BLASTX 7.6.2
Query= UN12200 /QuerySize=986
(985 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G13570.1 | Symbols: SCL30A | SCL30a; RNA bindi... 230 1e-060
TAIR9_protein||AT1G55310.1 | Symbols: SR33, ATSCL33, SCL33 | SR3... 227 1e-059
TAIR9_protein||AT1G55310.2 | Symbols: SR33, ATSCL33, SCL33 | SR3... 227 1e-059
TAIR9_protein||AT3G55460.1 | Symbols: SCL30 | SCL30; RNA binding... 164 7e-041
TAIR9_protein||AT5G18810.1 | Symbols: SCL28 | SCL28; RNA binding... 152 5e-037
TAIR9_protein||AT5G64200.1 | Symbols: ATSC35, SC35 | ATSC35; RNA... 100 2e-021
TAIR9_protein||AT5G64200.2 | Symbols: ATSC35, SC35 | ATSC35; RNA... 100 2e-021
TAIR9_protein||AT1G07350.1 | Symbols: | transformer serine/argi... 83 3e-016
TAIR9_protein||AT3G08000.1 | Symbols: | RNA-binding protein, pu... 52 4e-007
TAIR9_protein||AT1G07350.2 | Symbols: | transformer serine/argi... 49 4e-006
TAIR9_protein||AT2G37340.2 | Symbols: RSZ33 | RSZ33; nucleic aci... 49 4e-006
TAIR9_protein||AT2G37340.3 | Symbols: RSZ33 | RSZ33; nucleic aci... 49 4e-006
TAIR9_protein||AT2G37340.1 | Symbols: RSZ33, ATRSZ33 | RSZ33; nu... 49 4e-006
TAIR9_protein||AT3G11400.1 | Symbols: EIF3G1, ATEIF3G1 | eukaryo... 49 4e-006
TAIR9_protein||AT3G11400.2 | Symbols: EIF3G1, ATEIF3G1 | eukaryo... 49 4e-006
TAIR9_protein||AT4G13860.1 | Symbols: | glycine-rich RNA-bindin... 49 6e-006
>TAIR9_protein||AT3G13570.1 | Symbols: SCL30A | SCL30a; RNA binding / nucleic
acid binding / nucleotide binding | chr3:4429564-4431602 REVERSE
Length = 263
Score = 230 bits (586), Expect = 1e-060
Identities = 129/208 (62%), Positives = 149/208 (71%), Gaps = 10/208 (4%)
Frame = +1
Query: 85 RSYSYSPSPPR---RRYRSPSPVGHYRG-RSRDPPTSLLVRNLRLDCRPDDLRRPFWRFG 252
R SY+PSPPR RR RSPSP G + G R D PTSLLVRNLR DCR +DLRRPF +FG
Sbjct: 2 RGRSYTPSPPRGYGRRGRSPSPRGRFGGSRDSDLPTSLLVRNLRHDCRQEDLRRPFEQFG 61
Query: 253 RLKDIYIPRNYYTGEPRGFGFVQYYDPADAADAKYHLDGYVLLGREITVVFAEENRKKPS 432
+KDIY+PR+YYTG+PRGFGF+Q+ DPADAA+AK+ +DGY+LLGRE+TVVFAEENRKKP+
Sbjct: 62 PVKDIYLPRDYYTGDPRGFGFIQFMDPADAAEAKHQMDGYLLLGRELTVVFAEENRKKPT 121
Query: 433 EMRERSRGRTSTRSPYGYSRSPGYSRSPNYRRSYSRSPVYRRSYSRSPYDERHRSRSVSP 612
EMR R RG S R P YSRSP RR RS R Y+ SP +RH+SRSVSP
Sbjct: 122 EMRTRDRGGRSNRFQDRRRSPPRYSRSPPPRRG-RRSRSRSRGYN-SPPAKRHQSRSVSP 179
Query: 613 GDRR----RSYSRSSSRSRYESRSQSPG 684
DRR RSYSRS + RS SPG
Sbjct: 180 QDRRYEKERSYSRSPPHNGSRVRSGSPG 207
>TAIR9_protein||AT1G55310.1 | Symbols: SR33, ATSCL33, SCL33 | SR33; RNA binding
/ protein binding | chr1:20630676-20632695 FORWARD
Length = 288
Score = 227 bits (577), Expect = 1e-059
Identities = 129/211 (61%), Positives = 146/211 (69%), Gaps = 19/211 (9%)
Frame = +1
Query: 85 RSYSYSPSPPR---RRYRSPSPVGHYRGRSRDPPTSLLVRNLRLDCRPDDLRRPFWRFGR 255
R SY+PSPPR RR RSPSP G Y GRSRD PTSLLVRNLR DCR +DLR+ F +FG
Sbjct: 2 RGRSYTPSPPRGYGRRGRSPSPRGRYGGRSRDLPTSLLVRNLRHDCRQEDLRKSFEQFGP 61
Query: 256 LKDIYIPRNYYTGEPRGFGFVQYYDPADAADAKYHLDGYVLLGREITVVFAEENRKKPSE 435
+KDIY+PR+YYTG+PRGFGFVQ+ DPADAADAK+H+DGY+LLGRE+TVVFAEENRKKP+E
Sbjct: 62 VKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFAEENRKKPTE 121
Query: 436 MRERSRGRTSTRS-----PYGYSRSPGYSRSPNYRRSYSRSPVYRRSYSRSPYDERHRSR 600
MR R RG R P YSR SRSP RR SRS R SP RH R
Sbjct: 122 MRARERGGGRFRDRRRTPPRYYSR----SRSPPPRRGRSRS---RSGDYYSPPPRRHHPR 174
Query: 601 SVSPG----DRRRSYSRSSSRSRYESRSQSP 681
S+SP D RRSYSRS + RS +P
Sbjct: 175 SISPREERYDGRRSYSRSPASDGSRGRSLTP 205
>TAIR9_protein||AT1G55310.2 | Symbols: SR33, ATSCL33, SCL33 | SR33; RNA binding
/ protein binding | chr1:20630676-20632567 FORWARD
Length = 221
Score = 227 bits (577), Expect = 1e-059
Identities = 129/211 (61%), Positives = 146/211 (69%), Gaps = 19/211 (9%)
Frame = +1
Query: 85 RSYSYSPSPPR---RRYRSPSPVGHYRGRSRDPPTSLLVRNLRLDCRPDDLRRPFWRFGR 255
R SY+PSPPR RR RSPSP G Y GRSRD PTSLLVRNLR DCR +DLR+ F +FG
Sbjct: 2 RGRSYTPSPPRGYGRRGRSPSPRGRYGGRSRDLPTSLLVRNLRHDCRQEDLRKSFEQFGP 61
Query: 256 LKDIYIPRNYYTGEPRGFGFVQYYDPADAADAKYHLDGYVLLGREITVVFAEENRKKPSE 435
+KDIY+PR+YYTG+PRGFGFVQ+ DPADAADAK+H+DGY+LLGRE+TVVFAEENRKKP+E
Sbjct: 62 VKDIYLPRDYYTGDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFAEENRKKPTE 121
Query: 436 MRERSRGRTSTRS-----PYGYSRSPGYSRSPNYRRSYSRSPVYRRSYSRSPYDERHRSR 600
MR R RG R P YSR SRSP RR SRS R SP RH R
Sbjct: 122 MRARERGGGRFRDRRRTPPRYYSR----SRSPPPRRGRSRS---RSGDYYSPPPRRHHPR 174
Query: 601 SVSPG----DRRRSYSRSSSRSRYESRSQSP 681
S+SP D RRSYSRS + RS +P
Sbjct: 175 SISPREERYDGRRSYSRSPASDGSRGRSLTP 205
>TAIR9_protein||AT3G55460.1 | Symbols: SCL30 | SCL30; RNA binding / nucleic acid
binding / nucleotide binding | chr3:20561024-20563502 FORWARD
Length = 263
Score = 164 bits (415), Expect = 7e-041
Identities = 101/203 (49%), Positives = 124/203 (61%), Gaps = 12/203 (5%)
Frame = +1
Query: 82 GRSYSYSPSPPRRRYRSPSPVGHYRGRSRDPPTSLLVRNLRLDCRPDDLRRPFWRFGRLK 261
GR S P PPRR Y G RG S SLLVRN+ LDCRP++LR PF RFG ++
Sbjct: 18 GRGRSPPPPPPRRGYGGGGGGGGRRGSSHG---SLLVRNIPLDCRPEELREPFERFGPVR 74
Query: 262 DIYIPRNYYTGEPRGFGFVQYYDPADAADAKYHLDGYVLLGREITVVFAEENRKKPSEMR 441
D+YIPR+YY+G+PRGF FV++ D DA +A+ ++ GREITVV A E+RK+P EMR
Sbjct: 75 DVYIPRDYYSGQPRGFAFVEFVDAYDAGEAQRSMNRRSFAGREITVVVASESRKRPEEMR 134
Query: 442 ERSRGRTSTRSPYGYSRSPGYSRSPNYRRSYSRSPVYRRSYSRSPYDERHRSRSVSPGDR 621
++ RT +R P G SR + RS + S SRSP R S SRS R+RSRS SP R
Sbjct: 135 VKT--RTRSREPSG-SRDRSHGRSRSRSISRSRSP-RRPSDSRS----RYRSRSYSPAPR 186
Query: 622 RR-SYSRSSSRSRYESRSQSPGY 687
RR R Y RS SPGY
Sbjct: 187 RRGGPPRGEEDENYSRRSYSPGY 209
>TAIR9_protein||AT5G18810.1 | Symbols: SCL28 | SCL28; RNA binding / nucleic acid
binding / nucleotide binding | chr5:6268925-6271158 REVERSE
Length = 237
Score = 152 bits (382), Expect = 5e-037
Identities = 107/225 (47%), Positives = 121/225 (53%), Gaps = 29/225 (12%)
Frame = +1
Query: 85 RSYSYSP-----SPPRRRYRSPSPVGHYRGRSRD----PPTSLLVRNLRLDCRPDDLRRP 237
RS SYSP SPPR R R SRD P+ LL+RNL LD RP+DLR
Sbjct: 7 RSRSYSPRPRDRSPPRERKGYDDNRLRERPSSRDHESSGPSGLLIRNLPLDARPNDLRDS 66
Query: 238 FWRFGRLKDIYIPRNYYTGEPRGFGFVQYYDPADAADAKYHLDGYVLLGREITVVFAEEN 417
F RFG LKDIY+PRNYYTGEPRGFGFV+Y DAA+A ++ V+ GREI +VFAEEN
Sbjct: 67 FERFGPLKDIYLPRNYYTGEPRGFGFVKYRYAEDAAEAMKRMNHKVIGGREIAIVFAEEN 126
Query: 418 RKKPSEMRERS--------RGRTSTRSPYGYSRSPGYSRSPNYRRSYSRSPVYRRSYSRS 573
RK P EMR + RTS RSP RS SRSP R S R S R
Sbjct: 127 RKTPQEMRTTNGTSGRHGDYKRTSHRSPRRRYRSHSRSRSPPRRES-------RHSKVRE 179
Query: 574 P--YDERHRSRSVSPGD---RRRSYSRSSSRSRYESRSQSPGYSR 693
Y R RSRS+S R Y + RS E R +P SR
Sbjct: 180 DDLYSPRRRSRSISRSPLPRNEREYKSRNCRSPREERVLTPIRSR 224
>TAIR9_protein||AT5G64200.1 | Symbols: ATSC35, SC35 | ATSC35; RNA binding /
nucleic acid binding / nucleotide binding | chr5:25681849-25683553
REVERSE
Length = 304
Score = 100 bits (247), Expect = 2e-021
Identities = 82/194 (42%), Positives = 102/194 (52%), Gaps = 18/194 (9%)
Frame = +1
Query: 157 GRSRDPPT----SLLVRNLRLDCRPDDLRRPFWRFGRLKDIYIPRNYYTGEPRGFGFVQY 324
GRS P SLLV N+ DDL F ++G++ D++IPR+ TG+ RGF FV+Y
Sbjct: 5 GRSGPPDISDTYSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
Query: 325 YDPADAADAKYHLDGYVLLGREITVVFAE--ENRKKPSEMR-----ERSRGRTSTRSPYG 483
+A A LDG V+ GREITV FA+ N +K S+ R +SR R+ +RSP
Sbjct: 65 KYKDEAHKAVERLDGRVVDGREITVQFAKYGPNAEKISKGRVVEPPPKSR-RSRSRSP-R 122
Query: 484 YSRSPGYSRSPNYRRSYSRSPVYRR----SYSRSPYDERHRSRSVSPGDRRRSYSRSSSR 651
SRSP SRSP RRS RS RR Y Y +R RSRS +R R R
Sbjct: 123 RSRSPRRSRSPPRRRSPRRSRSPRRRSRDDYREKDYRKRSRSRSYDRRERHEEKDR-DHR 181
Query: 652 SRYESRSQSPGYSR 693
R SRS SP R
Sbjct: 182 RRTRSRSASPDEKR 195
>TAIR9_protein||AT5G64200.2 | Symbols: ATSC35, SC35 | ATSC35; RNA binding /
nucleic acid binding / nucleotide binding | chr5:25681849-25683553
REVERSE
Length = 304
Score = 100 bits (247), Expect = 2e-021
Identities = 82/194 (42%), Positives = 102/194 (52%), Gaps = 18/194 (9%)
Frame = +1
Query: 157 GRSRDPPT----SLLVRNLRLDCRPDDLRRPFWRFGRLKDIYIPRNYYTGEPRGFGFVQY 324
GRS P SLLV N+ DDL F ++G++ D++IPR+ TG+ RGF FV+Y
Sbjct: 5 GRSGPPDISDTYSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRY 64
Query: 325 YDPADAADAKYHLDGYVLLGREITVVFAE--ENRKKPSEMR-----ERSRGRTSTRSPYG 483
+A A LDG V+ GREITV FA+ N +K S+ R +SR R+ +RSP
Sbjct: 65 KYKDEAHKAVERLDGRVVDGREITVQFAKYGPNAEKISKGRVVEPPPKSR-RSRSRSP-R 122
Query: 484 YSRSPGYSRSPNYRRSYSRSPVYRR----SYSRSPYDERHRSRSVSPGDRRRSYSRSSSR 651
SRSP SRSP RRS RS RR Y Y +R RSRS +R R R
Sbjct: 123 RSRSPRRSRSPPRRRSPRRSRSPRRRSRDDYREKDYRKRSRSRSYDRRERHEEKDR-DHR 181
Query: 652 SRYESRSQSPGYSR 693
R SRS SP R
Sbjct: 182 RRTRSRSASPDEKR 195
>TAIR9_protein||AT1G07350.1 | Symbols: | transformer serine/arginine-rich
ribonucleoprotein, putative | chr1:2257732-2260101 REVERSE
Length = 383
Score = 83 bits (203), Expect = 3e-016
Identities = 83/224 (37%), Positives = 98/224 (43%), Gaps = 33/224 (14%)
Frame = +1
Query: 88 SYSYSPSPPRR-----RYRSPSPVGHYRGRSRDPPTSLLVRNLRLDCRPDDLRRPFWRFG 252
S S SP RR R S SP + +P SL V L DL F + G
Sbjct: 40 SPSLSPYDKRRGRSVSRSLSRSPTRSVSSDAENPGNSLYVTGLSHRVTERDLEDHFAKEG 99
Query: 253 RLKDIYIPRNYYTGEPRGFGFVQYYDPADAADAKYHLDGYVLLGREITVVFAEENRKKPS 432
++ D+++ + +T E RGFGF+ DA LD VL GR ITV
Sbjct: 100 KVTDVHLVLDPWTRESRGFGFISMKSVGDANRCIRSLDHSVLQGRVITV----------- 148
Query: 433 EMRERSRGRTSTRSPY-------GYSRSPGYS--RSPNYRRSYSRSPVYRRSYSRSP-YD 582
E R RGRT T Y G +SP YS RS + RS SRS R S SP Y
Sbjct: 149 EKARRRRGRTPTPGKYLGLRTARGRHKSPSYSPRRSVSCSRSRSRSYSSDRGRSYSPSYG 208
Query: 583 ERHRSRSVSPGDRRRSY---SRSSS----RSRYESRSQSPGYSR 693
R RS S SP RRR + SRS S +R RS SP Y R
Sbjct: 209 RRGRSSSYSPFYRRRRFYSPSRSPSPDDRYNRRRDRSYSPYYRR 252
>TAIR9_protein||AT3G08000.1 | Symbols: | RNA-binding protein, putative |
chr3:2555034-2555829 REVERSE
Length = 144
Score = 52 bits (124), Expect = 4e-007
Identities = 29/84 (34%), Positives = 42/84 (50%)
Frame = +1
Query: 163 SRDPPTSLLVRNLRLDCRPDDLRRPFWRFGRLKDIYIPRNYYTGEPRGFGFVQYYDPADA 342
S P + L + L L+ F FG + ++ I + +G RGFGFV + + DA
Sbjct: 36 SASPSSKLFIGGLSWSVDEQSLKDAFSSFGEVAEVRIAYDKGSGRSRGFGFVDFAEEGDA 95
Query: 343 ADAKYHLDGYVLLGREITVVFAEE 414
AK +DG LLGR + + FA E
Sbjct: 96 LSAKDAMDGKGLLGRPLRISFALE 119
>TAIR9_protein||AT1G07350.2 | Symbols: | transformer serine/arginine-rich
ribonucleoprotein, putative | chr1:2258816-2259586 REVERSE
Length = 130
Score = 49 bits (115), Expect = 4e-006
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 5/109 (4%)
Frame = +1
Query: 88 SYSYSPSPPRR-----RYRSPSPVGHYRGRSRDPPTSLLVRNLRLDCRPDDLRRPFWRFG 252
S S SP RR R S SP + +P SL V L DL F + G
Sbjct: 10 SPSLSPYDKRRGRSVSRSLSRSPTRSVSSDAENPGNSLYVTGLSHRVTERDLEDHFAKEG 69
Query: 253 RLKDIYIPRNYYTGEPRGFGFVQYYDPADAADAKYHLDGYVLLGREITV 399
++ D+++ + +T E RGFGF+ DA LD VL GR ITV
Sbjct: 70 KVTDVHLVLDPWTRESRGFGFISMKSVGDANRCIRSLDHSVLQGRVITV 118
>TAIR9_protein||AT2G37340.2 | Symbols: RSZ33 | RSZ33; nucleic acid binding /
zinc ion binding | chr2:15670372-15671477 REVERSE
Length = 261
Score = 49 bits (115), Expect = 4e-006
Identities = 33/66 (50%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +1
Query: 484 YSRSPGYSRSPNYRRSYSRSPVYRRSYSRSPYDERHRSRSVSPGDRRRSYSRSSSRSRYE 663
YSRSP SRSP RRS SRS RSYSRS R R RSV +R RS R
Sbjct: 119 YSRSPVRSRSPRRRRSPSRSLSRSRSYSRSRSPVRRRERSVE--ERSRSPKRMDDSLSPR 176
Query: 664 SRSQSP 681
+R +SP
Sbjct: 177 ARDRSP 182
>TAIR9_protein||AT2G37340.3 | Symbols: RSZ33 | RSZ33; nucleic acid binding /
nucleotide binding / zinc ion binding | chr2:15670372-15671584 REVERSE
Length = 250
Score = 49 bits (115), Expect = 4e-006
Identities = 33/66 (50%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +1
Query: 484 YSRSPGYSRSPNYRRSYSRSPVYRRSYSRSPYDERHRSRSVSPGDRRRSYSRSSSRSRYE 663
YSRSP SRSP RRS SRS RSYSRS R R RSV +R RS R
Sbjct: 108 YSRSPVRSRSPRRRRSPSRSLSRSRSYSRSRSPVRRRERSVE--ERSRSPKRMDDSLSPR 165
Query: 664 SRSQSP 681
+R +SP
Sbjct: 166 ARDRSP 171
>TAIR9_protein||AT2G37340.1 | Symbols: RSZ33, ATRSZ33 | RSZ33; nucleic acid
binding / nucleotide binding / zinc ion binding |
chr2:15670372-15672331 REVERSE
Length = 291
Score = 49 bits (115), Expect = 4e-006
Identities = 33/66 (50%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +1
Query: 484 YSRSPGYSRSPNYRRSYSRSPVYRRSYSRSPYDERHRSRSVSPGDRRRSYSRSSSRSRYE 663
YSRSP SRSP RRS SRS RSYSRS R R RSV +R RS R
Sbjct: 149 YSRSPVRSRSPRRRRSPSRSLSRSRSYSRSRSPVRRRERSVE--ERSRSPKRMDDSLSPR 206
Query: 664 SRSQSP 681
+R +SP
Sbjct: 207 ARDRSP 212
>TAIR9_protein||AT3G11400.1 | Symbols: EIF3G1, ATEIF3G1 | eukaryotic translation
initiation factor 3G / eIF3g | chr3:3578536-3580366 FORWARD
Length = 295
Score = 49 bits (115), Expect = 4e-006
Identities = 28/71 (39%), Positives = 36/71 (50%)
Frame = +1
Query: 160 RSRDPPTSLLVRNLRLDCRPDDLRRPFWRFGRLKDIYIPRNYYTGEPRGFGFVQYYDPAD 339
R R+ S+ V NL D R DL F FG + +Y+ + TG RGFGFV + D
Sbjct: 207 RRRNDENSVRVTNLSEDTREPDLMELFHPFGAVTRVYVAIDQKTGVSRGFGFVNFVSRED 266
Query: 340 AADAKYHLDGY 372
A A L+GY
Sbjct: 267 AQRAINKLNGY 277
>TAIR9_protein||AT3G11400.2 | Symbols: EIF3G1, ATEIF3G1 | eukaryotic translation
initiation factor 3G / eIF3g | chr3:3578536-3580366 FORWARD
Length = 322
Score = 49 bits (115), Expect = 4e-006
Identities = 28/71 (39%), Positives = 36/71 (50%)
Frame = +1
Query: 160 RSRDPPTSLLVRNLRLDCRPDDLRRPFWRFGRLKDIYIPRNYYTGEPRGFGFVQYYDPAD 339
R R+ S+ V NL D R DL F FG + +Y+ + TG RGFGFV + D
Sbjct: 234 RRRNDENSVRVTNLSEDTREPDLMELFHPFGAVTRVYVAIDQKTGVSRGFGFVNFVSRED 293
Query: 340 AADAKYHLDGY 372
A A L+GY
Sbjct: 294 AQRAINKLNGY 304
>TAIR9_protein||AT4G13860.1 | Symbols: | glycine-rich RNA-binding protein,
putative | chr4:8022601-8023162 FORWARD
Length = 88
Score = 49 bits (114), Expect = 6e-006
Identities = 28/74 (37%), Positives = 38/74 (51%)
Frame = +1
Query: 178 TSLLVRNLRLDCRPDDLRRPFWRFGRLKDIYIPRNYYTGEPRGFGFVQYYDPADAADAKY 357
T + V NL D LR F +G + D + R+ YT RGFGFV Y ++A A
Sbjct: 3 TRVYVGNLSPTTTDDMLREAFSGYGNVVDAIVMRDRYTDRSRGFGFVTYSSHSEAEAAVS 62
Query: 358 HLDGYVLLGREITV 399
+DG L GR ++V
Sbjct: 63 GMDGKELNGRRVSV 76
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,539,899,727
Number of Sequences: 33410
Number of Extensions: 6539899727
Number of Successful Extensions: 227121966
Number of sequences better than 0.0: 0
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