BLASTX 7.6.2
Query= UN11956 /QuerySize=766
(765 letters)
Database: UniProt/TrEMBL;
11,397,958 sequences; 3,661,877,547 total letters
Score E
Sequences producing significant alignments: (bits) Value
tr|Q56XE4|Q56XE4_ARATH Putative C-type U1 snRNP OS=Arabidopsis t... 345 4e-093
tr|Q84VV2|Q84VV2_ARATH At4g03120 OS=Arabidopsis thaliana GN=At4g... 343 2e-092
tr|B9GWP7|B9GWP7_POPTR Predicted protein OS=Populus trichocarpa ... 236 2e-060
tr|A2X383|A2X383_ORYSI Putative uncharacterized protein OS=Oryza... 214 1e-053
tr|C5XZK6|C5XZK6_SORBI Putative uncharacterized protein Sb04g009... 210 2e-052
tr|B4FBY0|B4FBY0_MAIZE Putative uncharacterized protein OS=Zea m... 204 1e-050
tr|Q9ZR19|Q9ZR19_ARATH Putative C-type U1 snRNP OS=Arabidopsis t... 201 6e-050
tr|B9S3X9|B9S3X9_RICCO U1 small nuclear ribonucleoprotein C, put... 198 6e-049
tr|Q6ETX3|Q6ETX3_ORYSJ Os02g0266100 protein OS=Oryza sativa subs... 198 6e-049
tr|Q53U41|Q53U41_SOLLC Similar to u1 small nuclear ribonucleopro... 198 8e-049
tr|D5A7U4|D5A7U4_PICSI Putative uncharacterized protein OS=Picea... 192 4e-047
tr|C5XYW4|C5XYW4_SORBI Putative uncharacterized protein Sb04g028... 192 5e-047
tr|C0HE38|C0HE38_MAIZE Putative uncharacterized protein OS=Zea m... 168 7e-040
tr|A9T2K5|A9T2K5_PHYPA Predicted protein OS=Physcomitrella paten... 154 1e-035
tr|P90815|P90815_CAEEL U1 small nuclear ribonucleoprotein C OS=C... 115 6e-024
tr|Q5TAL4|Q5TAL4_HUMAN U1 small nuclear ribonucleoprotein C OS=H... 114 2e-023
tr|A8XW44|A8XW44_CAEBR U1 small nuclear ribonucleoprotein C OS=C... 113 3e-023
tr|D3ZCL3|D3ZCL3_RAT Putative uncharacterized protein Snrpc OS=R... 113 3e-023
tr|Q569X3|Q569X3_MOUSE U1 small nuclear ribonucleoprotein C OS=M... 113 3e-023
tr|C3Z1P5|C3Z1P5_BRAFL Putative uncharacterized protein OS=Branc... 111 1e-022
>tr|Q56XE4|Q56XE4_ARATH Putative C-type U1 snRNP OS=Arabidopsis thaliana
GN=At4g03120 PE=1 SV=1
Length = 207
Score = 345 bits (883), Expect = 4e-093
Identities = 167/209 (79%), Positives = 174/209 (83%), Gaps = 22/209 (10%)
Frame = +2
Query: 41 MPRYYCDYCDTYLTHDSPSVRKQHNSGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 220
MPRYYCDYCDTYLTHDSPSVRKQHN+GYKHKANVR YYQQFEEQQTQSLIDQRIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 221 TAAYNQVGAVFNQHMLARPRLPMM--PMPMPMGMRPPILPRPIIPGQGYMPPPGVPQMMA 394
T Y QVGAVFNQHMLARPR PMM P MPMGMRPP+LPRP++P QGYMPPPGVPQMMA
Sbjct: 61 TGGYQQVGAVFNQHMLARPRPPMMLPPGSMPMGMRPPVLPRPMMPPQGYMPPPGVPQMMA 120
Query: 395 PPGGPLPPPPPQNGILR-------------PPGLAPIPGQGGAPPPNYSGLPPPPPYHTN 535
PPG PL PPPPQNGILR PPG+APIPGQGG PPPNY+GLPPPPPYHTN
Sbjct: 121 PPGAPL-PPPPQNGILRPPGMAPIPGQGGGPPGMAPIPGQGGGPPPNYNGLPPPPPYHTN 179
Query: 536 PAAAPPSVGF-----NNPNPGAESPETNE 607
P AAPPS F NNPNP AESPE+NE
Sbjct: 180 P-AAPPSGNFNNPNLNNPNPSAESPESNE 207
>tr|Q84VV2|Q84VV2_ARATH At4g03120 OS=Arabidopsis thaliana GN=At4g03120 PE=2
SV=1
Length = 207
Score = 343 bits (878), Expect = 2e-092
Identities = 166/209 (79%), Positives = 174/209 (83%), Gaps = 22/209 (10%)
Frame = +2
Query: 41 MPRYYCDYCDTYLTHDSPSVRKQHNSGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 220
MPRYYCDYCDTYLTHDSPSVRKQHN+GYKHKANVR Y+QQFEEQQTQSLIDQRIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYHQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 221 TAAYNQVGAVFNQHMLARPRLPMM--PMPMPMGMRPPILPRPIIPGQGYMPPPGVPQMMA 394
T Y QVGAVFNQHMLARPR PMM P MPMGMRPP+LPRP++P QGYMPPPGVPQMMA
Sbjct: 61 TGGYQQVGAVFNQHMLARPRPPMMLPPGSMPMGMRPPVLPRPMMPPQGYMPPPGVPQMMA 120
Query: 395 PPGGPLPPPPPQNGILR-------------PPGLAPIPGQGGAPPPNYSGLPPPPPYHTN 535
PPG PL PPPPQNGILR PPG+APIPGQGG PPPNY+GLPPPPPYHTN
Sbjct: 121 PPGAPL-PPPPQNGILRPPGMAPIPGQGGGPPGMAPIPGQGGGPPPNYNGLPPPPPYHTN 179
Query: 536 PAAAPPSVGF-----NNPNPGAESPETNE 607
P AAPPS F NNPNP AESPE+NE
Sbjct: 180 P-AAPPSGNFNNPNLNNPNPSAESPESNE 207
>tr|B9GWP7|B9GWP7_POPTR Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_712203 PE=4 SV=1
Length = 202
Score = 236 bits (602), Expect = 2e-060
Identities = 128/205 (62%), Positives = 144/205 (70%), Gaps = 21/205 (10%)
Frame = +2
Query: 41 MPRYYCDYCDTYLTHDSPSVRKQHNSGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 220
MPRYYCDYCDTYLTHDSPSVRKQHN+GYKHKANVR YYQQFEEQQTQS+IDQRIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSIIDQRIKEHLGQ 60
Query: 221 TAAYNQVGAVFNQH-MLARPRLPMMPMP-MPM---------GMRPPILPRPIIPGQGYMP 367
TAA+ QVGA +NQH M+ RPRLP++P P MP+ GMRPP+LPRP+ GYM
Sbjct: 61 TAAFQQVGAAYNQHLMVQRPRLPVLPTPVMPIGGNNAPLFPGMRPPVLPRPMPGAPGYMN 120
Query: 368 PPGVPQMMAPPGGPLPPPPPQNGILRPPGLAP---IPGQGGAPPPNYSGLP---PPPPYH 529
PP +P MMAPPG P P NGI RPP + +PG AP P SG P PP Y
Sbjct: 121 PPMMPPMMAPPGAP-SLPGQMNGIPRPPTMIAQPNVPGSTAAPTP--SGPPSMGPPVTYQ 177
Query: 530 TNPAAAPPSVGFNNPNPGAESPETN 604
N AA S GF++ N A +PE N
Sbjct: 178 ANQAAT-TSGGFDSFNVNAAAPEAN 201
>tr|A2X383|A2X383_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp.
indica GN=OsI_06664 PE=4 SV=1
Length = 238
Score = 214 bits (543), Expect = 1e-053
Identities = 134/247 (54%), Positives = 145/247 (58%), Gaps = 69/247 (27%)
Frame = +2
Query: 41 MPRYYCDYCDTYLTHDSPSVRKQHNSGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 220
MPRYYCDYCDTYLTHDSPSVRKQHN+GYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 221 TAAYNQVGAVFNQHMLA------RPRLPMMPMP-MPM------------GMRPPILPRPI 343
AA+ QVGA FNQH+L+ RPRLP++P P MP+ G+RPPILP P
Sbjct: 61 AAAF-QVGAPFNQHLLSFPGGVPRPRLPILPTPGMPLGVPQVPGAPLMPGVRPPILPAPG 119
Query: 344 IPGQ--------GYMPPPGVPQMM---APPG----GPLPP----------------PPPQ 430
IPGQ GY P VP M APPG G +PP PPP
Sbjct: 120 IPGQIQKQQCVKGYPGAPNVPTMPQTGAPPGSMPPGSMPPGSMPMQMAPLPRPPTLPPPT 179
Query: 431 NGILRPPGLAPIPGQGGAPPPNYSGLPP---------PPPYHTNPAAAPPSVGFNNPNPG 583
+G PG APIP GAPP Y PP PPP P AAPP F+ P
Sbjct: 180 SG---APG-APIP-NSGAPPAMYQTNPPQPAGPTSGAPPPVAAPPPAAPPQAPFSYAQP- 233
Query: 584 AESPETN 604
PE N
Sbjct: 234 ---PEGN 237
>tr|C5XZK6|C5XZK6_SORBI Putative uncharacterized protein Sb04g009880 OS=Sorghum
bicolor GN=Sb04g009880 PE=4 SV=1
Length = 231
Score = 210 bits (532), Expect = 2e-052
Identities = 127/224 (56%), Positives = 138/224 (61%), Gaps = 44/224 (19%)
Frame = +2
Query: 41 MPRYYCDYCDTYLTHDSPSVRKQHNSGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 220
MPRYYCDYCDTYLTHDSPSVRKQHN+GYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 221 TAAYNQVGAVFNQHML------ARPRLPMMPMP-MP------------MGMRPPILPRPI 343
AA+ Q GA FNQHML ARPRLP++P P MP G+RPPILP P
Sbjct: 61 AAAF-QAGAPFNQHMLTFPGAVARPRLPILPTPGMPHGFPQAPGAPLMPGVRPPILPAPG 119
Query: 344 IPG---------QGYMPPPGVPQMMAPPGG-PLPPPPPQNGILRPPGLAPIPGQGGAPPP 493
IPG Q PP +PQ APPG P P PP + P +AP+P PPP
Sbjct: 120 IPGYPGGPPTMLQPGAPPGSMPQPGAPPGSMPQPGAPPGS---MPMQMAPLPRPPTLPPP 176
Query: 494 NYSGLP---------PPPPYHTN-PAAAPPSVGFNNPNPGAESP 595
SG+P PP Y TN PA A P+ G P A P
Sbjct: 177 T-SGVPGAPIPNSAAPPAIYQTNPPAPAGPTSGAPPAPPTAPQP 219
>tr|B4FBY0|B4FBY0_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1
Length = 228
Score = 204 bits (517), Expect = 1e-050
Identities = 119/208 (57%), Positives = 133/208 (63%), Gaps = 34/208 (16%)
Frame = +2
Query: 41 MPRYYCDYCDTYLTHDSPSVRKQHNSGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 220
MPRYYCDYCDTYLTHDSPSVRKQHN+GYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 221 TAAYNQVGAVFNQHML------ARPRLPMMPMP-MP------------MGMRPPILPRPI 343
AA+ Q GA FNQH+L ARPRLP++P P MP G+RPPILP P
Sbjct: 61 AAAF-QAGAPFNQHLLAFPGAMARPRLPILPTPGMPHGFPQAPGAPLMPGIRPPILPAPG 119
Query: 344 IPG------QGYMPPPGVPQMMAPPGG-PLPPPPPQNGILRPPGLAPIPGQGGAPPPNYS 502
PG Q PP +PQ APPG P P PP + P +AP+P PPP S
Sbjct: 120 YPGPPPTMQQPGAPPGSMPQPGAPPGSMPQPGAPPGS---MPMQMAPLPRPPTLPPPT-S 175
Query: 503 GLPPPPPYHTNPAAAPPSVGFNNPNPGA 586
G+P P + APP++ NP A
Sbjct: 176 GVPGAP---IPNSGAPPAIYQANPQASA 200
>tr|Q9ZR19|Q9ZR19_ARATH Putative C-type U1 snRNP OS=Arabidopsis thaliana
GN=F4C21.4 PE=2 SV=1
Length = 112
Score = 201 bits (511), Expect = 6e-050
Identities = 94/108 (87%), Positives = 98/108 (90%), Gaps = 2/108 (1%)
Frame = +2
Query: 41 MPRYYCDYCDTYLTHDSPSVRKQHNSGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 220
MPRYYCDYCDTYLTHDSPSVRKQHN+GYKHKANVR YYQQFEEQQTQSLIDQRIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 221 TAAYNQVGAVFNQHMLARPRLPMM--PMPMPMGMRPPILPRPIIPGQG 358
T Y QVGAVFNQHMLARPR PMM P MPMGMRPP+LPRP++P QG
Sbjct: 61 TGGYQQVGAVFNQHMLARPRPPMMLPPGSMPMGMRPPVLPRPMMPPQG 108
>tr|B9S3X9|B9S3X9_RICCO U1 small nuclear ribonucleoprotein C, putative
OS=Ricinus communis GN=RCOM_0556840 PE=4 SV=1
Length = 206
Score = 198 bits (502), Expect = 6e-049
Identities = 107/177 (60%), Positives = 125/177 (70%), Gaps = 12/177 (6%)
Frame = +2
Query: 41 MPRYYCDYCDTYLTHDSPSVRKQHNSGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 220
MPRYYCDYCDTYLTHDSPSVRKQHN+GYKHKANVR+YYQQFEEQQTQSLIDQRIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 221 TAAYNQVGAVFNQHMLARPRLPMMP---MPMPMGMRPPILPRPIIPGQGYMPPPGVPQ-M 388
AA+ QVGA +NQH+L RPRLP++P MP+P + P P++P G PPP +P+ +
Sbjct: 61 AAAFQQVGAAYNQHLLQRPRLPVLPTPMMPIPGSAQLP-ANTPLMP--GIRPPPVLPRPV 117
Query: 389 MAPPGGPLPPPPPQNGILRPPGLAPIPGQ-GGAPPPNYSGLPPPPPYHTNPAAAPPS 556
A PG P P ++ PPG +PGQ G P P S PP + A APPS
Sbjct: 118 PAAPGYMSSPAMPP--MVAPPGAPSLPGQVNGLPRPPMS--IPPATVPGSAAVAPPS 170
>tr|Q6ETX3|Q6ETX3_ORYSJ Os02g0266100 protein OS=Oryza sativa subsp. japonica
GN=P0006C08.31 PE=2 SV=1
Length = 228
Score = 198 bits (502), Expect = 6e-049
Identities = 114/193 (59%), Positives = 130/193 (67%), Gaps = 22/193 (11%)
Frame = +2
Query: 41 MPRYYCDYCDTYLTHDSPSVRKQHNSGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 220
MPRYYCDYCDTYLTHDSPSVRKQHN+GYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 221 TAAYNQVGAVFNQHMLA------RPRLPMMPMP-MPMGMRPPILPRPIIPG--QGYMPPP 373
AA+ QVGA FNQH+L+ RPRLP++P P MP+G+ P + P++PG +P P
Sbjct: 61 AAAF-QVGAPFNQHLLSFPGGVPRPRLPILPTPGMPLGV-PQVPGAPLMPGVRPPILPAP 118
Query: 374 GVPQMMAPPGGPLPPPPPQNGILRPPGLAPIPGQ--GGAPPPNYSGLPPPPPYHTNPAAA 547
G+P PG P P PQ G PPG P PG G+ P + LP PP + A
Sbjct: 119 GIP---GYPGAPNVPTMPQTG--APPGSMP-PGSMPPGSMPMQMAPLPRPPTLPPPTSGA 172
Query: 548 PPSVGFNNPNPGA 586
P G PN GA
Sbjct: 173 P---GAPIPNSGA 182
>tr|Q53U41|Q53U41_SOLLC Similar to u1 small nuclear ribonucleoprotein C
OS=Solanum lycopersicum PE=2 SV=1
Length = 197
Score = 198 bits (501), Expect = 8e-049
Identities = 107/205 (52%), Positives = 129/205 (62%), Gaps = 24/205 (11%)
Frame = +2
Query: 41 MPRYYCDYCDTYLTHDSPSVRKQHNSGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 220
MPRYYCDYCDTYLTHDSPSVRKQHN+GYKHK NVRTYYQQFE Q QSLIDQ++KEHLG
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKGNVRTYYQQFEAQLNQSLIDQKVKEHLG- 59
Query: 221 TAAYNQVGAVFNQHMLARPRLPMMPMPMP------------MGMRPPILPRPIIPGQGYM 364
A+ VG F Q P LP PM MP GMRPP+LPRP+ GY
Sbjct: 60 --AFRPVGLPFPQLRPGLPGLPTPPMQMPGNPQMPAGAQWVPGMRPPVLPRPMPGLPGYA 117
Query: 365 PPPGVPQMMAPPGGPLPPPPPQNGILRPPG-LAPIPGQGGAPPPNYSGLPP---PPPYHT 532
PPP +PQM+APPG P+ P N + RP G + +PG G P P +G PP PPP +
Sbjct: 118 PPP-MPQMLAPPGAPM--PGQVNNMQRPAGPPSAVPGSMGMPAP--TGGPPMFAPPPVYQ 172
Query: 533 NPAAAPPSVGFNNPNPGAESPETNE 607
P + G +N + A++ ++N+
Sbjct: 173 GSTTVPTTGGVDNSSTNAQAADSNQ 197
>tr|D5A7U4|D5A7U4_PICSI Putative uncharacterized protein OS=Picea sitchensis
PE=2 SV=1
Length = 244
Score = 192 bits (487), Expect = 4e-047
Identities = 107/202 (52%), Positives = 123/202 (60%), Gaps = 26/202 (12%)
Frame = +2
Query: 41 MPRYYCDYCDTYLTHDSPSVRKQHNSGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 220
MPRYYCDYCDTYLTHDSPSVRKQHN+GYKHKANVR YYQQFEEQQTQSLIDQR+KEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRAYYQQFEEQQTQSLIDQRVKEHLGQ 60
Query: 221 TAAY-NQVGAVFNQHMLA------RPRLPMMPMP---------MPMG------MRPPILP 334
TAA+ QVGA F QH+ + RPR+PM+P P +P G +RPPIL
Sbjct: 61 TAAFQQQVGAAFQQHLASMQAGQQRPRIPMLPPPTLPVPGSTQLPNGLSMLPTLRPPILT 120
Query: 335 RPIIPGQGYMPPPGVPQMMAPPGGPLPPPP---PQNGILRPPGLAPIPGQGGAPPPNYSG 505
RP + GY G M+ PPG + PP NG RPP L P P G +
Sbjct: 121 RPTLIPPGYGVSVGTSPMIRPPGAAVTSPPGVAQSNGWPRPPTLTP-PVSTGVTASTATS 179
Query: 506 LPPPPPYHTNPAAAPPSVGFNN 571
P +NP + PS + N
Sbjct: 180 SPMSNVLMSNPPISGPSGTYQN 201
>tr|C5XYW4|C5XYW4_SORBI Putative uncharacterized protein Sb04g028260 OS=Sorghum
bicolor GN=Sb04g028260 PE=4 SV=1
Length = 228
Score = 192 bits (486), Expect = 5e-047
Identities = 116/202 (57%), Positives = 126/202 (62%), Gaps = 32/202 (15%)
Frame = +2
Query: 41 MPRYYCDYCDTYLTHDSPSVRKQHNSGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 220
MPRYYCDYCDTYLTHDSPSVRKQHN+GYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 221 TAAYNQVGAVFNQHML------ARPRLPMMPMPMPMGMRPPILPRPIIPG--QGYMPPPG 376
AA+ Q GA FNQHML ARPRLP++P P GM P++PG +P PG
Sbjct: 61 AAAF-QAGAPFNQHMLAFPGAVARPRLPILPTP---GMPHGFPQAPLMPGVRPPILPAPG 116
Query: 377 VPQMMAPPGGPLPPPPPQNGILRPPGLAPIPG-------QGGAPPPNYSGLPPPPPYHTN 535
VP PG PP PQ G PPG P PG Q GAPP + P P
Sbjct: 117 VP---GYPGA--PPTMPQPG--APPGSMPQPGAPPGSMPQPGAPPGSMPMQMAPLP--RP 167
Query: 536 PAAAPPSVGFNNPNPGAESPET 601
P PP+ G PGA P +
Sbjct: 168 PTLPPPTSGV----PGAPIPNS 185
>tr|C0HE38|C0HE38_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1
Length = 129
Score = 168 bits (424), Expect = 7e-040
Identities = 87/121 (71%), Positives = 95/121 (78%), Gaps = 11/121 (9%)
Frame = +2
Query: 41 MPRYYCDYCDTYLTHDSPSVRKQHNSGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 220
MPRYYCDYCDTYLTHDSPSVRKQHN+GYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 221 TAAYNQVGAVFNQHML------ARPRLPMMPMP-MPMGMRPPILPRPIIPG--QGYMPPP 373
AA+ Q GA FNQH+L ARPRLP++P P MP G P P++PG +P P
Sbjct: 61 AAAF-QAGAPFNQHLLAFPGAMARPRLPILPTPGMPHGF-PQAPGAPLMPGIRPPILPAP 118
Query: 374 G 376
G
Sbjct: 119 G 119
>tr|A9T2K5|A9T2K5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_167707 PE=4 SV=1
Length = 309
Score = 154 bits (387), Expect = 1e-035
Identities = 92/187 (49%), Positives = 108/187 (57%), Gaps = 12/187 (6%)
Frame = +2
Query: 41 MPRYYCDYCDTYLTHDSPSVRKQHNSGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 220
MPRYYCDYCDT+LTHDSPSVRKQH +GYKHKANVR YYQQFEEQQTQSLIDQ++KEHLGQ
Sbjct: 1 MPRYYCDYCDTHLTHDSPSVRKQHCAGYKHKANVRQYYQQFEEQQTQSLIDQKVKEHLGQ 60
Query: 221 TA---AYNQVGAVFNQHMLARPRLPMMPMPMPMGMRPPILPRPIIPGQGYMPPPGVPQMM 391
TA A QVG H LA PM P +RPP+L P +PPP P
Sbjct: 61 TAAALAQQQVGGAVYSH-LATLGGGYKPMAAPGLLRPPVLAAVRPP---VLPPPSGPSSG 116
Query: 392 APPGGPLPPPPPQNGILRPPGLAPIPGQGGAPPPNYSGLPPPPPYHTNPAAAPPSVGFNN 571
G PP ++ PPG + P YS P Y N + P S +++
Sbjct: 117 YGSGALPSYRPP---VVPPPGGSSNQYYNNNGPSQYSTSNGAPQYSVNNSLVPQS--YSS 171
Query: 572 PNPGAES 592
+ GA+S
Sbjct: 172 SSSGAQS 178
>tr|P90815|P90815_CAEEL U1 small nuclear ribonucleoprotein C OS=Caenorhabditis
elegans GN=F08B4.7 PE=2 SV=1
Length = 142
Score = 115 bits (287), Expect = 6e-024
Identities = 69/146 (47%), Positives = 83/146 (56%), Gaps = 19/146 (13%)
Frame = +2
Query: 41 MPRYYCDYCDTYLTHDSPSVRKQHNSGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 220
MP+YYCDYCDT+LTHDSPSVRK HN G KHK NVR +YQ++ E Q Q L+DQ +
Sbjct: 1 MPKYYCDYCDTFLTHDSPSVRKTHNGGRKHKDNVRMFYQKWMEDQAQKLVDQTARAF--- 57
Query: 221 TAAYNQVGAVFNQHMLARPRLPMMPMPM---PMGMRPPILPRPII-PGQGYMPPPGVPQM 388
A GAV M P P+ PM P GM P + PRP PG G+ PG P M
Sbjct: 58 -ATNRMQGAVPRTTMGMAPVPPVGHHPMMGGPPGM-PMMAPRPFPGPGVGF---PGAPGM 112
Query: 389 MAPPGGPLPPPPPQNGILRPPGLAPI 466
PGGP+ G+ PPG+ P+
Sbjct: 113 PPFPGGPM-------GMAGPPGMPPM 131
>tr|Q5TAL4|Q5TAL4_HUMAN U1 small nuclear ribonucleoprotein C OS=Homo sapiens
GN=SNRPC PE=2 SV=1
Length = 159
Score = 114 bits (283), Expect = 2e-023
Identities = 67/151 (44%), Positives = 84/151 (55%), Gaps = 16/151 (10%)
Frame = +2
Query: 41 MPRYYCDYCDTYLTHDSPSVRKQHNSGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 220
MP++YCDYCDTYLTHDSPSVRK H SG KHK NV+ YYQ++ E+Q QSLID+
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------T 53
Query: 221 TAAYNQVGAVFNQHMLARPRLPMMPMP--MPMGMRPPILPRPIIPGQGYMPPPGVPQMMA 394
TAA+ Q P M+P P +P RP ++P P + G PP +P M
Sbjct: 54 TAAFQQGKIPPTPFSAPPPAGAMIPPPPSLPGPPRPGMMPAPHMGG-----PPMMPMMGP 108
Query: 395 PPGGPLPPPPPQNGILRPPGLAPIPGQGGAP 487
PP G +P P +RPP +P G P
Sbjct: 109 PPPGMMPVGPAPG--MRPPMGGHMPMMPGPP 137
>tr|A8XW44|A8XW44_CAEBR U1 small nuclear ribonucleoprotein C OS=Caenorhabditis
briggsae GN=CBG19656 PE=3 SV=1
Length = 142
Score = 113 bits (281), Expect = 3e-023
Identities = 70/145 (48%), Positives = 82/145 (56%), Gaps = 17/145 (11%)
Frame = +2
Query: 41 MPRYYCDYCDTYLTHDSPSVRKQHNSGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 220
MP+YYCDYCDT+LTHDSPSVRK HN G KHK NVR +YQ++ E Q Q L+DQ +
Sbjct: 1 MPKYYCDYCDTFLTHDSPSVRKTHNGGRKHKDNVRMFYQKWMEDQAQKLVDQTARAF--- 57
Query: 221 TAAYNQVGAVFNQHMLARPRLPMMPMPM---PMGMRPPILPRPIIPGQGYMPPPGVPQMM 391
A GAV M P P+ PM P GM P + PRP PG PP G P
Sbjct: 58 -ATNRMHGAVPRTTMGMAPVPPVGHHPMMGGPPGM-PMMAPRP-FPG----PPVGFPG-- 108
Query: 392 APPGGPLPPPPPQNGILRPPGLAPI 466
AP P P PP G+ PPG+ P+
Sbjct: 109 APGLAPFPGPP--MGLAGPPGMPPM 131
>tr|D3ZCL3|D3ZCL3_RAT Putative uncharacterized protein Snrpc OS=Rattus
norvegicus GN=Snrpc PE=4 SV=1
Length = 159
Score = 113 bits (281), Expect = 3e-023
Identities = 67/151 (44%), Positives = 84/151 (55%), Gaps = 16/151 (10%)
Frame = +2
Query: 41 MPRYYCDYCDTYLTHDSPSVRKQHNSGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 220
MP++YCDYCDTYLTHDSPSVRK H SG KHK NV+ YYQ++ E+Q QSLID+
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------T 53
Query: 221 TAAYNQVGAVFNQHMLARPRLPMMPMP--MPMGMRPPILPRPIIPGQGYMPPPGVPQMMA 394
TAA+ Q P M+P P +P RP ++P P + G PP +P M
Sbjct: 54 TAAFQQGKIPPAPFSAPPPAGAMIPPPPSLPGPPRPGMMPAPHMGG-----PPMMPMMGP 108
Query: 395 PPGGPLPPPPPQNGILRPPGLAPIPGQGGAP 487
PP G +P P +RPP +P G P
Sbjct: 109 PPPGMMPVGPAPG--MRPPMGGHMPMMPGPP 137
>tr|Q569X3|Q569X3_MOUSE U1 small nuclear ribonucleoprotein C OS=Mus musculus
GN=Snrpc PE=2 SV=1
Length = 159
Score = 113 bits (281), Expect = 3e-023
Identities = 67/151 (44%), Positives = 84/151 (55%), Gaps = 16/151 (10%)
Frame = +2
Query: 41 MPRYYCDYCDTYLTHDSPSVRKQHNSGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 220
MP++YCDYCDTYLTHDSPSVRK H SG KHK NV+ YYQ++ E+Q QSLID+
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------T 53
Query: 221 TAAYNQVGAVFNQHMLARPRLPMMPMP--MPMGMRPPILPRPIIPGQGYMPPPGVPQMMA 394
TAA+ Q P M+P P +P RP ++P P + G PP +P M
Sbjct: 54 TAAFQQGKIPPAPFSAPPPAGAMIPPPPSLPGPPRPGMMPAPHMGG-----PPMMPMMGP 108
Query: 395 PPGGPLPPPPPQNGILRPPGLAPIPGQGGAP 487
PP G +P P +RPP +P G P
Sbjct: 109 PPPGMMPVGPAPG--MRPPMGGHMPMMPGPP 137
>tr|C3Z1P5|C3Z1P5_BRAFL Putative uncharacterized protein OS=Branchiostoma
floridae GN=BRAFLDRAFT_69314 PE=4 SV=1
Length = 221
Score = 111 bits (275), Expect = 1e-022
Identities = 76/187 (40%), Positives = 90/187 (48%), Gaps = 43/187 (22%)
Frame = +2
Query: 41 MPRYYCDYCDTYLTHDSPSVRKQHNSGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 220
MP+Y+CDYCDTYLTHDSPSVRK H +G KHK NVR YYQ++ E+Q Q LID Q
Sbjct: 1 MPKYFCDYCDTYLTHDSPSVRKTHCNGRKHKENVRVYYQKWMEEQAQQLID--------Q 52
Query: 221 TAAYNQVGAVFNQHMLARPRLPMMPMPMPMG---------MRPPILPRPIIPGQGYMPPP 373
T A Q G ++P P P G + PP + + G +
Sbjct: 53 TTAAFQAG-----------KIPNNPFPNAAGQVGNEPGAKVLPPAILQAAAFQAGKIASN 101
Query: 374 GVPQMMAPP----GGPLPPPPPQNGILRPPGLAPIPGQGGAP-PPNYSG--LPPPPPYHT 532
P A P GG + PPPP L+ PG G G AP PP G L PPP
Sbjct: 102 PFPTSQAGPGPQGGGTMIPPPPS---LQGPG-----GPGSAPAPPRMPGPLLMTPPPGAA 153
Query: 533 NPAAAPP 553
P APP
Sbjct: 154 APGMAPP 160
Database: UniProt/TrEMBL
Posted date: Sat Aug 07 14:51:12 2010
Number of letters in database: 3,661,877,547
Number of sequences in database: 11,397,958
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 962,773,219,642
Number of Sequences: 11397958
Number of Extensions: 962773219642
Number of Successful Extensions: 390716400
Number of sequences better than 0.0: 0
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