BLASTX 7.6.2
Query= UN12018 /QuerySize=803
(802 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15228379|ref|NP_190414.1| zinc finger CCCH domain-containing ... 175 9e-042
gi|297816042|ref|XP_002875904.1| zinc finger (CCCH-type) family ... 175 9e-042
gi|297793917|ref|XP_002864843.1| zinc finger (CCCH-type) family ... 150 3e-034
gi|15242694|ref|NP_201131.1| zinc finger CCCH domain-containing ... 146 5e-033
gi|55819798|gb|AAV66094.1| At5g63260 [Arabidopsis thaliana] 146 5e-033
gi|334188594|ref|NP_001190604.1| zinc finger CCCH domain-contain... 146 5e-033
gi|225456787|ref|XP_002277300.1| PREDICTED: hypothetical protein... 122 5e-026
gi|224119564|ref|XP_002318105.1| predicted protein [Populus tric... 122 7e-026
gi|224133812|ref|XP_002321667.1| predicted protein [Populus tric... 122 9e-026
gi|255540399|ref|XP_002511264.1| nucleic acid binding protein, p... 112 1e-022
gi|307136126|gb|ADN33972.1| nucleic acid binding protein [Cucumi... 111 2e-022
gi|297847070|ref|XP_002891416.1| zinc finger (CCCH-type) family ... 102 6e-020
gi|42571795|ref|NP_973988.1| zinc finger CCCH domain-containing ... 94 3e-017
gi|225452230|ref|XP_002268649.1| PREDICTED: hypothetical protein... 94 3e-017
gi|225452232|ref|XP_002268612.1| PREDICTED: hypothetical protein... 94 3e-017
gi|115488274|ref|NP_001066624.1| Os12g0405100 [Oryza sativa Japo... 91 2e-016
gi|218186710|gb|EEC69137.1| hypothetical protein OsI_38063 [Oryz... 91 2e-016
gi|326489471|dbj|BAK01716.1| predicted protein [Hordeum vulgare ... 89 9e-016
gi|122207693|sp|Q2R4J4.2|C3H63_ORYSJ RecName: Full=Zinc finger C... 88 1e-015
gi|108864369|gb|ABG22481.1| Zinc finger CCCH type domain contain... 88 1e-015
>gi|15228379|ref|NP_190414.1| zinc finger CCCH domain-containing protein 43
[Arabidopsis thaliana]
Length = 448
Score = 175 bits (442), Expect = 9e-042
Identities = 78/93 (83%), Positives = 82/93 (88%)
Frame = -3
Query: 593 LKLGIIKFKFTCKYHHPKNRLPKQPPYALNDKGLPLRPDQVICTHYSRYGICKFGPACRF 414
+K G KFKF CKYHHPKNRLPK PPYALNDKGLPLRPDQ ICT+YSRYGICKFGPACRF
Sbjct: 356 MKTGDCKFKFNCKYHHPKNRLPKLPPYALNDKGLPLRPDQNICTYYSRYGICKFGPACRF 415
Query: 413 DHSIQLPDSTGSSHAVVEPPQVGANGNESDGWN 315
DHS+Q P ST SS A+VEPPQV ANGNESDGWN
Sbjct: 416 DHSVQPPYSTESSQAIVEPPQVSANGNESDGWN 448
>gi|297816042|ref|XP_002875904.1| zinc finger (CCCH-type) family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 447
Score = 175 bits (442), Expect = 9e-042
Identities = 78/93 (83%), Positives = 82/93 (88%)
Frame = -3
Query: 593 LKLGIIKFKFTCKYHHPKNRLPKQPPYALNDKGLPLRPDQVICTHYSRYGICKFGPACRF 414
+K G KFKF CKYHHPKNRLPK PPYALNDKGLPLRPDQ ICT+YSRYGICKFGPACRF
Sbjct: 355 MKTGDCKFKFNCKYHHPKNRLPKLPPYALNDKGLPLRPDQNICTYYSRYGICKFGPACRF 414
Query: 413 DHSIQLPDSTGSSHAVVEPPQVGANGNESDGWN 315
DHS+Q P ST SS A+VEPPQV ANGNESDGWN
Sbjct: 415 DHSVQPPYSTESSQAIVEPPQVSANGNESDGWN 447
>gi|297793917|ref|XP_002864843.1| zinc finger (CCCH-type) family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 434
Score = 150 bits (377), Expect = 3e-034
Identities = 68/93 (73%), Positives = 74/93 (79%), Gaps = 1/93 (1%)
Frame = -3
Query: 593 LKLGIIKFKFTCKYHHPKNRLPKQPPYALNDKGLPLRPDQVICTHYSRYGICKFGPACRF 414
LK G KFK+ CKYHHPKNRLPKQ P++ NDKGLPLRPDQ +CTHYSRYGICKFGPACRF
Sbjct: 343 LKTGDCKFKYKCKYHHPKNRLPKQAPFSFNDKGLPLRPDQSMCTHYSRYGICKFGPACRF 402
Query: 413 DHSIQLPDSTGSSHAVVEPPQVGANGNESDGWN 315
DHSI P + SS VE PQ GANGNE D W+
Sbjct: 403 DHSIP-PTFSPSSSQTVEAPQGGANGNEDDSWH 434
>gi|15242694|ref|NP_201131.1| zinc finger CCCH domain-containing protein 67
[Arabidopsis thaliana]
Length = 435
Score = 146 bits (367), Expect = 5e-033
Identities = 67/93 (72%), Positives = 73/93 (78%), Gaps = 1/93 (1%)
Frame = -3
Query: 593 LKLGIIKFKFTCKYHHPKNRLPKQPPYALNDKGLPLRPDQVICTHYSRYGICKFGPACRF 414
LK G KFK+ CKYHHPKNRLPKQ ++ NDKGLPLRPDQ +CTHYSRYGICKFGPACRF
Sbjct: 344 LKTGDCKFKYKCKYHHPKNRLPKQAAFSFNDKGLPLRPDQSMCTHYSRYGICKFGPACRF 403
Query: 413 DHSIQLPDSTGSSHAVVEPPQVGANGNESDGWN 315
DHSI P + SS VE QVGANGNE D W+
Sbjct: 404 DHSIP-PTFSPSSSQTVEARQVGANGNEDDSWH 435
>gi|55819798|gb|AAV66094.1| At5g63260 [Arabidopsis thaliana]
Length = 435
Score = 146 bits (367), Expect = 5e-033
Identities = 67/93 (72%), Positives = 73/93 (78%), Gaps = 1/93 (1%)
Frame = -3
Query: 593 LKLGIIKFKFTCKYHHPKNRLPKQPPYALNDKGLPLRPDQVICTHYSRYGICKFGPACRF 414
LK G KFK+ CKYHHPKNRLPKQ ++ NDKGLPLRPDQ +CTHYSRYGICKFGPACRF
Sbjct: 344 LKTGDCKFKYKCKYHHPKNRLPKQAAFSFNDKGLPLRPDQSMCTHYSRYGICKFGPACRF 403
Query: 413 DHSIQLPDSTGSSHAVVEPPQVGANGNESDGWN 315
DHSI P + SS VE QVGANGNE D W+
Sbjct: 404 DHSIP-PTFSPSSSQTVEARQVGANGNEDDSWH 435
>gi|334188594|ref|NP_001190604.1| zinc finger CCCH domain-containing protein 67
[Arabidopsis thaliana]
Length = 451
Score = 146 bits (367), Expect = 5e-033
Identities = 67/93 (72%), Positives = 73/93 (78%), Gaps = 1/93 (1%)
Frame = -3
Query: 593 LKLGIIKFKFTCKYHHPKNRLPKQPPYALNDKGLPLRPDQVICTHYSRYGICKFGPACRF 414
LK G KFK+ CKYHHPKNRLPKQ ++ NDKGLPLRPDQ +CTHYSRYGICKFGPACRF
Sbjct: 360 LKTGDCKFKYKCKYHHPKNRLPKQAAFSFNDKGLPLRPDQSMCTHYSRYGICKFGPACRF 419
Query: 413 DHSIQLPDSTGSSHAVVEPPQVGANGNESDGWN 315
DHSI P + SS VE QVGANGNE D W+
Sbjct: 420 DHSIP-PTFSPSSSQTVEARQVGANGNEDDSWH 451
>gi|225456787|ref|XP_002277300.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 484
Score = 122 bits (306), Expect = 5e-026
Identities = 60/134 (44%), Positives = 74/134 (55%), Gaps = 3/134 (2%)
Frame = -3
Query: 731 SLLPPHTL*TTTTTHQLKQVFSHHTNIKNLLRSFQNVRTSLSAVTILKLGIIKFKFTCKY 552
S+ PP T H ++L+ F LK G KF+ CKY
Sbjct: 329 SMHPPPAFVINNTATDANVYGHHQQQQQSLIEDFPERPGQPECSYFLKTGDCKFRAACKY 388
Query: 551 HHPKNRLPKQPPYALNDKGLPLRPDQVICTHYSRYGICKFGPACRFDHSIQLPDSTGSSH 372
HHPKNR+PK PP L+DKGLPLRPDQ ICTHY+RYGICKFGPAC+FDH + +S +
Sbjct: 389 HHPKNRIPKSPPCTLSDKGLPLRPDQNICTHYNRYGICKFGPACKFDHPVNYGNSASAPS 448
Query: 371 AVV---EPPQVGAN 339
A +PP G +
Sbjct: 449 AESGQDQPPPFGGS 462
>gi|224119564|ref|XP_002318105.1| predicted protein [Populus trichocarpa]
Length = 477
Score = 122 bits (305), Expect = 7e-026
Identities = 53/73 (72%), Positives = 59/73 (80%)
Frame = -3
Query: 593 LKLGIIKFKFTCKYHHPKNRLPKQPPYALNDKGLPLRPDQVICTHYSRYGICKFGPACRF 414
+K G KFK CKYHHPKNR+ K PP L+DKGLPLRPDQ IC+HYSRYGICKFGP+C+F
Sbjct: 375 MKFGDCKFKSNCKYHHPKNRISKSPPLTLSDKGLPLRPDQNICSHYSRYGICKFGPSCKF 434
Query: 413 DHSIQLPDSTGSS 375
DHSIQ S GSS
Sbjct: 435 DHSIQPASSIGSS 447
>gi|224133812|ref|XP_002321667.1| predicted protein [Populus trichocarpa]
Length = 341
Score = 122 bits (304), Expect = 9e-026
Identities = 53/72 (73%), Positives = 61/72 (84%), Gaps = 1/72 (1%)
Frame = -3
Query: 593 LKLGIIKFKFTCKYHHPKNRLPKQPPYALNDKGLPLRPDQVICTHYSRYGICKFGPACRF 414
+K G KFK CKYHHPKNR+PK P L+DKGLPLRPDQ+IC++YSRYGICKFGPAC+F
Sbjct: 237 MKFGDCKFKSNCKYHHPKNRIPKSPSLTLSDKGLPLRPDQIICSYYSRYGICKFGPACKF 296
Query: 413 DHSIQLPDSTGS 378
DHSIQ P S+GS
Sbjct: 297 DHSIQ-PPSSGS 307
>gi|255540399|ref|XP_002511264.1| nucleic acid binding protein, putative
[Ricinus communis]
Length = 495
Score = 112 bits (278), Expect = 1e-022
Identities = 51/80 (63%), Positives = 60/80 (75%), Gaps = 1/80 (1%)
Frame = -3
Query: 593 LKLGIIKFKFTCKYHHPKNRLPKQPPYALNDKGLPLRPDQVICTHYSRYGICKFGPACRF 414
+K G KFK CKYHHPKN + K PP L+DKGLPLRP Q IC++YSRYGICKFGPAC+F
Sbjct: 389 MKTGDCKFKSNCKYHHPKNHISKSPPCVLSDKGLPLRPGQNICSYYSRYGICKFGPACKF 448
Query: 413 DHSIQ-LPDSTGSSHAVVEP 357
DH IQ + +TGS+ V P
Sbjct: 449 DHPIQPVSSTTGSADDVRMP 468
>gi|307136126|gb|ADN33972.1| nucleic acid binding protein [Cucumis melo subsp.
melo]
Length = 475
Score = 111 bits (275), Expect = 2e-022
Identities = 50/70 (71%), Positives = 55/70 (78%), Gaps = 1/70 (1%)
Frame = -3
Query: 593 LKLGIIKFKFTCKYHHPKNRLPKQPPYALNDKGLPLRPDQVICTHYSRYGICKFGPACRF 414
LK G KFK CKYHHPKNR PK P LNDKGLPLRPDQ +CT+YSRYGICKFGP+C+F
Sbjct: 370 LKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNVCTYYSRYGICKFGPSCKF 429
Query: 413 DHSIQLPDST 384
DH LP S+
Sbjct: 430 DHPF-LPTSS 438
>gi|297847070|ref|XP_002891416.1| zinc finger (CCCH-type) family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 82
Score = 102 bits (254), Expect = 6e-020
Identities = 43/63 (68%), Positives = 48/63 (76%)
Frame = -3
Query: 593 LKLGIIKFKFTCKYHHPKNRLPKQPPYALNDKGLPLRPDQVICTHYSRYGICKFGPACRF 414
L+ G K CKYHHPKN P++PP LNDKGLPLRPDQ IC HYSR+GICK GP C+F
Sbjct: 19 LRTGNCYLKQNCKYHHPKNITPREPPCPLNDKGLPLRPDQAICPHYSRFGICKSGPTCKF 78
Query: 413 DHS 405
DHS
Sbjct: 79 DHS 81
>gi|42571795|ref|NP_973988.1| zinc finger CCCH domain-containing protein 13
[Arabidopsis thaliana]
Length = 82
Score = 94 bits (231), Expect = 3e-017
Identities = 39/62 (62%), Positives = 44/62 (70%)
Frame = -3
Query: 593 LKLGIIKFKFTCKYHHPKNRLPKQPPYALNDKGLPLRPDQVICTHYSRYGICKFGPACRF 414
L+ G K CKYHHPKN P +P LNDKGLPLRP Q IC HYSR+GIC+ GP C+F
Sbjct: 19 LRTGNCYLKQNCKYHHPKNITPSEPQCTLNDKGLPLRPGQAICPHYSRFGICRSGPTCKF 78
Query: 413 DH 408
DH
Sbjct: 79 DH 80
>gi|225452230|ref|XP_002268649.1| PREDICTED: hypothetical protein isoform 2
[Vitis vinifera]
Length = 378
Score = 94 bits (231), Expect = 3e-017
Identities = 45/83 (54%), Positives = 56/83 (67%), Gaps = 6/83 (7%)
Frame = -3
Query: 593 LKLGIIKFKFTCKYHHPKNRLPKQPPYALNDKGLPLRPDQVICTHYSRYGICKFGPACRF 414
+K G K+K C+YHHPK+R+P P AL+DKGLPLRP + IC HY YGICK+G AC F
Sbjct: 273 MKTGDCKYKSACRYHHPKSRVPGLPVCALSDKGLPLRPGKKICWHYESYGICKYGRACLF 332
Query: 413 DHSIQLPDSTGSSHAV---VEPP 354
DH P+ T SS V ++PP
Sbjct: 333 DHP---PNHTPSSFPVGSKLDPP 352
>gi|225452232|ref|XP_002268612.1| PREDICTED: hypothetical protein isoform 1
[Vitis vinifera]
Length = 417
Score = 94 bits (231), Expect = 3e-017
Identities = 45/83 (54%), Positives = 56/83 (67%), Gaps = 6/83 (7%)
Frame = -3
Query: 593 LKLGIIKFKFTCKYHHPKNRLPKQPPYALNDKGLPLRPDQVICTHYSRYGICKFGPACRF 414
+K G K+K C+YHHPK+R+P P AL+DKGLPLRP + IC HY YGICK+G AC F
Sbjct: 312 MKTGDCKYKSACRYHHPKSRVPGLPVCALSDKGLPLRPGKKICWHYESYGICKYGRACLF 371
Query: 413 DHSIQLPDSTGSSHAV---VEPP 354
DH P+ T SS V ++PP
Sbjct: 372 DHP---PNHTPSSFPVGSKLDPP 391
>gi|115488274|ref|NP_001066624.1| Os12g0405100 [Oryza sativa Japonica Group]
Length = 454
Score = 91 bits (223), Expect = 2e-016
Identities = 39/62 (62%), Positives = 44/62 (70%)
Frame = -3
Query: 593 LKLGIIKFKFTCKYHHPKNRLPKQPPYALNDKGLPLRPDQVICTHYSRYGICKFGPACRF 414
+K G KF CK+HHPK RL P ALN GLPLRP + +CT YSRYGICKFGP C+F
Sbjct: 328 MKTGDCKFGAVCKFHHPKERLVPAPNCALNSLGLPLRPGEPVCTFYSRYGICKFGPNCKF 387
Query: 413 DH 408
DH
Sbjct: 388 DH 389
>gi|218186710|gb|EEC69137.1| hypothetical protein OsI_38063 [Oryza sativa Indica
Group]
Length = 395
Score = 91 bits (223), Expect = 2e-016
Identities = 39/62 (62%), Positives = 44/62 (70%)
Frame = -3
Query: 593 LKLGIIKFKFTCKYHHPKNRLPKQPPYALNDKGLPLRPDQVICTHYSRYGICKFGPACRF 414
+K G KF CK+HHPK RL P ALN GLPLRP + +CT YSRYGICKFGP C+F
Sbjct: 269 MKTGDCKFGAVCKFHHPKERLVPAPNCALNSLGLPLRPGEPVCTFYSRYGICKFGPNCKF 328
Query: 413 DH 408
DH
Sbjct: 329 DH 330
>gi|326489471|dbj|BAK01716.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 489
Score = 89 bits (218), Expect = 9e-016
Identities = 39/80 (48%), Positives = 51/80 (63%), Gaps = 4/80 (5%)
Frame = -3
Query: 593 LKLGIIKFKFTCKYHHPKNRLPKQPPYALNDKGLPLRPDQVICTHYSRYGICKFGPACRF 414
+K G KFK CKYHHP++ +P A + GLPLRPDQ +CT+Y RYG+CKFGPAC +
Sbjct: 401 VKSGFCKFKVKCKYHHPRSLVPPPTARAFSPLGLPLRPDQPMCTYYERYGVCKFGPACMY 460
Query: 413 DHSIQLPDSTGSSHAVVEPP 354
+H P + G + PP
Sbjct: 461 NH----PFNFGHPVSAAGPP 476
>gi|122207693|sp|Q2R4J4.2|C3H63_ORYSJ RecName: Full=Zinc finger CCCH
domain-containing protein 63; Short=OsC3H63
Length = 444
Score = 88 bits (216), Expect = 1e-015
Identities = 38/62 (61%), Positives = 44/62 (70%)
Frame = -3
Query: 593 LKLGIIKFKFTCKYHHPKNRLPKQPPYALNDKGLPLRPDQVICTHYSRYGICKFGPACRF 414
+K G KF CK+HHPK R+ P AL+ GLPLRP + ICT YSRYGICKFGP C+F
Sbjct: 319 MKTGDCKFGAVCKFHHPKERIIPTPNCALSSLGLPLRPGEPICTFYSRYGICKFGPNCKF 378
Query: 413 DH 408
DH
Sbjct: 379 DH 380
>gi|108864369|gb|ABG22481.1| Zinc finger CCCH type domain containing protein
ZFN, putative, expressed [Oryza sativa Japonica Group]
Length = 406
Score = 88 bits (216), Expect = 1e-015
Identities = 38/62 (61%), Positives = 44/62 (70%)
Frame = -3
Query: 593 LKLGIIKFKFTCKYHHPKNRLPKQPPYALNDKGLPLRPDQVICTHYSRYGICKFGPACRF 414
+K G KF CK+HHPK R+ P AL+ GLPLRP + ICT YSRYGICKFGP C+F
Sbjct: 281 MKTGDCKFGAVCKFHHPKERIIPTPNCALSSLGLPLRPGEPICTFYSRYGICKFGPNCKF 340
Query: 413 DH 408
DH
Sbjct: 341 DH 342
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,399,880,566,028
Number of Sequences: 15229318
Number of Extensions: 1399880566028
Number of Successful Extensions: 384417364
Number of sequences better than 0.0: 0
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