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TAIR blast output of UN11988


BLASTX 7.6.2

Query= UN11988 /QuerySize=1127
        (1126 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT3G47860.1 | Symbols:  | apolipoprotein D-relate...    306   2e-083

>TAIR9_protein||AT3G47860.1 | Symbols:  | apolipoprotein D-related |
        chr3:17656778-17658269 REVERSE

          Length = 354

 Score =  306 bits (782), Expect = 2e-083
 Identities = 169/235 (71%), Positives = 186/235 (79%), Gaps = 15/235 (6%)
 Frame = -3

Query: 1103 IITSLSTTLVLP---QSFTRPA--NTRRSFAVKRINSRSHNSKGSLKKSTVKCSLENPIE 939
            I+ S S +L  P   QSF+ PA  +TRRS +   +     +S+  LK   +KCSLEN  E
Sbjct:    2 ILLSSSISLSRPVSSQSFSPPAATSTRRSHSSVTVKC-CCSSRRLLKNPELKCSLENLFE 60

Query:  938 SKETLRKHFVAGFATILLLSQAGQGVALD-----HNICQLGS-AAVEENKPTLPLDSDPE 777
              + LRK FV+GFA ILLLSQAGQG+ALD      NICQLGS AAV ENK TLP D D E
Sbjct:   61 I-QALRKCFVSGFAAILLLSQAGQGIALDLSSGYQNICQLGSAAAVGENKLTLPSDGDSE 119

Query:  776 EMMMMMMKGMTAKNFDPVRYSGRWFEVASLKRGFAGQGQEDCHCTQGVYTFDMKEPAIRV 597
             MMMMMM+GMTAKNFDPVRYSGRWFEVASLKRGFAGQGQEDCHCTQGVYTFDMKE AIRV
Sbjct:  120 SMMMMMMRGMTAKNFDPVRYSGRWFEVASLKRGFAGQGQEDCHCTQGVYTFDMKESAIRV 179

Query:  596 DTFCVHGSPDGYITGIRGKVQCVRAQDLEKTETDLEKQEMIKEKCYLRFP--PFL 438
            DTFCVHGSPDGYITGIRGKVQCV A+DLEK+ETDLEKQEMIKEKC+LRFP  PF+
Sbjct:  180 DTFCVHGSPDGYITGIRGKVQCVGAEDLEKSETDLEKQEMIKEKCFLRFPTIPFI 234


 Score =  131 bits (327), Expect = 1e-030
 Identities = 64/72 (88%), Positives = 66/72 (91%), Gaps = 1/72 (1%)
 Frame = -3

Query: 341 QFGYDPEKIKDTPQDCEVMFDGQLAAMMSMPGMEKTLTNQFPDLELRKPVQFDPFTSVFE 162
           QFGYDPEKIKDTPQDCEV  D +LAAMMSMPGME+TLTNQFPDL LRK VQFDPFTSVFE
Sbjct: 284 QFGYDPEKIKDTPQDCEVT-DAELAAMMSMPGMEQTLTNQFPDLGLRKSVQFDPFTSVFE 342

Query: 161 TLKKLVPLYFK* 126
           TLKKLVPLYFK*
Sbjct: 343 TLKKLVPLYFK* 354


 Score =  77 bits (189), Expect = 1e-014
 Identities = 36/44 (81%), Positives = 37/44 (84%)
 Frame = -2

Query: 453 FPTIPFIPKLPYDVIATDYDNYAFVFGAKDRSFVQVYSVWVRPG 322
           FPTIPFIPKLPYDVIATDYDNYA V GAKD+ FVQVYS    PG
Sbjct: 228 FPTIPFIPKLPYDVIATDYDNYALVSGAKDKGFVQVYSRTPNPG 271

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,452,705,711
Number of Sequences: 33410
Number of Extensions: 6452705711
Number of Successful Extensions: 227101295
Number of sequences better than 0.0: 0