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GenBank blast output of UN12127


BLASTX 7.6.2

Query= UN12127 /QuerySize=1468
        (1467 letters)

Database: GenBank nr;
          15,229,318 sequences; 5,219,829,378 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|34481719|emb|CAD54082.1| MEI1 protein [Arabidopsis thaliana]         65   2e-008
gi|11079482|gb|AAG29194.1|AC078898_4 hypothetical protein [Arabi...     65   2e-008
gi|145337666|ref|NP_177856.2| topoisomerase (DNA) II binding pro...     65   2e-008
gi|334183968|ref|NP_001185418.1| topoisomerase (DNA) II binding ...     65   2e-008
gi|297839591|ref|XP_002887677.1| MEI1 protein [Arabidopsis lyrat...     63   1e-007
gi|317106686|dbj|BAJ53188.1| JMS09K11.6 [Jatropha curcas]               59   1e-006
gi|255558572|ref|XP_002520311.1| topbp1, putative [Ricinus commu...     58   4e-006

>gi|34481719|emb|CAD54082.1| MEI1 protein [Arabidopsis thaliana]

          Length = 972

 Score =  65 bits (158), Expect = 2e-008
 Identities = 34/45 (75%), Positives = 38/45 (84%)
 Frame = +2

Query: 530 KVKIEKLVTSMEGVLVSRTSSDVNFVIVKNVLAAKYKTVAQRLPI 664
           KVKI++LVTSM GVL+SR SSDVNFVIVKNVLAAKYK    + PI
Sbjct: 115 KVKIKELVTSMGGVLLSRASSDVNFVIVKNVLAAKYKWALNKKPI 159


 Score =  60 bits (145), Expect = 7e-007
 Identities = 27/35 (77%), Positives = 29/35 (82%)
 Frame = +1

Query: 130 CCENGRALPQGGFTCCLAMDGPKVLASGFQIDEKV 234
           C + GR LPQ GFTCCLAMDG KVLASGF +DEKV
Sbjct:  82 CAKEGRPLPQRGFTCCLAMDGLKVLASGFLVDEKV 116

>gi|11079482|gb|AAG29194.1|AC078898_4 hypothetical protein [Arabidopsis
        thaliana]

          Length = 783

 Score =  65 bits (158), Expect = 2e-008
 Identities = 34/45 (75%), Positives = 38/45 (84%)
 Frame = +2

Query: 530 KVKIEKLVTSMEGVLVSRTSSDVNFVIVKNVLAAKYKTVAQRLPI 664
           KVKI++LVTSM GVL+SR SSDVNFVIVKNVLAAKYK    + PI
Sbjct: 115 KVKIKELVTSMGGVLLSRASSDVNFVIVKNVLAAKYKWALNKKPI 159


 Score =  60 bits (145), Expect = 7e-007
 Identities = 27/35 (77%), Positives = 29/35 (82%)
 Frame = +1

Query: 130 CCENGRALPQGGFTCCLAMDGPKVLASGFQIDEKV 234
           C + GR LPQ GFTCCLAMDG KVLASGF +DEKV
Sbjct:  82 CAKEGRPLPQRGFTCCLAMDGLKVLASGFLVDEKV 116

>gi|145337666|ref|NP_177856.2| topoisomerase (DNA) II binding protein 1
        [Arabidopsis thaliana]

          Length = 972

 Score =  65 bits (158), Expect = 2e-008
 Identities = 34/45 (75%), Positives = 38/45 (84%)
 Frame = +2

Query: 530 KVKIEKLVTSMEGVLVSRTSSDVNFVIVKNVLAAKYKTVAQRLPI 664
           KVKI++LVTSM GVL+SR SSDVNFVIVKNVLAAKYK    + PI
Sbjct: 115 KVKIKELVTSMGGVLLSRASSDVNFVIVKNVLAAKYKWALNKKPI 159


 Score =  60 bits (145), Expect = 7e-007
 Identities = 27/35 (77%), Positives = 29/35 (82%)
 Frame = +1

Query: 130 CCENGRALPQGGFTCCLAMDGPKVLASGFQIDEKV 234
           C + GR LPQ GFTCCLAMDG KVLASGF +DEKV
Sbjct:  82 CAKEGRPLPQRGFTCCLAMDGLKVLASGFLVDEKV 116

>gi|334183968|ref|NP_001185418.1| topoisomerase (DNA) II binding protein 1
        [Arabidopsis thaliana]

          Length = 955

 Score =  65 bits (158), Expect = 2e-008
 Identities = 34/45 (75%), Positives = 38/45 (84%)
 Frame = +2

Query: 530 KVKIEKLVTSMEGVLVSRTSSDVNFVIVKNVLAAKYKTVAQRLPI 664
           KVKI++LVTSM GVL+SR SSDVNFVIVKNVLAAKYK    + PI
Sbjct: 108 KVKIKELVTSMGGVLLSRASSDVNFVIVKNVLAAKYKWALNKKPI 152


 Score =  60 bits (145), Expect = 7e-007
 Identities = 27/35 (77%), Positives = 29/35 (82%)
 Frame = +1

Query: 130 CCENGRALPQGGFTCCLAMDGPKVLASGFQIDEKV 234
           C + GR LPQ GFTCCLAMDG KVLASGF +DEKV
Sbjct:  75 CAKEGRPLPQRGFTCCLAMDGLKVLASGFLVDEKV 109

>gi|297839591|ref|XP_002887677.1| MEI1 protein [Arabidopsis lyrata subsp.
        lyrata]

          Length = 970

 Score =  63 bits (151), Expect = 1e-007
 Identities = 28/36 (77%), Positives = 30/36 (83%)
 Frame = +1

Query: 130 CCENGRALPQGGFTCCLAMDGPKVLASGFQIDEKVV 237
           C + GR LPQGGFTCCLAMDG KVLASGF IDEK +
Sbjct:  82 CAKEGRPLPQGGFTCCLAMDGLKVLASGFLIDEKAM 117


 Score =  60 bits (145), Expect = 7e-007
 Identities = 31/45 (68%), Positives = 36/45 (80%)
 Frame = +2

Query: 530 KVKIEKLVTSMEGVLVSRTSSDVNFVIVKNVLAAKYKTVAQRLPI 664
           K  I++LVTSM GVL+S+ SSDVNFVIVKNVLAAKYK    + PI
Sbjct: 115 KAMIKELVTSMGGVLLSKASSDVNFVIVKNVLAAKYKWALNKKPI 159

>gi|317106686|dbj|BAJ53188.1| JMS09K11.6 [Jatropha curcas]

          Length = 918

 Score =  59 bits (142), Expect = 1e-006
 Identities = 25/35 (71%), Positives = 30/35 (85%)
 Frame = +1

Query: 130 CCENGRALPQGGFTCCLAMDGPKVLASGFQIDEKV 234
           C +  RALP+ GFTCCLAMDG K+LASGF++DEKV
Sbjct:  82 CAKEHRALPKQGFTCCLAMDGVKILASGFEVDEKV 116


 Score =  57 bits (137), Expect = 6e-006
 Identities = 32/48 (66%), Positives = 36/48 (75%)
 Frame = +2

Query: 530 KVKIEKLVTSMEGVLVSRTSSDVNFVIVKNVLAAKYKTVAQRLPINIL 673
           KVKIEKLVT+M G L ++ SSDV+FVIVKNVLAAKYK     L   IL
Sbjct: 115 KVKIEKLVTAMGGQLHTKASSDVSFVIVKNVLAAKYKWALNNLKKPIL 162

>gi|255558572|ref|XP_002520311.1| topbp1, putative [Ricinus communis]

          Length = 950

 Score =  58 bits (138), Expect = 4e-006
 Identities = 26/35 (74%), Positives = 28/35 (80%)
 Frame = +1

Query: 130 CCENGRALPQGGFTCCLAMDGPKVLASGFQIDEKV 234
           C +  R LP+ GFTCCLAMDG KVLASGF IDEKV
Sbjct:  82 CAKEHRTLPKQGFTCCLAMDGVKVLASGFDIDEKV 116

  Database: GenBank nr
    Posted date:  Thu Sep 08 23:06:31 2011
  Number of letters in database: 5,219,829,378
  Number of sequences in database:  15,229,318

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,399,880,566,028
Number of Sequences: 15229318
Number of Extensions: 1399880566028
Number of Successful Extensions: 384417364
Number of sequences better than 0.0: 0