BLASTX 7.6.2
Query= UN12127 /QuerySize=1468
(1467 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|34481719|emb|CAD54082.1| MEI1 protein [Arabidopsis thaliana] 65 2e-008
gi|11079482|gb|AAG29194.1|AC078898_4 hypothetical protein [Arabi... 65 2e-008
gi|145337666|ref|NP_177856.2| topoisomerase (DNA) II binding pro... 65 2e-008
gi|334183968|ref|NP_001185418.1| topoisomerase (DNA) II binding ... 65 2e-008
gi|297839591|ref|XP_002887677.1| MEI1 protein [Arabidopsis lyrat... 63 1e-007
gi|317106686|dbj|BAJ53188.1| JMS09K11.6 [Jatropha curcas] 59 1e-006
gi|255558572|ref|XP_002520311.1| topbp1, putative [Ricinus commu... 58 4e-006
>gi|34481719|emb|CAD54082.1| MEI1 protein [Arabidopsis thaliana]
Length = 972
Score = 65 bits (158), Expect = 2e-008
Identities = 34/45 (75%), Positives = 38/45 (84%)
Frame = +2
Query: 530 KVKIEKLVTSMEGVLVSRTSSDVNFVIVKNVLAAKYKTVAQRLPI 664
KVKI++LVTSM GVL+SR SSDVNFVIVKNVLAAKYK + PI
Sbjct: 115 KVKIKELVTSMGGVLLSRASSDVNFVIVKNVLAAKYKWALNKKPI 159
Score = 60 bits (145), Expect = 7e-007
Identities = 27/35 (77%), Positives = 29/35 (82%)
Frame = +1
Query: 130 CCENGRALPQGGFTCCLAMDGPKVLASGFQIDEKV 234
C + GR LPQ GFTCCLAMDG KVLASGF +DEKV
Sbjct: 82 CAKEGRPLPQRGFTCCLAMDGLKVLASGFLVDEKV 116
>gi|11079482|gb|AAG29194.1|AC078898_4 hypothetical protein [Arabidopsis
thaliana]
Length = 783
Score = 65 bits (158), Expect = 2e-008
Identities = 34/45 (75%), Positives = 38/45 (84%)
Frame = +2
Query: 530 KVKIEKLVTSMEGVLVSRTSSDVNFVIVKNVLAAKYKTVAQRLPI 664
KVKI++LVTSM GVL+SR SSDVNFVIVKNVLAAKYK + PI
Sbjct: 115 KVKIKELVTSMGGVLLSRASSDVNFVIVKNVLAAKYKWALNKKPI 159
Score = 60 bits (145), Expect = 7e-007
Identities = 27/35 (77%), Positives = 29/35 (82%)
Frame = +1
Query: 130 CCENGRALPQGGFTCCLAMDGPKVLASGFQIDEKV 234
C + GR LPQ GFTCCLAMDG KVLASGF +DEKV
Sbjct: 82 CAKEGRPLPQRGFTCCLAMDGLKVLASGFLVDEKV 116
>gi|145337666|ref|NP_177856.2| topoisomerase (DNA) II binding protein 1
[Arabidopsis thaliana]
Length = 972
Score = 65 bits (158), Expect = 2e-008
Identities = 34/45 (75%), Positives = 38/45 (84%)
Frame = +2
Query: 530 KVKIEKLVTSMEGVLVSRTSSDVNFVIVKNVLAAKYKTVAQRLPI 664
KVKI++LVTSM GVL+SR SSDVNFVIVKNVLAAKYK + PI
Sbjct: 115 KVKIKELVTSMGGVLLSRASSDVNFVIVKNVLAAKYKWALNKKPI 159
Score = 60 bits (145), Expect = 7e-007
Identities = 27/35 (77%), Positives = 29/35 (82%)
Frame = +1
Query: 130 CCENGRALPQGGFTCCLAMDGPKVLASGFQIDEKV 234
C + GR LPQ GFTCCLAMDG KVLASGF +DEKV
Sbjct: 82 CAKEGRPLPQRGFTCCLAMDGLKVLASGFLVDEKV 116
>gi|334183968|ref|NP_001185418.1| topoisomerase (DNA) II binding protein 1
[Arabidopsis thaliana]
Length = 955
Score = 65 bits (158), Expect = 2e-008
Identities = 34/45 (75%), Positives = 38/45 (84%)
Frame = +2
Query: 530 KVKIEKLVTSMEGVLVSRTSSDVNFVIVKNVLAAKYKTVAQRLPI 664
KVKI++LVTSM GVL+SR SSDVNFVIVKNVLAAKYK + PI
Sbjct: 108 KVKIKELVTSMGGVLLSRASSDVNFVIVKNVLAAKYKWALNKKPI 152
Score = 60 bits (145), Expect = 7e-007
Identities = 27/35 (77%), Positives = 29/35 (82%)
Frame = +1
Query: 130 CCENGRALPQGGFTCCLAMDGPKVLASGFQIDEKV 234
C + GR LPQ GFTCCLAMDG KVLASGF +DEKV
Sbjct: 75 CAKEGRPLPQRGFTCCLAMDGLKVLASGFLVDEKV 109
>gi|297839591|ref|XP_002887677.1| MEI1 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 970
Score = 63 bits (151), Expect = 1e-007
Identities = 28/36 (77%), Positives = 30/36 (83%)
Frame = +1
Query: 130 CCENGRALPQGGFTCCLAMDGPKVLASGFQIDEKVV 237
C + GR LPQGGFTCCLAMDG KVLASGF IDEK +
Sbjct: 82 CAKEGRPLPQGGFTCCLAMDGLKVLASGFLIDEKAM 117
Score = 60 bits (145), Expect = 7e-007
Identities = 31/45 (68%), Positives = 36/45 (80%)
Frame = +2
Query: 530 KVKIEKLVTSMEGVLVSRTSSDVNFVIVKNVLAAKYKTVAQRLPI 664
K I++LVTSM GVL+S+ SSDVNFVIVKNVLAAKYK + PI
Sbjct: 115 KAMIKELVTSMGGVLLSKASSDVNFVIVKNVLAAKYKWALNKKPI 159
>gi|317106686|dbj|BAJ53188.1| JMS09K11.6 [Jatropha curcas]
Length = 918
Score = 59 bits (142), Expect = 1e-006
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = +1
Query: 130 CCENGRALPQGGFTCCLAMDGPKVLASGFQIDEKV 234
C + RALP+ GFTCCLAMDG K+LASGF++DEKV
Sbjct: 82 CAKEHRALPKQGFTCCLAMDGVKILASGFEVDEKV 116
Score = 57 bits (137), Expect = 6e-006
Identities = 32/48 (66%), Positives = 36/48 (75%)
Frame = +2
Query: 530 KVKIEKLVTSMEGVLVSRTSSDVNFVIVKNVLAAKYKTVAQRLPINIL 673
KVKIEKLVT+M G L ++ SSDV+FVIVKNVLAAKYK L IL
Sbjct: 115 KVKIEKLVTAMGGQLHTKASSDVSFVIVKNVLAAKYKWALNNLKKPIL 162
>gi|255558572|ref|XP_002520311.1| topbp1, putative [Ricinus communis]
Length = 950
Score = 58 bits (138), Expect = 4e-006
Identities = 26/35 (74%), Positives = 28/35 (80%)
Frame = +1
Query: 130 CCENGRALPQGGFTCCLAMDGPKVLASGFQIDEKV 234
C + R LP+ GFTCCLAMDG KVLASGF IDEKV
Sbjct: 82 CAKEHRTLPKQGFTCCLAMDGVKVLASGFDIDEKV 116
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,399,880,566,028
Number of Sequences: 15229318
Number of Extensions: 1399880566028
Number of Successful Extensions: 384417364
Number of sequences better than 0.0: 0
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