BLASTX 7.6.2
Query= UN12107 /QuerySize=1192
(1191 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G03270.1 | Symbols: CYCD6;1 | CYCD6;1 (Cyclin ... 441 7e-124
TAIR9_protein||AT5G65420.1 | Symbols: CYCD4;1 | CYCD4;1 (CYCLIN ... 108 8e-024
TAIR9_protein||AT1G70210.1 | Symbols: CYCD1;1 | CYCD1;1 (CYCLIN ... 105 7e-023
TAIR9_protein||AT2G22490.1 | Symbols: CYCD2;1, ATCYCD2;1 | CYCD2... 97 1e-020
TAIR9_protein||AT5G10440.1 | Symbols: CYCD4;2 | CYCD4;2 (cyclin ... 95 7e-020
>TAIR9_protein||AT4G03270.1 | Symbols: CYCD6;1 | CYCD6;1 (Cyclin D6;1);
cyclin-dependent protein kinase | chr4:1432375-1433691 REVERSE
Length = 303
Score = 441 bits (1132), Expect = 7e-124
Identities = 241/307 (78%), Positives = 261/307 (85%), Gaps = 14/307 (4%)
Frame = +1
Query: 64 MEFHLEHPLSHSSPSSSSIHNNDETNNDNSLLPPNSLFLVELQHMPSPHYFLTLKSSASL 243
MEFHLEHPLSH SS+HNN + D L P+SLFLVE QHMPS HYF +LKSSA L
Sbjct: 1 MEFHLEHPLSH-----SSLHNNFNDDTDYETL-PHSLFLVEFQHMPSSHYFHSLKSSAFL 54
Query: 244 LSNRNHAVSSAIQYSRKLDDPSLTYLAVNYLDRFLSSEDMMLQSKPWILKLISLSCVSLS 423
LSNRN A+SS QYSRK DDPSLTYLAVNYLDRFLSSEDM QSKPWILKLISLSCVSLS
Sbjct: 55 LSNRNQAISSITQYSRKFDDPSLTYLAVNYLDRFLSSEDMP-QSKPWILKLISLSCVSLS 113
Query: 424 SKMRKSDISVCDLPVKGEMFDAQMIERMENVILGALKWRMRSVTPFSFLSFFLSRLFELK 603
+KMRK D+SV DLPV+GE FDAQMIERMENVILGALKWRMRSVTPFSFL+FF+S LFELK
Sbjct: 114 AKMRKPDMSVSDLPVEGEFFDAQMIERMENVILGALKWRMRSVTPFSFLAFFIS-LFELK 172
Query: 604 -EDHSLLKHSLKAQATDLTFSLQHDIKFLEFKPSVIAAAALLFASSELCPLQFPYFSNRI 780
ED LLKHSLK+Q +DLTFSLQHDI FLEFKPSVIA AALLFAS ELCPLQFP FSNRI
Sbjct: 173 EEDPLLLKHSLKSQTSDLTFSLQHDISFLEFKPSVIAGAALLFASFELCPLQFPCFSNRI 232
Query: 781 CQYTYVNNDELMECYTAMQERD-VVGDNEGSNDTAVNVLDQQFSSCE-ESAIT---ASSP 945
Q TYVN DELMECY A+QERD +VG+NEGS +TAVNVLDQQFSSCE + +IT +SSP
Sbjct: 233 NQCTYVNKDELMECYKAIQERDIIVGENEGSTETAVNVLDQQFSSCESDKSITITASSSP 292
Query: 946 KRRRTST 966
KRR+TST
Sbjct: 293 KRRKTST 299
>TAIR9_protein||AT5G65420.1 | Symbols: CYCD4;1 | CYCD4;1 (CYCLIN D4;1);
cyclin-dependent protein kinase regulator | chr5:26141592-26143750
REVERSE
Length = 309
Score = 108 bits (269), Expect = 8e-024
Identities = 68/197 (34%), Positives = 118/197 (59%), Gaps = 9/197 (4%)
Frame = +1
Query: 184 ELQHMPSPHYFLTLKSSASLLSNRNHAVSSAIQYSRKLDD--PSLTYLAVNYLDRFLSSE 357
E QH+PS Y L+S L+ + I + ++ P LA+NYLDRFLS
Sbjct: 54 EKQHLPSDDYIKRLRSGDLDLNVGRRDALNWIWKACEVHQFGPLCFCLAMNYLDRFLSVH 113
Query: 358 DMMLQSKPWILKLISLSCVSLSSKMRKSDI-SVCDLPVKGE--MFDAQMIERMENVILGA 528
D+ K WIL+L++++C+SL++K+ ++++ + DL V +F+A+ ++RME ++L
Sbjct: 114 DLP-SGKGWILQLLAVACLSLAAKIEETEVPMLIDLQVGDPQFVFEAKSVQRMELLVLNK 172
Query: 529 LKWRMRSVTPFSFLSFFLSRLFELKEDHSLLKHSLKAQATDLTFSLQHDIKFLEFKPSVI 708
LKWR+R++TP S++ +FL ++ + ++ S ++L +++ + S I FLEF+PS +
Sbjct: 173 LKWRLRAITPCSYIRYFLRKMSKCDQEPS---NTLISRSLQVIASTTKGIDFLEFRPSEV 229
Query: 709 AAAALLFASSELCPLQF 759
AAA L S EL + F
Sbjct: 230 AAAVALSVSGELQRVHF 246
>TAIR9_protein||AT1G70210.1 | Symbols: CYCD1;1 | CYCD1;1 (CYCLIN D1;1);
cyclin-dependent protein kinase regulator | chr1:26440015-26441980
FORWARD
Length = 340
Score = 105 bits (261), Expect = 7e-023
Identities = 85/278 (30%), Positives = 150/278 (53%), Gaps = 26/278 (9%)
Frame = +1
Query: 175 FLVELQHMPSPHYFLTLKSSASL-LSNRNHAVSSAIQYSRKLD-DPSLTYLAVNYLDRFL 348
F+ + +H H +L+ + SL S R +V+ ++ + P YLAVNY+DRFL
Sbjct: 55 FIEDERHFVPGHDYLSRFQTRSLDASAREDSVAWILKVQAYYNFQPLTAYLAVNYMDRFL 114
Query: 349 SSEDMMLQSKPWILKLISLSCVSLSSKMRKSDI-SVCDLPVKG--EMFDAQMIERMENVI 519
+ + ++ W ++L++++C+SL++KM + + S+ D V G +F+A+ I+RME ++
Sbjct: 115 YAR-RLPETSGWPMQLLAVACLSLAAKMEEILVPSLFDFQVAGVKYLFEAKTIKRMELLV 173
Query: 520 LGALKWRMRSVTPFSFLSFFLSRLFELKEDHSLLKHSLKAQATDLTFSLQHDIKFLEFKP 699
L L WR+RSVTPF F+SFF +++ + L + + AT++ S + FLE+ P
Sbjct: 174 LSVLDWRLRSVTPFDFISFF---AYKIDPSGTFLGFFI-SHATEIILSNIKEASFLEYWP 229
Query: 700 SVIAAAALLFASSELCPLQF---PYFSNRI-CQYTYVNNDELMECYTAMQERDVVGDNEG 867
S IAAAA+L ++EL L P+ S C ++ ++++ CY M+ + +N
Sbjct: 230 SSIAAAAILCVANELPSLSSVVNPHESPETWCD--GLSKEKIVRCYRLMKAMAI--ENNR 285
Query: 868 SND--------TAVNVLDQQFSSCEESAITASSPKRRR 957
N +V +ES+ ++SSP +RR
Sbjct: 286 LNTPKVIAKLRVSVRASSTLTRPSDESSFSSSSPCKRR 323
>TAIR9_protein||AT2G22490.1 | Symbols: CYCD2;1, ATCYCD2;1 | CYCD2;1 (Cyclin
D2;1); cyclin-dependent protein kinase regulator/ protein binding |
chr2:9554157-9555873 REVERSE
Length = 362
Score = 97 bits (241), Expect = 1e-020
Identities = 62/188 (32%), Positives = 110/188 (58%), Gaps = 11/188 (5%)
Frame = +1
Query: 184 ELQHMPSPHYFLTLKSSASLLSNRNHAVSSAIQYSRKLDDPSLTY-LAVNYLDRFLSSED 360
E++ P Y L S LS RN A+ ++ L L++NYLDRFL+S +
Sbjct: 74 EIEFCPGTDYVKRLLSGDLDLSVRNQALDWILKVCAHYHFGHLCICLSMNYLDRFLTSYE 133
Query: 361 MMLQSKPWILKLISLSCVSLSSKMRKSDI-SVCDLPVKGE--MFDAQMIERMENVILGAL 531
+ + K W +L+++SC+SL+SKM ++D+ + DL V+ +F+A+ I+RME +++ L
Sbjct: 134 LP-KDKDWAAQLLAVSCLSLASKMEETDVPHIVDLQVEDPKFVFEAKTIKRMELLVVTTL 192
Query: 532 KWRMRSVTPFSFLSFFLSRLFELKEDHSLLKHSLKAQATDLTFSLQHDIKFLEFKPSVIA 711
WR++++TPFSF+ +F+ ++ + +L +++ + I+FL+F+PS IA
Sbjct: 193 NWRLQALTPFSFIDYFVDKI------SGHVSENLIYRSSRFILNTTKAIEFLDFRPSEIA 246
Query: 712 AAALLFAS 735
AAA + S
Sbjct: 247 AAAAVSVS 254
>TAIR9_protein||AT5G10440.1 | Symbols: CYCD4;2 | CYCD4;2 (cyclin d4;2);
cyclin-dependent protein kinase | chr5:3280611-3282342 REVERSE
Length = 299
Score = 95 bits (235), Expect = 7e-020
Identities = 66/218 (30%), Positives = 120/218 (55%), Gaps = 16/218 (7%)
Frame = +1
Query: 304 PSLTYLAVNYLDRFLSSEDMMLQSKPWILKLISLSCVSLSSKMRKSDI-SVCDLPVKGEM 480
P LA+NYLDRFLS D+ K W ++L++++C+SL++K+ ++++ + L V M
Sbjct: 87 PLCICLAMNYLDRFLSVHDLP-SGKAWTVQLLAVACLSLAAKIEETNVPELMQLQVGAPM 145
Query: 481 --FDAQMIERMENVILGALKWRMRSVTPFSFLSFFLSRL--FELKEDHSLLKHSLKAQAT 648
F+A+ ++RME ++L L+WR+R+VTP S++ +FLS++ ++ + L+ SL+ A
Sbjct: 146 FVFEAKSVQRMELLVLNVLRWRLRAVTPCSYVRYFLSKINGYDQEPHSRLVTRSLQVIA- 204
Query: 649 DLTFSLQHDIKFLEFKPSVIAAAALLFASSELCPLQFPYFSNRICQYTYVNNDELMECYT 828
S I FLEF+ S IAAA L S E F FS ++ + + + +
Sbjct: 205 ----STTKGIDFLEFRASEIAAAVALSVSGE----HFDKFSFS-SSFSSLEKERVKKIGE 255
Query: 829 AMQERDVVGDNEGSNDTAVNVLDQQFSSCEESAITASS 942
++ ++ N+T + +++S +A +SS
Sbjct: 256 MIERDGSSSSSQTPNNTVLQFKSRRYSHSLSTASVSSS 293
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,495,845,870
Number of Sequences: 33410
Number of Extensions: 6495845870
Number of Successful Extensions: 227111770
Number of sequences better than 0.0: 0
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