BLASTX 7.6.2
Query= UN11956 /QuerySize=766
(765 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P09234|RU1C_HUMAN U1 small nuclear ribonucleoprotein C OS=Hom... 114 1e-024
sp|Q62241|RU1C_MOUSE U1 small nuclear ribonucleoprotein C OS=Mus... 113 2e-024
sp|Q32PA0|RU1C_BOVIN U1 small nuclear ribonucleoprotein C OS=Bos... 112 3e-024
sp|Q03369|RU1C_XENLA U1 small nuclear ribonucleoprotein C OS=Xen... 111 7e-024
sp|Q54YA5|RU1C_DICDI U1 small nuclear ribonucleoprotein C OS=Dic... 99 3e-020
sp|B2AWS3|PAN1_PODAN Actin cytoskeleton-regulatory complex prote... 71 8e-012
sp|Q9JL04|FMN2_MOUSE Formin-2 OS=Mus musculus GN=Fmn2 PE=1 SV=2 68 5e-011
sp|Q9T0K5|LRX3_ARATH Leucine-rich repeat extensin-like protein 3... 68 7e-011
sp|Q54WH2|FORA_DICDI Formin-A OS=Dictyostelium discoideum GN=for... 67 9e-011
sp|Q9P794|RU1C_SCHPO U1 small nuclear ribonucleoprotein C OS=Sch... 67 9e-011
sp|Q95JC9|PRP_PIG Basic proline-rich protein OS=Sus scrofa PE=1 ... 65 4e-010
sp|P13983|EXTN_TOBAC Extensin OS=Nicotiana tabacum GN=HRGPNT3 PE... 64 1e-009
sp|Q84ZL0|FH5_ORYSJ Formin-like protein 5 OS=Oryza sativa subsp.... 62 4e-009
sp|Q1DQC1|PAN1_COCIM Actin cytoskeleton-regulatory complex prote... 62 4e-009
sp|Q7SAT8|PAN1_NEUCR Actin cytoskeleton-regulatory complex prote... 60 2e-008
sp|Q0GNC1|INF2_MOUSE Inverted formin-2 OS=Mus musculus GN=Inf2 P... 57 9e-008
sp|Q9FPQ6|GP1_CHLRE Vegetative cell wall protein gp1 OS=Chlamydo... 57 1e-007
sp|Q0ULF5|SEC31_PHANO Protein transport protein SEC31 OS=Phaeosp... 57 1e-007
>sp|P09234|RU1C_HUMAN U1 small nuclear ribonucleoprotein C OS=Homo sapiens
GN=SNRPC PE=1 SV=1
Length = 159
Score = 114 bits (283), Expect = 1e-024
Identities = 67/151 (44%), Positives = 84/151 (55%), Gaps = 16/151 (10%)
Frame = +2
Query: 41 MPRYYCDYCDTYLTHDSPSVRKQHNSGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 220
MP++YCDYCDTYLTHDSPSVRK H SG KHK NV+ YYQ++ E+Q QSLID+
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------T 53
Query: 221 TAAYNQVGAVFNQHMLARPRLPMMPMP--MPMGMRPPILPRPIIPGQGYMPPPGVPQMMA 394
TAA+ Q P M+P P +P RP ++P P + G PP +P M
Sbjct: 54 TAAFQQGKIPPTPFSAPPPAGAMIPPPPSLPGPPRPGMMPAPHMGG-----PPMMPMMGP 108
Query: 395 PPGGPLPPPPPQNGILRPPGLAPIPGQGGAP 487
PP G +P P +RPP +P G P
Sbjct: 109 PPPGMMPVGPAPG--MRPPMGGHMPMMPGPP 137
>sp|Q62241|RU1C_MOUSE U1 small nuclear ribonucleoprotein C OS=Mus musculus
GN=Snrpc PE=2 SV=1
Length = 159
Score = 113 bits (281), Expect = 2e-024
Identities = 67/151 (44%), Positives = 84/151 (55%), Gaps = 16/151 (10%)
Frame = +2
Query: 41 MPRYYCDYCDTYLTHDSPSVRKQHNSGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 220
MP++YCDYCDTYLTHDSPSVRK H SG KHK NV+ YYQ++ E+Q QSLID+
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------T 53
Query: 221 TAAYNQVGAVFNQHMLARPRLPMMPMP--MPMGMRPPILPRPIIPGQGYMPPPGVPQMMA 394
TAA+ Q P M+P P +P RP ++P P + G PP +P M
Sbjct: 54 TAAFQQGKIPPAPFSAPPPAGAMIPPPPSLPGPPRPGMMPAPHMGG-----PPMMPMMGP 108
Query: 395 PPGGPLPPPPPQNGILRPPGLAPIPGQGGAP 487
PP G +P P +RPP +P G P
Sbjct: 109 PPPGMMPVGPAPG--MRPPMGGHMPMMPGPP 137
>sp|Q32PA0|RU1C_BOVIN U1 small nuclear ribonucleoprotein C OS=Bos taurus
GN=SNRPC PE=2 SV=1
Length = 159
Score = 112 bits (279), Expect = 3e-024
Identities = 67/151 (44%), Positives = 83/151 (54%), Gaps = 16/151 (10%)
Frame = +2
Query: 41 MPRYYCDYCDTYLTHDSPSVRKQHNSGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 220
MP+ YCDYCDTYLTHDSPSVRK H SG KHK NV+ YYQ++ E+Q QSLID+
Sbjct: 1 MPKLYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------T 53
Query: 221 TAAYNQVGAVFNQHMLARPRLPMMPMP--MPMGMRPPILPRPIIPGQGYMPPPGVPQMMA 394
TAA+ Q P M+P P +P RP ++P P + G PP +P M
Sbjct: 54 TAAFQQGKIPPTPFSAPPPAGAMIPPPPSLPGPPRPGMMPAPHMGG-----PPMMPMMGP 108
Query: 395 PPGGPLPPPPPQNGILRPPGLAPIPGQGGAP 487
PP G +P P +RPP +P G P
Sbjct: 109 PPPGMMPVGPAPG--MRPPMGGHMPMMPGPP 137
>sp|Q03369|RU1C_XENLA U1 small nuclear ribonucleoprotein C OS=Xenopus laevis
GN=snrp1c PE=2 SV=1
Length = 159
Score = 111 bits (276), Expect = 7e-024
Identities = 69/152 (45%), Positives = 87/152 (57%), Gaps = 18/152 (11%)
Frame = +2
Query: 41 MPRYYCDYCDTYLTHDSPSVRKQHNSGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 220
MP++YCDYCDTYLTHDSPSVRK H SG KHK NV+ YYQ++ E+Q QSLID+
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------T 53
Query: 221 TAAYNQVGAVFNQHMLARPR-LPMMPMPMPMG--MRPPILPRPIIPGQGYMPPPGVPQMM 391
TAA+ Q G + A P M+P P +G RP ++P P + G PP +P M
Sbjct: 54 TAAFQQ-GKIPPTPFAAPPAGSAMIPPPPSLGGPPRPGMMPAPPMAG-----PPMMPMMG 107
Query: 392 APPGGPLPPPPPQNGILRPPGLAPIPGQGGAP 487
PP G +P +RPP A +P G P
Sbjct: 108 PPPPGMMPVGHGPG--MRPPMGAHMPMMPGPP 137
>sp|Q54YA5|RU1C_DICDI U1 small nuclear ribonucleoprotein C OS=Dictyostelium
discoideum GN=snrpC PE=3 SV=1
Length = 174
Score = 99 bits (245), Expect = 3e-020
Identities = 55/133 (41%), Positives = 74/133 (55%), Gaps = 15/133 (11%)
Frame = +2
Query: 41 MPRYYCDYCDTYLTHDSPSVRKQHNSGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 220
MP+YYCDYCD YLTHDSPSVRK H G +HK V+ +YQQFE + TQSLI+ R+KE+
Sbjct: 1 MPKYYCDYCDKYLTHDSPSVRKSHTVGKQHKLAVQLFYQQFEAEFTQSLIEARLKEYEES 60
Query: 221 TAAYNQVGAVFNQHMLARPRLPMMPMP---MPMGMRPPILPRPIIPGQGYMPPPGVPQ-M 388
++ +P + ++P P M + + I+P QG PPP Q M
Sbjct: 61 KG-----------RLIHQPPMGIIPTPYGQMYQQQQQQQQQQGILPFQGMQPPPHQQQGM 109
Query: 389 MAPPGGPLPPPPP 427
+ PG P+ P
Sbjct: 110 VLSPGMPIHKMQP 122
>sp|B2AWS3|PAN1_PODAN Actin cytoskeleton-regulatory complex protein PAN1
OS=Podospora anserina GN=PAN1 PE=3 SV=1
Length = 1441
Score = 71 bits (172), Expect = 8e-012
Identities = 40/92 (43%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Frame = +2
Query: 293 PMPMPMGMRPPILPRPIIPG--QGYMPPPGVPQMMAPPGGPLPPPPPQNGILRPPGLAPI 466
P+ P+ PP +P P G PPP +P M APP P PPP P +G P P
Sbjct: 1319 PVTSPVASPPPAIPSPTAAGAPPAPPPPPPMPGMGAPPPPPPPPPMPGSGAPAAPPPPPP 1378
Query: 467 PGQGGAPPPNYSGLPPPPPYHTNPAAAPPSVG 562
P GGAPPP PPPPP PA A P+ G
Sbjct: 1379 PAPGGAPPP---PPPPPPPPGGAPAPAAPAGG 1407
>sp|Q9JL04|FMN2_MOUSE Formin-2 OS=Mus musculus GN=Fmn2 PE=1 SV=2
Length = 1578
Score = 68 bits (165), Expect = 5e-011
Identities = 48/122 (39%), Positives = 60/122 (49%), Gaps = 29/122 (23%)
Frame = +2
Query: 293 PMPMP-MGMRPP-------ILPRPIIPGQGYMPPPGVPQMMAPPGGPL-----PPPPPQN 433
P P+P +G+ PP I P P +PG G PPP +P + PP PL PPPP
Sbjct: 1001 PPPLPGVGIPPPPPLPGVGIPPPPPLPGVGIPPPPPLPGVGIPPPPPLPGSGIPPPPALP 1060
Query: 434 GILRPPGLAPIPGQG---GAPPPNYSGLPPPP------PYHTNPA------AAPPSVGFN 568
G+ PP P+PG G APPP +G+PPPP P H++ AAP GF
Sbjct: 1061 GVAIPPP-PPLPGMGVPPPAPPPPGAGIPPPPLLPGSGPPHSSQVGSSTLPAAPQGCGFL 1119
Query: 569 NP 574
P
Sbjct: 1120 FP 1121
>sp|Q9T0K5|LRX3_ARATH Leucine-rich repeat extensin-like protein 3 OS=Arabidopsis
thaliana GN=LRX3 PE=1 SV=1
Length = 760
Score = 68 bits (164), Expect = 7e-011
Identities = 41/110 (37%), Positives = 47/110 (42%), Gaps = 5/110 (4%)
Frame = +2
Query: 266 LARPRLPMMPMPMPMGMRPPILPRPIIPGQGYMPPPGVPQMMAPPGGPLPPPPPQNGILR 445
L P P P P+ PP P P+ PPP P + +PP P PPPPP
Sbjct: 423 LTSPPPPSPPPPVYSPPPPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPPPPPPPPPVYSP 482
Query: 446 PPGLAPIPGQGGAPPPNYSGLPPPPPYHTNPAAAPPSVGFNNPNPGAESP 595
PP P P PPP YS PPPPP P +PP + P SP
Sbjct: 483 PPPSPPPP-----PPPVYSPPPPPPPPPPPPVYSPPPPPVYSSPPPPPSP 527
Score = 60 bits (143), Expect = 2e-008
Identities = 39/107 (36%), Positives = 45/107 (42%), Gaps = 4/107 (3%)
Frame = +2
Query: 275 PRLPMMPMPMPMGMRPPILPRPIIPGQGYMPPPGVPQMMAPPGGPLPPPPPQNGILRPPG 454
P P P P P+ PP P P P Y PPP P PP PPPP + PP
Sbjct: 468 PPPPPPPPPPPVYSPPPPSPPP-PPPPVYSPPPPPPPPPPPPVYSPPPPPVYSSPPPPPS 526
Query: 455 LAPIPGQGGAPPPNYSGLPPPPPYHTNPAAAPPSVGFNNPNPGAESP 595
AP P PPP PPPP + P P +++P P SP
Sbjct: 527 PAPTPVYCTRPPPPPPHSPPPPQFSPPP---PEPYYYSSPPPPHSSP 570
>sp|Q54WH2|FORA_DICDI Formin-A OS=Dictyostelium discoideum GN=forA PE=1 SV=1
Length = 1218
Score = 67 bits (163), Expect = 9e-011
Identities = 44/97 (45%), Positives = 47/97 (48%), Gaps = 9/97 (9%)
Frame = +2
Query: 284 PMMPMPMPM---GMRPPILPRPIIPGQGYMPPPGVPQMMAPPGGPLPPPPPQNGILRPPG 454
P P P PM G PP P P + G G PPP P M GGP PPPPP G PP
Sbjct: 664 PPPPPPPPMTGGGGPPPPPPPPPMTGGGPPPPPPPPPMTG--GGPPPPPPPPGGGPPPPP 721
Query: 455 LAPIPGQGG--APPPNYSGLPPPPP--YHTNPAAAPP 553
P GG PPP + PPPPP + AAAPP
Sbjct: 722 PPPGAKAGGPPPPPPPFGKGPPPPPGGFGMKKAAAPP 758
>sp|Q9P794|RU1C_SCHPO U1 small nuclear ribonucleoprotein C
OS=Schizosaccharomyces pombe GN=usp103 PE=1 SV=1
Length = 182
Score = 67 bits (163), Expect = 9e-011
Identities = 27/53 (50%), Positives = 37/53 (69%)
Frame = +2
Query: 41 MPRYYCDYCDTYLTHDSPSVRKQHNSGYKHKANVRTYYQQFEEQQTQSLIDQR 199
MPRY CDYC +LTHDS SVRK HN+G H NV+ YY + +++ Q +++R
Sbjct: 1 MPRYLCDYCQVWLTHDSQSVRKAHNAGRAHIQNVQDYYTKVAQEEAQKQLEER 53
>sp|Q95JC9|PRP_PIG Basic proline-rich protein OS=Sus scrofa PE=1 SV=2
Length = 676
Score = 65 bits (157), Expect = 4e-010
Identities = 49/114 (42%), Positives = 52/114 (45%), Gaps = 18/114 (15%)
Frame = +2
Query: 275 PRLPMMPMPMPMGMRPPILPRPIIPGQGYMPPPG-VPQMMAPPGGPLPPPPPQNGILRPP 451
P P P P P G RPP P P PG PPPG P PP GP PP PP G PP
Sbjct: 337 PPGPPPPGPAPPGARPP--PGPPPPGP---PPPGPAPPGARPPPGPPPPGPPPPG-PAPP 390
Query: 452 GLAPIPG--QGGAPPPNYS---GLPPPPPYHTNPAAAPPSVGFNNPNPGAESPE 598
G P PG G PPP + PPPPP P A P G P P + P+
Sbjct: 391 GARPPPGPPPPGPPPPGPAPPGARPPPPP---PPPADEPQQG---PAPSGDKPK 438
>sp|P13983|EXTN_TOBAC Extensin OS=Nicotiana tabacum GN=HRGPNT3 PE=2 SV=1
Length = 620
Score = 64 bits (153), Expect = 1e-009
Identities = 37/99 (37%), Positives = 45/99 (45%), Gaps = 6/99 (6%)
Frame = +2
Query: 299 PMPMGMRPPILPRPIIPGQGYMPPPGVPQMMAPPGGPLPPPPPQNGILRPPGLAPIPGQG 478
P P PP P+ Y PPP V +PP P PPP + PP +P P
Sbjct: 326 PPPTYSPPPPTYLPLPSSPIYSPPPPV---YSPPPPPSYSPPPPTYLPPPPPSSPPPPSF 382
Query: 479 GAPPPNYSGLPPPPPYHTNPAAAPPSVGFNNPNPGAESP 595
PPP Y PPPPP ++ P APP+ +P P SP
Sbjct: 383 SPPPPTYEQSPPPPPAYSPPLPAPPTY---SPPPPTYSP 418
Score = 57 bits (135), Expect = 2e-007
Identities = 34/96 (35%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Frame = +2
Query: 293 PMPMPMGMRPPILPRPIIPGQGYMPPPGVPQMMAPPGGPLPPPPPQNGILRPPGLAPIPG 472
P+P P PP P P Y PP +P +PP PPPP PP +P P
Sbjct: 402 PLPAPPTYSPP-PPTYSPPPPTYAQPPPLPPTYSPPPPAYSPPPPPTYSPPPPTYSPPPP 460
Query: 473 QGGAPPPNYSGLPPPPPYHTNPAAAPPSVGFNNPNP 580
PPP PPPP ++ P PPS ++ P P
Sbjct: 461 AYAQPPPPPPTYSPPPPAYSPP---PPSPIYSPPPP 493
>sp|Q84ZL0|FH5_ORYSJ Formin-like protein 5 OS=Oryza sativa subsp. japonica
GN=FH5 PE=2 SV=2
Length = 1627
Score = 62 bits (149), Expect = 4e-009
Identities = 44/104 (42%), Positives = 46/104 (44%), Gaps = 7/104 (6%)
Frame = +2
Query: 269 ARPRLPMMPMPMPMGMRPPILPRPIIPGQGYMPPPGVPQMMAPPGGPLPPPPPQNGILRP 448
ARP P P P P G RP P P G+ PPP P P PPPP G P
Sbjct: 1074 ARPGPP--PPPPPPGGRPSAPPLPPPGGRASAPPPPPPPSTRLGAPPPPPPPGAGGRAPP 1131
Query: 449 PGLAPIPGQGG-APPPNYSGLPPPPPYHTNPAAAPPSVGFNNPN 577
P AP GG PPP G PPPP P A PP G NP+
Sbjct: 1132 PPPAPGGRLGGPPPPPPPGGRAPPPP--RGPGAPPPPGG--NPS 1171
>sp|Q1DQC1|PAN1_COCIM Actin cytoskeleton-regulatory complex protein PAN1
OS=Coccidioides immitis GN=PAN1 PE=3 SV=1
Length = 1485
Score = 62 bits (149), Expect = 4e-009
Identities = 37/78 (47%), Positives = 39/78 (50%), Gaps = 18/78 (23%)
Frame = +2
Query: 320 PPILPRPIIPGQGYMPPPGVPQMMAPPGGPLPPPPPQNGILRPPGLAPIPGQGGAPPPNY 499
PP +P P PPP +P M A G P PPPPP PPG AP P GGAPPP
Sbjct: 1389 PPSIPPP--------PPPPMPGMEASAGAPPPPPPP------PPGDAP-PPPGGAPPPPP 1433
Query: 500 SGLPPPPPYHTNPAAAPP 553
PPPP PA PP
Sbjct: 1434 G---PPPPAPPGPAPGPP 1448
>sp|Q7SAT8|PAN1_NEUCR Actin cytoskeleton-regulatory complex protein pan-1
OS=Neurospora crassa GN=pan-1 PE=3 SV=1
Length = 1533
Score = 60 bits (143), Expect = 2e-008
Identities = 40/108 (37%), Positives = 46/108 (42%), Gaps = 18/108 (16%)
Frame = +2
Query: 290 MPMPMPM---GMRPPILPRPIIPGQGYMPPPGVPQMMAPPGGPLPPPPPQNGILRPPGLA 460
M P P+ G +P P++ PPP P + P G PPPPP PPG
Sbjct: 1387 MAPPRPLSATGEKPTASTPPVVSSPSSPPPPPAP--VEPSAGSPPPPPPP-----PPGPP 1439
Query: 461 PIPGQGGAPPPNYSGLPPPPPYHTNPAAA---PPSVGFNNPNPGAESP 595
P P G PPP PPPPP + A A PP P PGA P
Sbjct: 1440 PAPSGGAPPPP-----PPPPPMPESGAPAAPPPPPPPGPPPAPGAVPP 1482
>sp|Q0GNC1|INF2_MOUSE Inverted formin-2 OS=Mus musculus GN=Inf2 PE=1 SV=1
Length = 1273
Score = 57 bits (137), Expect = 9e-008
Identities = 35/97 (36%), Positives = 44/97 (45%), Gaps = 16/97 (16%)
Frame = +2
Query: 290 MPMPM-PMGMRPPILPRPIIPGQGYMPPPGVPQMMAPPGGPLPPPPPQNGILRPPG---- 454
+P+P P+ P+LP P +P PG + PP PLPPP P +G PP
Sbjct: 420 LPLPTPPLSSSTPVLP----PTPPPLPGPGATSPLPPPPPPLPPPLPGSGTTSPPPPPPP 475
Query: 455 ----LAPIPGQGGAPPPNYSGLPPPPPYHTNPAAAPP 553
P+PG G PP PPPPP A +PP
Sbjct: 476 PPPLPPPLPGSGTISPP---PPPPPPPLPGTGAVSPP 509
>sp|Q9FPQ6|GP1_CHLRE Vegetative cell wall protein gp1 OS=Chlamydomonas
reinhardtii GN=GP1 PE=2 SV=1
Length = 555
Score = 57 bits (136), Expect = 1e-007
Identities = 39/112 (34%), Positives = 46/112 (41%), Gaps = 9/112 (8%)
Frame = +2
Query: 275 PRLPMMPMPMPMGMRPPILPRPIIP-GQGYMPPPGVPQMMAPPGGPLP----PPPPQNGI 439
P P+ P P P PP+ P P P PP P +PP P P P PP
Sbjct: 142 PAPPLPPSPAPPSPSPPVPPSPSPPVPPSPAPPSPTPPSPSPPVPPSPAPPSPAPPVPPS 201
Query: 440 LRPPGLAPIPGQGGAPPPNYSGLPPPPPYHTNPAAAPPSVGFNNPNPGAESP 595
PP AP APP S PP PP P+ +PP+ P+P SP
Sbjct: 202 PAPPSPAPPVPPSPAPPSPPSPAPPSPPSPAPPSPSPPA----PPSPVPPSP 249
>sp|Q0ULF5|SEC31_PHANO Protein transport protein SEC31 OS=Phaeosphaeria nodorum
GN=SEC31 PE=3 SV=3
Length = 1256
Score = 57 bits (136), Expect = 1e-007
Identities = 32/77 (41%), Positives = 35/77 (45%), Gaps = 8/77 (10%)
Frame = +2
Query: 353 QGYMPPPGVPQMMAPPGGPLPPPPPQNGILRPPGLAPIPGQGGAPPPNYSGLPPPPPYHT 532
Q Y PP G P P PPPPP+ PP + P Q G PPN P PY
Sbjct: 933 QNYGPPGGASPGFPPQSRPTPPPPPKGPPQGPPRMTSPPSQAGGAPPN-----APNPYAP 987
Query: 533 NPAA---APPSVGFNNP 574
+PAA APP GF P
Sbjct: 988 SPAANNYAPPPSGFAPP 1004
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,851,905,190
Number of Sequences: 518415
Number of Extensions: 48851905190
Number of Successful Extensions: 346316827
Number of sequences better than 0.0: 0
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