BLASTX 7.6.2
Query= UN12200 /QuerySize=986
(985 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O75494|SF13A_HUMAN Splicing factor, arginine/serine-rich 13A ... 129 5e-029
sp|Q9R0U0|SF13A_MOUSE Splicing factor, arginine/serine-rich 13A ... 129 5e-029
sp|Q8WXF0|SF13B_HUMAN Splicing factor, arginine/serine-rich 13B ... 119 3e-026
sp|P30352|SFRS2_CHICK Splicing factor, arginine/serine-rich 2 OS... 117 1e-025
sp|Q3MHR5|SFRS2_BOVIN Splicing factor, arginine/serine-rich 2 OS... 116 4e-025
sp|Q01130|SFRS2_HUMAN Splicing factor, arginine/serine-rich 2 OS... 116 4e-025
sp|Q62093|SFRS2_MOUSE Splicing factor, arginine/serine-rich 2 OS... 116 4e-025
sp|Q5R1W5|SFRS2_PANTR Splicing factor, arginine/serine-rich 2 OS... 116 4e-025
sp|Q06A98|SFRS2_PIG Splicing factor, arginine/serine-rich 2 OS=S... 116 4e-025
sp|Q6PDU1|SFRS2_RAT Splicing factor, arginine/serine-rich 2 OS=R... 116 4e-025
sp|Q09511|RSP4_CAEEL Probable splicing factor, arginine/serine-r... 111 1e-023
sp|Q9BRL6|SFR2B_HUMAN Splicing factor, arginine/serine-rich 2B O... 109 5e-023
sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein ... 62 7e-009
sp|P78795|EIF3G_SCHPO Eukaryotic translation initiation factor 3... 61 1e-008
sp|Q4P7G1|EIF3G_USTMA Eukaryotic translation initiation factor 3... 59 6e-008
sp|Q44560|RBPA_ANASP Putative RNA-binding protein rbpA OS=Anabae... 58 1e-007
sp|Q6C747|EIF3G_YARLI Eukaryotic translation initiation factor 3... 57 2e-007
sp|Q54PB2|MRD1_DICDI Multiple RNA-binding domain-containing prot... 54 1e-006
sp|Q18409|RSP6_CAEEL Probable splicing factor, arginine/serine-r... 54 2e-006
>sp|O75494|SF13A_HUMAN Splicing factor, arginine/serine-rich 13A OS=Homo sapiens
GN=SFRS13A PE=1 SV=1
Length = 262
Score = 129 bits (322), Expect = 5e-029
Identities = 79/183 (43%), Positives = 105/183 (57%), Gaps = 15/183 (8%)
Frame = +1
Query: 166 RDPPTSLLVRNLRLDCRPDDLRRPFWRFGRLKDIYIPRNYYTGEPRGFGFVQYYDPADAA 345
R P TSL VRN+ D R +DLRR F R+G + D+Y+P ++YT PRGF +VQ+ D DA
Sbjct: 6 RPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAE 65
Query: 346 DAKYHLDGYVLLGREITVVFAEENRKKPSEMRER------SRGRTSTRSPYGYSRSPGYS 507
DA ++LD + GR+I + FA+ +RK P++M+ + S R Y SRS Y
Sbjct: 66 DALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRNVYSSSRYDDYDRYRRSRSRSYE 125
Query: 508 RSPNYRRSYSRSPVYRRSYS---RSPYDERHRSRSVSPGD----RRRSYSRSSSRSRYES 666
R + RS+ + YRRSYS P RSRS S D R RS+SRS S SR S
Sbjct: 126 RRRSRSRSFDYN--YRRSYSPRNSRPTGRPRRSRSHSDNDRFKHRNRSFSRSKSNSRSRS 183
Query: 667 RSQ 675
+SQ
Sbjct: 184 KSQ 186
>sp|Q9R0U0|SF13A_MOUSE Splicing factor, arginine/serine-rich 13A OS=Mus musculus
GN=Sfrs13a PE=1 SV=2
Length = 262
Score = 129 bits (322), Expect = 5e-029
Identities = 79/183 (43%), Positives = 105/183 (57%), Gaps = 15/183 (8%)
Frame = +1
Query: 166 RDPPTSLLVRNLRLDCRPDDLRRPFWRFGRLKDIYIPRNYYTGEPRGFGFVQYYDPADAA 345
R P TSL VRN+ D R +DLRR F R+G + D+Y+P ++YT PRGF +VQ+ D DA
Sbjct: 6 RPPNTSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAE 65
Query: 346 DAKYHLDGYVLLGREITVVFAEENRKKPSEMRER------SRGRTSTRSPYGYSRSPGYS 507
DA ++LD + GR+I + FA+ +RK P++M+ + S R Y SRS Y
Sbjct: 66 DALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAKEGRNVYSSSRYDDYDRYRRSRSRSYE 125
Query: 508 RSPNYRRSYSRSPVYRRSYS---RSPYDERHRSRSVSPGD----RRRSYSRSSSRSRYES 666
R + RS+ + YRRSYS P RSRS S D R RS+SRS S SR S
Sbjct: 126 RRRSRSRSFDYN--YRRSYSPRNSRPTGRPRRSRSHSDNDRFKHRNRSFSRSKSNSRSRS 183
Query: 667 RSQ 675
+SQ
Sbjct: 184 KSQ 186
>sp|Q8WXF0|SF13B_HUMAN Splicing factor, arginine/serine-rich 13B OS=Homo sapiens
GN=SFRS13B PE=1 SV=1
Length = 261
Score = 119 bits (298), Expect = 3e-026
Identities = 77/178 (43%), Positives = 105/178 (58%), Gaps = 15/178 (8%)
Frame = +1
Query: 163 SRDPPTSLLVRNLRLDCRPDDLRRPFWRFGRLKDIYIPRNYYTGEPRGFGFVQYYDPADA 342
+R P TSL +RN+ RP+DLRR F R+G + D+YIP ++YT PRGF +VQ+ D DA
Sbjct: 5 TRPPNTSLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRDA 64
Query: 343 ADAKYHLDGYVLLGREITVVFAEENRKKPSEMRERSRGRTSTRSPYGYSRSPGYSRSPNY 522
DA Y+L+ + GR+I + FA+ +RK P +M+ + R SP + R SRSP+
Sbjct: 65 EDALYNLNRKWVCGRQIEIQFAQGDRKTPGQMKSKER---HPCSPSDHRR----SRSPSQ 117
Query: 523 RRSYSRSPVYRRSYSRSPYDERHRSRSVSPGDRRRSYSRSSSRSR-YESRSQSPGYSR 693
RR+ SRS + R+ RS D SR RR SYS+S SRS+ RS S SR
Sbjct: 118 RRTRSRSSSWGRNRRRS--DSLKESR-----HRRFSYSQSKSRSKSLPRRSTSARQSR 168
>sp|P30352|SFRS2_CHICK Splicing factor, arginine/serine-rich 2 OS=Gallus gallus
GN=SFRS2 PE=2 SV=1
Length = 221
Score = 117 bits (293), Expect = 1e-025
Identities = 89/190 (46%), Positives = 102/190 (53%), Gaps = 18/190 (9%)
Frame = +1
Query: 166 RDPP-----TSLLVRNLRLDCRPDDLRRPFWRFGRLKDIYIPRNYYTGEPRGFGFVQYYD 330
R PP TSL V NL PD LRR F ++GR+ D+YIPR+ YT E RGF FV+++D
Sbjct: 5 RPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHD 64
Query: 331 PADAADAKYHLDGYVLLGREITVVFAEENRKKPSEMRERSRGRTSTRSPYGYSRSPGYSR 510
DA DA +DG VL GRE+ V A R P + RG R YG S SR
Sbjct: 65 KRDAEDAMDAMDGAVLDGRELRVQMARYGR--PPDSHHSRRGPPPRR--YGSSGYGRRSR 120
Query: 511 SP-NYRRSYSRSPVYRRSYSRSPYDE-------RHRSRSVSPG-DRRRSYSRSSSRSRYE 663
SP RRS SRS RS SRS Y R RSRS S RRS S+SSS SR
Sbjct: 121 SPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKSRSARRSKSKSSSVSRSR 180
Query: 664 SRSQSPGYSR 693
SRS+S SR
Sbjct: 181 SRSRSRSRSR 190
>sp|Q3MHR5|SFRS2_BOVIN Splicing factor, arginine/serine-rich 2 OS=Bos taurus
GN=SFRS2 PE=2 SV=3
Length = 221
Score = 116 bits (288), Expect = 4e-025
Identities = 88/190 (46%), Positives = 101/190 (53%), Gaps = 18/190 (9%)
Frame = +1
Query: 166 RDPP-----TSLLVRNLRLDCRPDDLRRPFWRFGRLKDIYIPRNYYTGEPRGFGFVQYYD 330
R PP TSL V NL PD LRR F ++GR+ D+YIPR+ YT E RGF FV+++D
Sbjct: 5 RPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHD 64
Query: 331 PADAADAKYHLDGYVLLGREITVVFAEENRKKPSEMRERSRGRTSTRSPYGYSRSPGYSR 510
DA DA +DG VL GRE+ V A R P + RG R YG SR
Sbjct: 65 KRDAEDAMDAMDGAVLDGRELRVQMARYGR--PPDSHHSRRGPPPRR--YGGGGYGRRSR 120
Query: 511 SP-NYRRSYSRSPVYRRSYSRSPYDE-------RHRSRSVSPG-DRRRSYSRSSSRSRYE 663
SP RRS SRS RS SRS Y R RSRS S RRS S+SSS SR
Sbjct: 121 SPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKSRSARRSKSKSSSVSRSR 180
Query: 664 SRSQSPGYSR 693
SRS+S SR
Sbjct: 181 SRSRSRSRSR 190
>sp|Q01130|SFRS2_HUMAN Splicing factor, arginine/serine-rich 2 OS=Homo sapiens
GN=SFRS2 PE=1 SV=4
Length = 221
Score = 116 bits (288), Expect = 4e-025
Identities = 88/190 (46%), Positives = 101/190 (53%), Gaps = 18/190 (9%)
Frame = +1
Query: 166 RDPP-----TSLLVRNLRLDCRPDDLRRPFWRFGRLKDIYIPRNYYTGEPRGFGFVQYYD 330
R PP TSL V NL PD LRR F ++GR+ D+YIPR+ YT E RGF FV+++D
Sbjct: 5 RPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHD 64
Query: 331 PADAADAKYHLDGYVLLGREITVVFAEENRKKPSEMRERSRGRTSTRSPYGYSRSPGYSR 510
DA DA +DG VL GRE+ V A R P + RG R YG SR
Sbjct: 65 KRDAEDAMDAMDGAVLDGRELRVQMARYGR--PPDSHHSRRGPPPRR--YGGGGYGRRSR 120
Query: 511 SP-NYRRSYSRSPVYRRSYSRSPYDE-------RHRSRSVSPG-DRRRSYSRSSSRSRYE 663
SP RRS SRS RS SRS Y R RSRS S RRS S+SSS SR
Sbjct: 121 SPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKSRSARRSKSKSSSVSRSR 180
Query: 664 SRSQSPGYSR 693
SRS+S SR
Sbjct: 181 SRSRSRSRSR 190
>sp|Q62093|SFRS2_MOUSE Splicing factor, arginine/serine-rich 2 OS=Mus musculus
GN=Sfrs2 PE=1 SV=4
Length = 221
Score = 116 bits (288), Expect = 4e-025
Identities = 88/190 (46%), Positives = 101/190 (53%), Gaps = 18/190 (9%)
Frame = +1
Query: 166 RDPP-----TSLLVRNLRLDCRPDDLRRPFWRFGRLKDIYIPRNYYTGEPRGFGFVQYYD 330
R PP TSL V NL PD LRR F ++GR+ D+YIPR+ YT E RGF FV+++D
Sbjct: 5 RPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHD 64
Query: 331 PADAADAKYHLDGYVLLGREITVVFAEENRKKPSEMRERSRGRTSTRSPYGYSRSPGYSR 510
DA DA +DG VL GRE+ V A R P + RG R YG SR
Sbjct: 65 KRDAEDAMDAMDGAVLDGRELRVQMARYGR--PPDSHHSRRGPPPRR--YGGGGYGRRSR 120
Query: 511 SP-NYRRSYSRSPVYRRSYSRSPYDE-------RHRSRSVSPG-DRRRSYSRSSSRSRYE 663
SP RRS SRS RS SRS Y R RSRS S RRS S+SSS SR
Sbjct: 121 SPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKSRSARRSKSKSSSVSRSR 180
Query: 664 SRSQSPGYSR 693
SRS+S SR
Sbjct: 181 SRSRSRSRSR 190
>sp|Q5R1W5|SFRS2_PANTR Splicing factor, arginine/serine-rich 2 OS=Pan
troglodytes GN=SFRS2 PE=2 SV=3
Length = 221
Score = 116 bits (288), Expect = 4e-025
Identities = 88/190 (46%), Positives = 101/190 (53%), Gaps = 18/190 (9%)
Frame = +1
Query: 166 RDPP-----TSLLVRNLRLDCRPDDLRRPFWRFGRLKDIYIPRNYYTGEPRGFGFVQYYD 330
R PP TSL V NL PD LRR F ++GR+ D+YIPR+ YT E RGF FV+++D
Sbjct: 5 RPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHD 64
Query: 331 PADAADAKYHLDGYVLLGREITVVFAEENRKKPSEMRERSRGRTSTRSPYGYSRSPGYSR 510
DA DA +DG VL GRE+ V A R P + RG R YG SR
Sbjct: 65 KRDAEDAMDAMDGAVLDGRELRVQMARYGR--PPDSHHSRRGPPPRR--YGGGGYGRRSR 120
Query: 511 SP-NYRRSYSRSPVYRRSYSRSPYDE-------RHRSRSVSPG-DRRRSYSRSSSRSRYE 663
SP RRS SRS RS SRS Y R RSRS S RRS S+SSS SR
Sbjct: 121 SPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKSRSARRSKSKSSSVSRSR 180
Query: 664 SRSQSPGYSR 693
SRS+S SR
Sbjct: 181 SRSRSRSRSR 190
>sp|Q06A98|SFRS2_PIG Splicing factor, arginine/serine-rich 2 OS=Sus scrofa
GN=SFRS2 PE=2 SV=1
Length = 221
Score = 116 bits (288), Expect = 4e-025
Identities = 88/190 (46%), Positives = 101/190 (53%), Gaps = 18/190 (9%)
Frame = +1
Query: 166 RDPP-----TSLLVRNLRLDCRPDDLRRPFWRFGRLKDIYIPRNYYTGEPRGFGFVQYYD 330
R PP TSL V NL PD LRR F ++GR+ D+YIPR+ YT E RGF FV+++D
Sbjct: 5 RPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHD 64
Query: 331 PADAADAKYHLDGYVLLGREITVVFAEENRKKPSEMRERSRGRTSTRSPYGYSRSPGYSR 510
DA DA +DG VL GRE+ V A R P + RG R YG SR
Sbjct: 65 KRDAEDAMDAMDGAVLDGRELRVQMARYGR--PPDSHHSRRGPPPRR--YGGGGYGRRSR 120
Query: 511 SP-NYRRSYSRSPVYRRSYSRSPYDE-------RHRSRSVSPG-DRRRSYSRSSSRSRYE 663
SP RRS SRS RS SRS Y R RSRS S RRS S+SSS SR
Sbjct: 121 SPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKSRSARRSKSKSSSVSRSR 180
Query: 664 SRSQSPGYSR 693
SRS+S SR
Sbjct: 181 SRSRSRSRSR 190
Score = 54 bits (127), Expect = 2e-006
Identities = 38/88 (43%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Frame = +1
Query: 418 RKKPSEMRERSRGRTSTRSPYGYSRSPGYSRSPNYRRSYSRSPVYRRSYSRSPYDERHRS 597
R++ S R RSR R+ +RS YSRS SR+ + RS S+S RRS S+S R RS
Sbjct: 124 RRRRSRSRSRSRSRSRSRS--RYSRSKSRSRTRSRSRSTSKSRSARRSKSKSSSVSRSRS 181
Query: 598 RSVSPGDRRRSYSRSSSRSRYESRSQSP 681
RS S R S S+ SRS+SP
Sbjct: 182 RSRSRSRSRSPPPASKRESKSRSRSKSP 209
>sp|Q6PDU1|SFRS2_RAT Splicing factor, arginine/serine-rich 2 OS=Rattus
norvegicus GN=Sfrs2 PE=1 SV=3
Length = 221
Score = 116 bits (288), Expect = 4e-025
Identities = 88/190 (46%), Positives = 101/190 (53%), Gaps = 18/190 (9%)
Frame = +1
Query: 166 RDPP-----TSLLVRNLRLDCRPDDLRRPFWRFGRLKDIYIPRNYYTGEPRGFGFVQYYD 330
R PP TSL V NL PD LRR F ++GR+ D+YIPR+ YT E RGF FV+++D
Sbjct: 5 RPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHD 64
Query: 331 PADAADAKYHLDGYVLLGREITVVFAEENRKKPSEMRERSRGRTSTRSPYGYSRSPGYSR 510
DA DA +DG VL GRE+ V A R P + RG R YG SR
Sbjct: 65 KRDAEDAMDAMDGAVLDGRELRVQMARYGR--PPDSHHSRRGPPPRR--YGGGGYGRRSR 120
Query: 511 SP-NYRRSYSRSPVYRRSYSRSPYDE-------RHRSRSVSPG-DRRRSYSRSSSRSRYE 663
SP RRS SRS RS SRS Y R RSRS S RRS S+SSS SR
Sbjct: 121 SPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKSRSARRSKSKSSSVSRSR 180
Query: 664 SRSQSPGYSR 693
SRS+S SR
Sbjct: 181 SRSRSRSRSR 190
>sp|Q09511|RSP4_CAEEL Probable splicing factor, arginine/serine-rich 4
OS=Caenorhabditis elegans GN=rsp-4 PE=2 SV=1
Length = 196
Score = 111 bits (276), Expect = 1e-023
Identities = 75/177 (42%), Positives = 98/177 (55%), Gaps = 8/177 (4%)
Frame = +1
Query: 178 TSLLVRNLRLDCRPDDLRRPFWRFGRLKDIYIPRNYYTGEPRGFGFVQYYDPADAADAKY 357
TSL + NL P+DLRR F R+G + D++IPR+ Y+ + +GFGFV++Y+ DA A
Sbjct: 19 TSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALD 78
Query: 358 HLDGYVLLGREITVVFAEENRKKPSEM---RERSRGRTSTRSPYGYSRSPGY--SRSPNY 522
DG ++ GRE+ V A+ +R PS+ R GR +RSP SRSP Y SRSP
Sbjct: 79 RTDGKLVDGRELRVTLAKYDR--PSDERGGRGGGGGRRRSRSPRRRSRSPRYSRSRSPRR 136
Query: 523 RRSYSRSPVYRRSYSRSPYDERHRSRSVSPGDRRRSYSRSSSRSRYESRSQSPGYSR 693
RS +RSP R + RSRS SP R S RSR S S+SP SR
Sbjct: 137 SRSRTRSPPSRDRRDSPDRRDNSRSRSRSPPPREDG-SPKERRSRSRSASRSPSRSR 192
>sp|Q9BRL6|SFR2B_HUMAN Splicing factor, arginine/serine-rich 2B OS=Homo sapiens
GN=SFRS2B PE=1 SV=1
Length = 282
Score = 109 bits (270), Expect = 5e-023
Identities = 85/185 (45%), Positives = 99/185 (53%), Gaps = 15/185 (8%)
Frame = +1
Query: 169 DPPTSLLVRNLRLDCRPDDLRRPFWRFGRLKDIYIPRNYYTGEPRGFGFVQYYDPADAAD 348
D +L V NL PD LRR F ++GR+ D+YIPR +T PRGF FV+++D DA D
Sbjct: 11 DGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQD 70
Query: 349 AKYHLDGYVLLGREITVVFAEENRK-----KPSEMRERSRGRTSTRSPYGYSRSPGYSRS 513
A+ +DG L GRE+ V A R+ + E R RSRG R Y R SRS
Sbjct: 71 AEAAMDGAELDGRELRVQVARYGRRDLPRSRQGEPRGRSRGGGYGRRSRSYGRR---SRS 127
Query: 514 PNYR-RSYSRSPVYRRSYSRSPYDERHRSRSV---SPGDRRRSYSRSS-SRSRY-ESRSQ 675
P R RS SR P RS SRS Y SRS SP R R YSRS SRSRY ESR
Sbjct: 128 PRRRHRSRSRGPSCSRSRSRSRYRGSRYSRSPYSRSPYSRSR-YSRSPYSRSRYRESRYG 186
Query: 676 SPGYS 690
YS
Sbjct: 187 GSHYS 191
>sp|Q9UQ35|SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 OS=Homo
sapiens GN=SRRM2 PE=1 SV=2
Length = 2752
Score = 62 bits (148), Expect = 7e-009
Identities = 44/100 (44%), Positives = 54/100 (54%), Gaps = 7/100 (7%)
Frame = +1
Query: 382 GREITVVFAEENRKKPSEMRERSRGRTSTRSPYGYSRSPGYSRSPNYRRSYSRSPVYRRS 561
GR + A + + R RSR RT R R SR+P RRS +RSPV RRS
Sbjct: 582 GRSRSRTPARRRSRSRTPTRRRSRSRTPAR------RGRSRSRTPARRRSRTRSPVRRRS 635
Query: 562 YSRSPYDERHRSRSVSPGDRRRSYSRSSSRSRYESRSQSP 681
SRSP RSRS +P R RS SR+ +R R SRS++P
Sbjct: 636 RSRSPARRSGRSRSRTPARRGRSRSRTPAR-RGRSRSRTP 674
>sp|P78795|EIF3G_SCHPO Eukaryotic translation initiation factor 3 subunit G
OS=Schizosaccharomyces pombe GN=tif35 PE=1 SV=2
Length = 282
Score = 61 bits (146), Expect = 1e-008
Identities = 31/71 (43%), Positives = 42/71 (59%)
Frame = +1
Query: 160 RSRDPPTSLLVRNLRLDCRPDDLRRPFWRFGRLKDIYIPRNYYTGEPRGFGFVQYYDPAD 339
R RD +L V NL D R ++LR F RFG ++ +Y+ ++ TG +GF FV YYD
Sbjct: 196 RERDDSATLRVTNLSDDTREEELRDLFRRFGGIQRVYLAKDKETGRAKGFAFVSYYDRDC 255
Query: 340 AADAKYHLDGY 372
A A+ LDGY
Sbjct: 256 AIKARDRLDGY 266
>sp|Q4P7G1|EIF3G_USTMA Eukaryotic translation initiation factor 3 subunit G
OS=Ustilago maydis GN=TIF35 PE=3 SV=1
Length = 308
Score = 59 bits (140), Expect = 6e-008
Identities = 35/90 (38%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Frame = +1
Query: 109 PPRRRYRSPSP---VGHYRGRSRDPPTSLLVRNLRLDCRPDDLRRPFWRFGRLKDIYIPR 279
PP R + P +G G SRD +L V NL D DDLR F RFGR+ +Y+ R
Sbjct: 199 PPSMRGGAKGPGEKMGGLGGMSRDDLPTLRVTNLSEDADDDDLRELFMRFGRVVRVYVGR 258
Query: 280 NYYTGEPRGFGFVQYYDPADAADAKYHLDG 369
+ TG +G+ FV + + DA A+ +DG
Sbjct: 259 DRETGICKGYAFVSFENREDADRARQKVDG 288
>sp|Q44560|RBPA_ANASP Putative RNA-binding protein rbpA OS=Anabaena sp. (strain
PCC 7120) GN=rbpA PE=3 SV=3
Length = 102
Score = 58 bits (138), Expect = 1e-007
Identities = 35/92 (38%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Frame = +1
Query: 181 SLLVRNLRLDCRPDDLRRPFWRFGRLKDIYIPRNYYTGEPRGFGFVQYYDPADAADAKYH 360
S+ V NL + D L F +G +K + +P + TG+PRGFGFV+ A+ A A
Sbjct: 2 SIYVGNLSYEVTQDTLSAVFAEYGTVKRVQLPTDRETGQPRGFGFVEMGSEAEEAAAIEA 61
Query: 361 LDGYVLLGREITVVFAEENRKKPSEMRERSRG 456
LDG +GR++ V N+ KP E R S G
Sbjct: 62 LDGAEWMGRDLKV-----NKAKPREDRGPSGG 88
>sp|Q6C747|EIF3G_YARLI Eukaryotic translation initiation factor 3 subunit G
OS=Yarrowia lipolytica GN=TIF35 PE=3 SV=1
Length = 294
Score = 57 bits (136), Expect = 2e-007
Identities = 35/93 (37%), Positives = 48/93 (51%), Gaps = 5/93 (5%)
Frame = +1
Query: 109 PPRRRYRSP----SPVGHYRGRS-RDPPTSLLVRNLRLDCRPDDLRRPFWRFGRLKDIYI 273
PP R + P P G GRS D +L V NL + DDLRR F ++G + +Y+
Sbjct: 186 PPHLRNKGPGGPGGPGGAAGGRSDDDDELTLRVTNLSEEATDDDLRRMFGKYGMINRVYV 245
Query: 274 PRNYYTGEPRGFGFVQYYDPADAADAKYHLDGY 372
++ TG PRGF FV Y + A A +DG+
Sbjct: 246 AKDRDTGRPRGFAFVTYTLKSHAQAALEAMDGH 278
>sp|Q54PB2|MRD1_DICDI Multiple RNA-binding domain-containing protein 1
OS=Dictyostelium discoideum GN=mrd1 PE=3 SV=1
Length = 895
Score = 54 bits (129), Expect = 1e-006
Identities = 26/73 (35%), Positives = 43/73 (58%)
Frame = +1
Query: 184 LLVRNLRLDCRPDDLRRPFWRFGRLKDIYIPRNYYTGEPRGFGFVQYYDPADAADAKYHL 363
+ VRNL + +DL + F +FG++ +I+IP +Y + + +G F+ Y P +A A +
Sbjct: 363 IFVRNLSYSTKEEDLEKVFSKFGKISEIHIPIDYDSKKSKGIAFILYLIPENAVQALNDM 422
Query: 364 DGYVLLGREITVV 402
DG V GR I V+
Sbjct: 423 DGKVFQGRLIHVL 435
>sp|Q18409|RSP6_CAEEL Probable splicing factor, arginine/serine-rich 6
OS=Caenorhabditis elegans GN=rsp-6 PE=1 SV=1
Length = 179
Score = 54 bits (127), Expect = 2e-006
Identities = 37/76 (48%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Frame = +1
Query: 451 RGRTSTRSPYGYSRSPGYSRSPNYRRSYSRSPVYRRSYSRSPYDERHRSRSVSPGDRRRS 630
RGR+ +R SR G RS + R SR RS RS ER RSRS SP +R RS
Sbjct: 105 RGRSRSR-----SRDRGRDRSRDRSRDRSRDRSRDRSRERSRERERTRSRSRSPQERDRS 159
Query: 631 YSRSSSRSRYESRSQS 678
+S+S SRSR SRS+S
Sbjct: 160 HSKSRSRSRSRSRSRS 175
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,851,905,190
Number of Sequences: 518415
Number of Extensions: 48851905190
Number of Successful Extensions: 346316827
Number of sequences better than 0.0: 0
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