG P+ +R+L
Sbjct: 132 IEDAKKLLQLMGIPIVQAPSEGEAQAAYMAGKGDVYASASQDYDSLLFGTPRLVRNLTIT 191
Query: 704 SSRKIP 721
RK+P
Sbjct: 192 GKRKMP 197
>sp|Q8ZYN2|FEN_PYRAE Flap structure-specific endonuclease OS=Pyrobaculum
aerophilum GN=fen PE=3 SV=1
Length = 346
Score = 173 bits (436), Expect = 5e-042
Identities = 93/199 (46%), Positives = 125/199 (62%)
Frame = +2
Query: 122 GLTKLLADNAPNAMKEQKFESYFGRKIAVDASMSIYQFLIVVGRTGTEMLTNEAGEVTSH 301
G+T+L +E K ES G+ IA+DA ++YQFL + + L + AG +TSH
Sbjct: 2 GVTELGKLIGKEVRREVKLESLSGKCIALDAYNALYQFLASIRQPDGTPLMDRAGRITSH 61
Query: 302 LQGMFNRTIRLLEAGIKPVYVFDGKPPELKRQELAKRYSKRADATADLTGAIEAGNKEDI 481
L G+F RTI LLEAGI+PVYVFDGKPPE K E+ +R R A ++ AI+ G +ED+
Sbjct: 62 LSGLFYRTINLLEAGIRPVYVFDGKPPEFKLAEIEERRKTREKAMEEVLRAIKEGRREDV 121
Query: 482 EKYSKRTVKVTKQHNDDCKRLLKLMGVPVVEATSEAEAQCAALCKA*KVYGVASEDMDSL 661
KY+KR V +T + D+ KRLL MGVP V+A SE EAQ A + + + V S+D DSL
Sbjct: 122 AKYAKRAVFITSEMVDEAKRLLSYMGVPWVQAPSEGEAQAAYMARKGHCWAVGSQDYDSL 181
Query: 662 TFGAPKFLRHLMDPSSRKI 718
FG+PK +R+L RKI
Sbjct: 182 LFGSPKLVRNLAVSPKRKI 200
>sp|A4WNC4|FEN_PYRAR Flap structure-specific endonuclease OS=Pyrobaculum
arsenaticum (strain DSM 13514 / JCM 11321) GN=fen PE=3 SV=1
Length = 346
Score = 170 bits (429), Expect = 3e-041
Identities = 87/199 (43%), Positives = 127/199 (63%)
Frame = +2
Query: 122 GLTKLLADNAPNAMKEQKFESYFGRKIAVDASMSIYQFLIVVGRTGTEMLTNEAGEVTSH 301
G+T+L A +E K E+ GR +A+DA ++YQFL + + L + AG +TSH
Sbjct: 2 GVTELGKLIGKEARREVKLEALAGRCVALDAYNALYQFLASIRQPDGTPLMDRAGRITSH 61
Query: 302 LQGMFNRTIRLLEAGIKPVYVFDGKPPELKRQELAKRYSKRADATADLTGAIEAGNKEDI 481
+ G+F RTI L+EAGIKPVYVFDGKPPE K E+ +R + AT +L AI+ G ++++
Sbjct: 62 ISGLFYRTINLMEAGIKPVYVFDGKPPEFKLAEIEERRKAKEKATEELVRAIKEGRRDEV 121
Query: 482 EKYSKRTVKVTKQHNDDCKRLLKLMGVPVVEATSEAEAQCAALCKA*KVYGVASEDMDSL 661
KY+KR + +T + +D K+LL MGVP V+A SE EAQ A + + + V S+D DSL
Sbjct: 122 AKYAKRAIFLTNEMVEDAKKLLTYMGVPWVQAPSEGEAQAAYMARRGHCWAVGSQDYDSL 181
Query: 662 TFGAPKFLRHLMDPSSRKI 718
FG+P+ +R+L RK+
Sbjct: 182 LFGSPRLVRNLATSPKRKV 200
>sp|C5A639|FEN_THEGJ Flap structure-specific endonuclease OS=Thermococcus
gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=fen PE=3 SV=1
Length = 339
Score = 170 bits (429), Expect = 3e-041
Identities = 87/186 (46%), Positives = 120/186 (64%)
Frame = +2
Query: 164 KEQKFESYFGRKIAVDASMSIYQFLIVVGRTGTEMLTNEAGEVTSHLQGMFNRTIRLLEA 343
KE + E+ +G+K+A+DA ++YQFL + + L + G +TSHL G F RTI L+EA
Sbjct: 12 KEIELENLYGKKVAIDAFNAMYQFLSTIRQRDGTPLMDSKGRITSHLSGFFYRTINLMEA 71
Query: 344 GIKPVYVFDGKPPELKRQELAKRYSKRADATADLTGAIEAGNKEDIEKYSKRTVKVTKQH 523
GIKP YVFDG+PP K++EL KR R +A A+E G E+ +KY+ R K+ +
Sbjct: 72 GIKPAYVFDGEPPAFKKKELEKRREAREEAEEKWHEALERGEIEEAKKYAMRATKLNETL 131
Query: 524 NDDCKRLLKLMGVPVVEATSEAEAQCAALCKA*KVYGVASEDMDSLTFGAPKFLRHLMDP 703
+D K+LL LMGVPVV+A SE EAQ A + +VY AS+D DSL FGAP+ +R+L
Sbjct: 132 IEDAKKLLGLMGVPVVQAPSEGEAQAAYMAAKKRVYASASQDYDSLLFGAPRLVRNLTIT 191
Query: 704 SSRKIP 721
RK+P
Sbjct: 192 GRRKLP 197
>sp|A3MY15|FEN_PYRCJ Flap structure-specific endonuclease OS=Pyrobaculum
calidifontis (strain JCM 11548 / VA1) GN=fen PE=3 SV=1
Length = 346
Score = 169 bits (426), Expect = 7e-041
Identities = 88/199 (44%), Positives = 125/199 (62%)
Frame = +2
Query: 122 GLTKLLADNAPNAMKEQKFESYFGRKIAVDASMSIYQFLIVVGRTGTEMLTNEAGEVTSH 301
G+T+L A +E K ES G+ +A+DA ++YQFL + + L + AG +TSH
Sbjct: 2 GVTELGKLIGKEARREIKLESLAGKCVALDAYNALYQFLASIRQPDGTPLMDRAGRITSH 61
Query: 302 LQGMFNRTIRLLEAGIKPVYVFDGKPPELKRQELAKRYSKRADATADLTGAIEAGNKEDI 481
L G+F RTI LLEAG+KPVYVFDGKPPE K E+ +R + A ++ AI G +ED+
Sbjct: 62 LSGLFYRTINLLEAGVKPVYVFDGKPPEFKLLEIEQRKKAKEKALEEVEKAIREGRREDV 121
Query: 482 EKYSKRTVKVTKQHNDDCKRLLKLMGVPVVEATSEAEAQCAALCKA*KVYGVASEDMDSL 661
KY+KR + +T + +D K+LL MG+P V+A SE EAQ A + K + V S+D DSL
Sbjct: 122 AKYAKRAIFLTSEMVEDAKKLLTYMGIPWVQAPSEGEAQAAHMAKRGHCWAVGSQDYDSL 181
Query: 662 TFGAPKFLRHLMDPSSRKI 718
FG+P+ +R+L RK+
Sbjct: 182 LFGSPRLVRNLAVSPKRKV 200
>sp|C6A1U9|FEN_THESM Flap structure-specific endonuclease OS=Thermococcus
sibiricus (strain MM 739 / DSM 12597) GN=fen PE=3 SV=1
Length = 340
Score = 168 bits (424), Expect = 1e-040
Identities = 87/186 (46%), Positives = 119/186 (63%)
Frame = +2
Query: 164 KEQKFESYFGRKIAVDASMSIYQFLIVVGRTGTEMLTNEAGEVTSHLQGMFNRTIRLLEA 343
KE + E+ GRK+A+DA +IYQFL + + L + G +TSHL G+F RTI L+EA
Sbjct: 12 KELELENLNGRKVAIDAFNAIYQFLSTIRQKDGTPLMDSKGRITSHLSGLFYRTINLMEA 71
Query: 344 GIKPVYVFDGKPPELKRQELAKRYSKRADATADLTGAIEAGNKEDIEKYSKRTVKVTKQH 523
GIKP YVFDGKPPE K++EL KR R +A A+ G E+ +KY++R K+ +
Sbjct: 72 GIKPAYVFDGKPPEFKKKELEKRAETREEALEKWEIALARGELEEAKKYAQRASKINEIL 131
Query: 524 NDDCKRLLKLMGVPVVEATSEAEAQCAALCKA*KVYGVASEDMDSLTFGAPKFLRHLMDP 703
+D K+LL+LMG+P V+A SE EAQ A + V+ AS+D DSL FG PK +R+L
Sbjct: 132 IEDAKKLLELMGIPWVQAPSEGEAQAAYMASKGDVWASASQDYDSLLFGTPKLVRNLTIT 191
Query: 704 SSRKIP 721
RK+P
Sbjct: 192 GKRKLP 197
>sp|A1RSC7|FEN_PYRIL Flap structure-specific endonuclease OS=Pyrobaculum
islandicum (strain DSM 4184 / JCM 9189) GN=fen PE=3 SV=1
Length = 346
Score = 167 bits (421), Expect = 3e-040
Identities = 91/199 (45%), Positives = 123/199 (61%)
Frame = +2
Query: 122 GLTKLLADNAPNAMKEQKFESYFGRKIAVDASMSIYQFLIVVGRTGTEMLTNEAGEVTSH 301
G+T+L + +E K E+ G+ IA+DA S+YQFL + + L + G +TSH
Sbjct: 2 GVTELGKLIGKDIRREVKLENLAGKCIALDAYNSLYQFLASIRQPDGTPLMDRVGRITSH 61
Query: 302 LQGMFNRTIRLLEAGIKPVYVFDGKPPELKRQELAKRYSKRADATADLTGAIEAGNKEDI 481
L G+F RTI L+EAGIKPVYVFDGKPPE K E+ +R + A ++ AI+ G KED+
Sbjct: 62 LSGLFYRTINLMEAGIKPVYVFDGKPPEFKLAEIEERRKVKEKAMEEVLKAIKEGRKEDV 121
Query: 482 EKYSKRTVKVTKQHNDDCKRLLKLMGVPVVEATSEAEAQCAALCKA*KVYGVASEDMDSL 661
KY KR V +T +D K+LL MGVP V+A SE EAQ A + K + V S+D DSL
Sbjct: 122 AKYMKRAVFLTSDMVEDAKKLLTYMGVPWVQAPSEGEAQAAHMAKRGHCWAVGSQDYDSL 181
Query: 662 TFGAPKFLRHLMDPSSRKI 718
FG+P+ +R+L RKI
Sbjct: 182 LFGSPRLVRNLAVSPRRKI 200
>sp|B1YC46|FEN_THENV Flap structure-specific endonuclease OS=Thermoproteus
neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=fen PE=3 SV=1
Length = 349
Score = 163 bits (412), Expect = 3e-039
Identities = 89/198 (44%), Positives = 121/198 (61%)
Frame = +2
Query: 122 GLTKLLADNAPNAMKEQKFESYFGRKIAVDASMSIYQFLIVVGRTGTEMLTNEAGEVTSH 301
G+T+L A +E K E+ GR IA+DA ++YQFL + + L + G VTSH
Sbjct: 2 GVTELGKLIGREARREIKLENLAGRCIALDAYNALYQFLASIRQPDGTPLMDRQGRVTSH 61
Query: 302 LQGMFNRTIRLLEAGIKPVYVFDGKPPELKRQELAKRYSKRADATADLTGAIEAGNKEDI 481
L G+F RTI L+EAGIKPVYVFDGKPPE K E+ R + A ++ AI G ++D+
Sbjct: 62 LSGLFYRTINLMEAGIKPVYVFDGKPPEFKLAEIEARRRVKEKAMEEVVKAIREGKRDDV 121
Query: 482 EKYSKRTVKVTKQHNDDCKRLLKLMGVPVVEATSEAEAQCAALCKA*KVYGVASEDMDSL 661
KY KR + +T + +D KRLL MGVP V+A SE EAQ A + K + V S+D DSL
Sbjct: 122 AKYMKRVIFLTNEMVEDAKRLLTYMGVPWVQAPSEGEAQAAHMAKRGHCWAVGSQDYDSL 181
Query: 662 TFGAPKFLRHLMDPSSRK 715
FG+P+ +R+L R+
Sbjct: 182 LFGSPRLVRNLAVSPKRR 199
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,851,905,190
Number of Sequences: 518415
Number of Extensions: 48851905190
Number of Successful Extensions: 346316827
Number of sequences better than 0.0: 0
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