BLASTX 7.6.2
Query= UN11899 /QuerySize=697
(696 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297809651|ref|XP_002872709.1| hypothetical protein ARALYDRAFT... 166 4e-039
gi|27754568|gb|AAO22731.1| unknown protein [Arabidopsis thaliana] 164 9e-039
gi|7267236|emb|CAB80843.1| hypothetical protein [Arabidopsis tha... 164 9e-039
gi|334186358|ref|NP_192387.2| protein mediator 21 [Arabidopsis t... 164 9e-039
gi|242080485|ref|XP_002445011.1| hypothetical protein SORBIDRAFT... 154 2e-035
gi|224076269|ref|XP_002304917.1| predicted protein [Populus tric... 151 8e-035
gi|255556538|ref|XP_002519303.1| conserved hypothetical protein ... 144 1e-032
gi|255628677|gb|ACU14683.1| unknown [Glycine max] 137 2e-030
gi|217071846|gb|ACJ84283.1| unknown [Medicago truncatula] 133 3e-029
gi|325260833|gb|ADZ04651.1| hypothetical protein [Oryza punctata] 132 7e-029
gi|38636817|dbj|BAD03057.1| RNA polymerase II complex component ... 131 9e-029
gi|222639872|gb|EEE68004.1| hypothetical protein OsJ_25959 [Oryz... 131 9e-029
gi|125560061|gb|EAZ05509.1| hypothetical protein OsI_27725 [Oryz... 126 4e-027
gi|325260816|gb|ADZ04635.1| hypothetical protein [Oryza glaberrima] 126 4e-027
gi|294463563|gb|ADE77310.1| unknown [Picea sitchensis] 120 2e-025
gi|4115933|gb|AAD03443.1| contains similarity to human RNA polym... 118 1e-024
gi|326504002|dbj|BAK02787.1| predicted protein [Hordeum vulgare ... 116 3e-024
gi|168022533|ref|XP_001763794.1| predicted protein [Physcomitrel... 107 2e-021
>gi|297809651|ref|XP_002872709.1| hypothetical protein ARALYDRAFT_352398
[Arabidopsis lyrata subsp. lyrata]
Length = 139
Score = 166 bits (418), Expect = 4e-039
Identities = 91/114 (79%), Positives = 96/114 (84%), Gaps = 4/114 (3%)
Frame = +2
Query: 248 PPTAAAAAAAATAATATTAATDADPTAAFPEQPKQLSADLVRAAKQFDALVAALPLSEGG 427
PP + AT TTA DA P FPEQPKQLSA LV+AAKQFDALVAALPLSEGG
Sbjct: 30 PPVQLSPNYPEPPAT-TTAVDDATP---FPEQPKQLSAGLVKAAKQFDALVAALPLSEGG 85
Query: 428 EEAQLKRIAELQVENDVVGQELQKQLEAAEKELKQVQELFGQAADNCLNMKKPE 589
EEAQLKRIA+LQVEND+VGQELQKQLEAAEKELKQVQELFGQAAD+CLNMKKPE
Sbjct: 86 EEAQLKRIAQLQVENDLVGQELQKQLEAAEKELKQVQELFGQAADSCLNMKKPE 139
>gi|27754568|gb|AAO22731.1| unknown protein [Arabidopsis thaliana]
Length = 162
Score = 164 bits (415), Expect = 9e-039
Identities = 91/114 (79%), Positives = 94/114 (82%), Gaps = 4/114 (3%)
Frame = +2
Query: 248 PPTAAAAAAAATAATATTAATDADPTAAFPEQPKQLSADLVRAAKQFDALVAALPLSEGG 427
PP + AT TT DA P FPEQPKQLSA LV+AAKQFDALVAALPLSEGG
Sbjct: 53 PPVQLSPNYPEPPAT-TTVTDDATP---FPEQPKQLSAGLVKAAKQFDALVAALPLSEGG 108
Query: 428 EEAQLKRIAELQVENDVVGQELQKQLEAAEKELKQVQELFGQAADNCLNMKKPE 589
E AQLKRIAELQVEND+VGQELQKQLEAAEKELKQVQELFGQAADNCLNMKKPE
Sbjct: 109 EGAQLKRIAELQVENDLVGQELQKQLEAAEKELKQVQELFGQAADNCLNMKKPE 162
Score = 94 bits (231), Expect = 2e-017
Identities = 48/67 (71%), Positives = 50/67 (74%)
Frame = +2
Query: 83 VTGETPVDGFKKKKKMDIISQLQEQVNSIAAITFNAFGTLQRDAPPVQLSPNYPEPPTAA 262
V GE G + KMDIISQLQEQVN+IAAITFNAFGTLQRDAPPVQLSPNYPEPP
Sbjct: 9 VAGEILSTGLLRFWKMDIISQLQEQVNTIAAITFNAFGTLQRDAPPVQLSPNYPEPPATT 68
Query: 263 AAAAAAT 283
AT
Sbjct: 69 TVTDDAT 75
>gi|7267236|emb|CAB80843.1| hypothetical protein [Arabidopsis thaliana]
Length = 381
Score = 164 bits (415), Expect = 9e-039
Identities = 91/114 (79%), Positives = 94/114 (82%), Gaps = 4/114 (3%)
Frame = +2
Query: 248 PPTAAAAAAAATAATATTAATDADPTAAFPEQPKQLSADLVRAAKQFDALVAALPLSEGG 427
PP + AT TT DA P FPEQPKQLSA LV+AAKQFDALVAALPLSEGG
Sbjct: 272 PPVQLSPNYPEPPAT-TTVTDDATP---FPEQPKQLSAGLVKAAKQFDALVAALPLSEGG 327
Query: 428 EEAQLKRIAELQVENDVVGQELQKQLEAAEKELKQVQELFGQAADNCLNMKKPE 589
E AQLKRIAELQVEND+VGQELQKQLEAAEKELKQVQELFGQAADNCLNMKKPE
Sbjct: 328 EGAQLKRIAELQVENDLVGQELQKQLEAAEKELKQVQELFGQAADNCLNMKKPE 381
Score = 97 bits (239), Expect = 2e-018
Identities = 53/88 (60%), Positives = 61/88 (69%), Gaps = 2/88 (2%)
Frame = +2
Query: 20 TKIENAKQGYSLSSPNTFSCVVTGETPVDGFKKKKKMDIISQLQEQVNSIAAITFNAFGT 199
TK N+++ +++PN V GE G + KMDIISQLQEQVN+IAAITFNAFGT
Sbjct: 209 TKRPNSQRLSVVATPNRL--CVAGEILSTGLLRFWKMDIISQLQEQVNTIAAITFNAFGT 266
Query: 200 LQRDAPPVQLSPNYPEPPTAAAAAAAAT 283
LQRDAPPVQLSPNYPEPP AT
Sbjct: 267 LQRDAPPVQLSPNYPEPPATTTVTDDAT 294
>gi|334186358|ref|NP_192387.2| protein mediator 21 [Arabidopsis thaliana]
Length = 139
Score = 164 bits (415), Expect = 9e-039
Identities = 91/114 (79%), Positives = 94/114 (82%), Gaps = 4/114 (3%)
Frame = +2
Query: 248 PPTAAAAAAAATAATATTAATDADPTAAFPEQPKQLSADLVRAAKQFDALVAALPLSEGG 427
PP + AT TT DA P FPEQPKQLSA LV+AAKQFDALVAALPLSEGG
Sbjct: 30 PPVQLSPNYPEPPAT-TTVTDDATP---FPEQPKQLSAGLVKAAKQFDALVAALPLSEGG 85
Query: 428 EEAQLKRIAELQVENDVVGQELQKQLEAAEKELKQVQELFGQAADNCLNMKKPE 589
E AQLKRIAELQVEND+VGQELQKQLEAAEKELKQVQELFGQAADNCLNMKKPE
Sbjct: 86 EGAQLKRIAELQVENDLVGQELQKQLEAAEKELKQVQELFGQAADNCLNMKKPE 139
>gi|242080485|ref|XP_002445011.1| hypothetical protein SORBIDRAFT_07g002720
[Sorghum bicolor]
Length = 159
Score = 154 bits (387), Expect = 2e-035
Identities = 87/159 (54%), Positives = 106/159 (66%), Gaps = 9/159 (5%)
Frame = +2
Query: 128 MDIISQLQEQVNSIAAITFNAFGTLQRDAPPVQLSPNYPEP------PTAAAAAAAATAA 289
MDII+QLQ+Q++ +A + N FGTLQRDAPP +LS +YP+P P +
Sbjct: 1 MDIITQLQDQLDEMAVLAVNTFGTLQRDAPPDRLSNSYPDPLNPNPKPEDVSTKPQVQGQ 60
Query: 290 TATTAATDADPTAA-FPEQPKQLSADLVRAAKQFDALVAALPLSEGGEEAQLKRIAELQV 466
A P A EQPK +S LV AAK+FDALVAALPLS EE Q+KRI ELQ
Sbjct: 61 PGAPPPAQAQPPAPDLSEQPKAMSHALVLAAKKFDALVAALPLS--SEEDQVKRIQELQA 118
Query: 467 ENDVVGQELQKQLEAAEKELKQVQELFGQAADNCLNMKK 583
EN+VVG ELQKQLEAAE+ELKQV+ LF +A DNC+N K+
Sbjct: 119 ENEVVGLELQKQLEAAERELKQVEVLFNEATDNCINFKR 157
>gi|224076269|ref|XP_002304917.1| predicted protein [Populus trichocarpa]
Length = 137
Score = 151 bits (381), Expect = 8e-035
Identities = 75/91 (82%), Positives = 83/91 (91%)
Frame = +2
Query: 317 DPTAAFPEQPKQLSADLVRAAKQFDALVAALPLSEGGEEAQLKRIAELQVENDVVGQELQ 496
+ A+FPEQPKQ+SA LV+AAKQFDALVAALPLSEGGEEAQLKRIAELQ END VGQELQ
Sbjct: 47 EDAASFPEQPKQMSAALVKAAKQFDALVAALPLSEGGEEAQLKRIAELQAENDAVGQELQ 106
Query: 497 KQLEAAEKELKQVQELFGQAADNCLNMKKPE 589
+QLEAAE+ELK VQELFGQ DNCLN+KKP+
Sbjct: 107 RQLEAAERELKLVQELFGQTTDNCLNLKKPD 137
>gi|255556538|ref|XP_002519303.1| conserved hypothetical protein [Ricinus
communis]
Length = 135
Score = 144 bits (362), Expect = 1e-032
Identities = 72/92 (78%), Positives = 81/92 (88%)
Frame = +2
Query: 314 ADPTAAFPEQPKQLSADLVRAAKQFDALVAALPLSEGGEEAQLKRIAELQVENDVVGQEL 493
++P +QPK +SA LV+AAKQFDALVAALPL+EGGEEAQLKRIAELQ END VGQEL
Sbjct: 44 SNPAEDIADQPKLMSAALVKAAKQFDALVAALPLAEGGEEAQLKRIAELQAENDAVGQEL 103
Query: 494 QKQLEAAEKELKQVQELFGQAADNCLNMKKPE 589
Q+QLEAAEKELKQVQELF QA DNCLN+KKP+
Sbjct: 104 QRQLEAAEKELKQVQELFSQATDNCLNLKKPD 135
>gi|255628677|gb|ACU14683.1| unknown [Glycine max]
Length = 139
Score = 137 bits (343), Expect = 2e-030
Identities = 68/86 (79%), Positives = 76/86 (88%)
Frame = +2
Query: 332 FPEQPKQLSADLVRAAKQFDALVAALPLSEGGEEAQLKRIAELQVENDVVGQELQKQLEA 511
F EQPK +S LV+AAKQFDALVAALP+SE GEEAQLKRI+ELQ END +G ELQKQLEA
Sbjct: 52 FSEQPKLMSTTLVKAAKQFDALVAALPISESGEEAQLKRISELQAENDAIGLELQKQLEA 111
Query: 512 AEKELKQVQELFGQAADNCLNMKKPE 589
AEKEL QVQELF QA+DNCLN+KKP+
Sbjct: 112 AEKELNQVQELFRQASDNCLNLKKPD 137
>gi|217071846|gb|ACJ84283.1| unknown [Medicago truncatula]
Length = 139
Score = 133 bits (333), Expect = 3e-029
Identities = 67/88 (76%), Positives = 75/88 (85%)
Frame = +2
Query: 326 AAFPEQPKQLSADLVRAAKQFDALVAALPLSEGGEEAQLKRIAELQVENDVVGQELQKQL 505
A F E+PK + A LV+AAKQFD LVA+LP+SE G EAQLKRIAELQ END VGQELQKQL
Sbjct: 50 ANFSEEPKLMGASLVKAAKQFDLLVASLPISETGGEAQLKRIAELQAENDAVGQELQKQL 109
Query: 506 EAAEKELKQVQELFGQAADNCLNMKKPE 589
EAAEKEL QVQEL+ QA DNCLN+KKP+
Sbjct: 110 EAAEKELNQVQELYRQATDNCLNLKKPD 137
>gi|325260833|gb|ADZ04651.1| hypothetical protein [Oryza punctata]
Length = 157
Score = 132 bits (330), Expect = 7e-029
Identities = 76/129 (58%), Positives = 87/129 (67%), Gaps = 6/129 (4%)
Frame = +2
Query: 215 PPVQLSPNYPEP----PTAAAAAAAATAATATTAATDADPTAAFPEQPKQLSADLVRAAK 382
P +PN +P P AAAAAA A AA A A P E PK +S LV AAK
Sbjct: 31 PAAAANPNPDDPAQPQPGAAAAAAGAPAAQAQAPPAQAPPALDLAEHPKAMSHALVLAAK 90
Query: 383 QFDALVAALPLSEGGEEAQLKRIAELQVENDVVGQELQKQLEAAEKELKQVQELFGQAAD 562
+FDALV+ALPLS EE QLKRI ELQ EN+VVG ELQKQLEAAE ELKQV+ LF +A D
Sbjct: 91 KFDALVSALPLS--SEEDQLKRIKELQAENEVVGSELQKQLEAAELELKQVEALFNEATD 148
Query: 563 NCLNMKKPE 589
+C+N+KKPE
Sbjct: 149 HCINLKKPE 157
>gi|38636817|dbj|BAD03057.1| RNA polymerase II complex component SRB7
protein-like [Oryza sativa Japonica Group]
Length = 236
Score = 131 bits (329), Expect = 9e-029
Identities = 77/127 (60%), Positives = 87/127 (68%), Gaps = 3/127 (2%)
Frame = +2
Query: 212 APPVQLSPNYPEPPTAAAAAAAATAATATTAATDADPTAA-FPEQPKQLSADLVRAAKQF 388
A P P P+P AAAAAA A AA A A P A E PK +S LV AAK+F
Sbjct: 112 ANPNPDDPAQPQPGAAAAAAAGAPAAQAQAPPAQAQPPALDLAEHPKAMSHALVLAAKKF 171
Query: 389 DALVAALPLSEGGEEAQLKRIAELQVENDVVGQELQKQLEAAEKELKQVQELFGQAADNC 568
DALV+ALPLS EE QLKRI ELQ EN+VVG ELQKQLEAAE ELKQV+ LF +A D+C
Sbjct: 172 DALVSALPLS--SEEDQLKRIKELQAENEVVGTELQKQLEAAELELKQVEALFNEATDHC 229
Query: 569 LNMKKPE 589
+N+KKPE
Sbjct: 230 INLKKPE 236
>gi|222639872|gb|EEE68004.1| hypothetical protein OsJ_25959 [Oryza sativa
Japonica Group]
Length = 471
Score = 131 bits (329), Expect = 9e-029
Identities = 77/127 (60%), Positives = 87/127 (68%), Gaps = 3/127 (2%)
Frame = +2
Query: 212 APPVQLSPNYPEPPTAAAAAAAATAATATTAATDADPTAA-FPEQPKQLSADLVRAAKQF 388
A P P P+P AAAAAA A AA A A P A E PK +S LV AAK+F
Sbjct: 347 ANPNPDDPAQPQPGAAAAAAAGAPAAQAQAPPAQAQPPALDLAEHPKAMSHALVLAAKKF 406
Query: 389 DALVAALPLSEGGEEAQLKRIAELQVENDVVGQELQKQLEAAEKELKQVQELFGQAADNC 568
DALV+ALPLS EE QLKRI ELQ EN+VVG ELQKQLEAAE ELKQV+ LF +A D+C
Sbjct: 407 DALVSALPLS--SEEDQLKRIKELQAENEVVGTELQKQLEAAELELKQVEALFNEATDHC 464
Query: 569 LNMKKPE 589
+N+KKPE
Sbjct: 465 INLKKPE 471
>gi|125560061|gb|EAZ05509.1| hypothetical protein OsI_27725 [Oryza sativa Indica
Group]
Length = 172
Score = 126 bits (315), Expect = 4e-027
Identities = 72/126 (57%), Positives = 82/126 (65%), Gaps = 2/126 (1%)
Frame = +2
Query: 212 APPVQLSPNYPEPPTAAAAAAAATAATATTAATDADPTAAFPEQPKQLSADLVRAAKQFD 391
A P P P+P AAAA A A A P E PK +S LV AAK+FD
Sbjct: 49 ANPNPDDPAQPQPGAAAAAPGAPAAQAQAPPAQAQPPALDLAEHPKAMSHALVLAAKKFD 108
Query: 392 ALVAALPLSEGGEEAQLKRIAELQVENDVVGQELQKQLEAAEKELKQVQELFGQAADNCL 571
ALV+ALPLS EE QLKRI ELQ EN+VVG ELQKQLEAAE ELKQV+ LF +A D+C+
Sbjct: 109 ALVSALPLS--SEEDQLKRIKELQAENEVVGSELQKQLEAAELELKQVEALFNEATDHCI 166
Query: 572 NMKKPE 589
N+KKPE
Sbjct: 167 NLKKPE 172
>gi|325260816|gb|ADZ04635.1| hypothetical protein [Oryza glaberrima]
Length = 159
Score = 126 bits (315), Expect = 4e-027
Identities = 72/126 (57%), Positives = 82/126 (65%), Gaps = 2/126 (1%)
Frame = +2
Query: 212 APPVQLSPNYPEPPTAAAAAAAATAATATTAATDADPTAAFPEQPKQLSADLVRAAKQFD 391
A P P P+P AAAA A A A P E PK +S LV AAK+FD
Sbjct: 36 ANPNPDDPAQPQPGAAAAAPGAPAAQAQAPPAQAQPPALDLAEHPKAMSHALVLAAKKFD 95
Query: 392 ALVAALPLSEGGEEAQLKRIAELQVENDVVGQELQKQLEAAEKELKQVQELFGQAADNCL 571
ALV+ALPLS EE QLKRI ELQ EN+VVG ELQKQLEAAE ELKQV+ LF +A D+C+
Sbjct: 96 ALVSALPLS--SEEDQLKRIKELQAENEVVGSELQKQLEAAELELKQVEALFNEATDHCI 153
Query: 572 NMKKPE 589
N+KKPE
Sbjct: 154 NLKKPE 159
>gi|294463563|gb|ADE77310.1| unknown [Picea sitchensis]
Length = 137
Score = 120 bits (300), Expect = 2e-025
Identities = 61/94 (64%), Positives = 72/94 (76%)
Frame = +2
Query: 305 ATDADPTAAFPEQPKQLSADLVRAAKQFDALVAALPLSEGGEEAQLKRIAELQVENDVVG 484
+T A+ A EQPK ++ LV+ AKQFDALV ALPLSEGGEE QL +IA+LQ EN+ VG
Sbjct: 43 STSAEDPAIVAEQPKAMTTSLVQEAKQFDALVDALPLSEGGEELQLMQIAQLQAENEAVG 102
Query: 485 QELQKQLEAAEKELKQVQELFGQAADNCLNMKKP 586
+ELQK++EAAE E KQ QELF ADNCLNMK P
Sbjct: 103 KELQKEIEAAELEFKQRQELFDMIADNCLNMKPP 136
>gi|4115933|gb|AAD03443.1| contains similarity to human RNA polymerase II
complex component SRB7 (GB:U52960) [Arabidopsis thaliana]
Length = 168
Score = 118 bits (294), Expect = 1e-024
Identities = 73/145 (50%), Positives = 87/145 (60%), Gaps = 18/145 (12%)
Frame = +2
Query: 128 MDIISQLQEQVNSIAAITFNAFGTLQRDAPPVQLSPNYPEPPTAAAAAAAATAATATTAA 307
MDIISQLQEQVN+IAAITFNAFGTLQRDAPPVQLSPNYPEPP TT
Sbjct: 1 MDIISQLQEQVNTIAAITFNAFGTLQRDAPPVQLSPNYPEPP------------ATTTVT 48
Query: 308 TDADPTAAFPEQPKQLSADLVRAAKQFDALVAALPLSEGGE-----EAQLKRIAEL-QVE 469
DA P P+Q + A + EG + E Q+K++ + +VE
Sbjct: 49 DDATPFPEQPKQLSAGLVKAAKQFDALVAALPLSEGGEGAQLKRIAELQVKQVTPICRVE 108
Query: 470 NDVVGQELQKQLEAAEKELKQVQEL 544
ND+VGQELQKQLEAAE + +V E+
Sbjct: 109 NDLVGQELQKQLEAAEGAVAKVAEV 133
>gi|326504002|dbj|BAK02787.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 185
Score = 116 bits (290), Expect = 3e-024
Identities = 74/149 (49%), Positives = 90/149 (60%), Gaps = 8/149 (5%)
Frame = +2
Query: 158 VNSIAAITFNAFGTLQRDAPPVQLSPNYPEPPTAAAAAAAATAATATTAA-----TDADP 322
VN+ + +A ++ P L+PN P P A+ A A A A P
Sbjct: 40 VNTFGTLQRDAPPVRLSNSYPDPLNPN-PNPDGPASQPQAPPAPGAPPPAPLPPQAQPQP 98
Query: 323 TAAFPEQPKQLSADLVRAAKQFDALVAALPLSEGGEEAQLKRIAELQVENDVVGQELQKQ 502
EQPK +S LV AAK+FDALVAALPLS EE QLKRI ELQ EN+VVG ELQKQ
Sbjct: 99 ALDLDEQPKAMSHALVLAAKKFDALVAALPLS--SEEDQLKRIQELQAENEVVGLELQKQ 156
Query: 503 LEAAEKELKQVQELFGQAADNCLNMKKPE 589
LEAAE EL +V+ LF +A DNC+N+KKP+
Sbjct: 157 LEAAELELHRVEVLFNEATDNCINLKKPD 185
>gi|168022533|ref|XP_001763794.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 132
Score = 107 bits (266), Expect = 2e-021
Identities = 52/83 (62%), Positives = 66/83 (79%)
Frame = +2
Query: 338 EQPKQLSADLVRAAKQFDALVAALPLSEGGEEAQLKRIAELQVENDVVGQELQKQLEAAE 517
EQPK+++ V+A ++FDALV+ALP +GGEEAQLKRIAEL+ EN+ GQELQ++LEAA+
Sbjct: 50 EQPKEMATAFVQAVQRFDALVSALPDIQGGEEAQLKRIAELEAENEAFGQELQRELEAAD 109
Query: 518 KELKQVQELFGQAADNCLNMKKP 586
EL Q+QELF A DN L MK P
Sbjct: 110 SELNQIQELFDMATDNWLQMKPP 132
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,399,880,566,028
Number of Sequences: 15229318
Number of Extensions: 1399880566028
Number of Successful Extensions: 384417364
Number of sequences better than 0.0: 0
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