BLASTX 7.6.2
Query= UN12295 /QuerySize=778
(777 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|89257658|gb|ABD65145.1| nuclear RNA binding protein, putative... 114 1e-023
gi|89257578|gb|ABD65067.1| nuclear RNA binding protein, putative... 103 4e-020
gi|15236552|ref|NP_193485.1| plasminogen activator inhibitor 1 R... 81 2e-013
gi|21593013|gb|AAM64962.1| nuclear RNA binding protein A-like pr... 81 2e-013
gi|297804430|ref|XP_002870099.1| hypothetical protein ARALYDRAFT... 81 2e-013
gi|195604856|gb|ACG24258.1| plasminogen activator inhibitor 1 RN... 80 4e-013
gi|89257422|gb|ABD64914.1| nuclear RNA binding protein, putative... 79 5e-013
gi|297790933|ref|XP_002863351.1| hypothetical protein ARALYDRAFT... 70 4e-010
gi|89257548|gb|ABD65038.1| nuclear RNA binding protein, putative... 63 4e-008
gi|242057933|ref|XP_002458112.1| hypothetical protein SORBIDRAFT... 57 3e-006
>gi|89257658|gb|ABD65145.1| nuclear RNA binding protein, putative [Brassica
oleracea]
Length = 353
Score = 114 bits (285), Expect = 1e-023
Identities = 55/59 (93%), Positives = 56/59 (94%)
Frame = -1
Query: 177 MATVNPFDLLDDDTKDLHKLVAAKPLKVEKPAPVQPGKLPTKPLPPSQAVREGKNGPGG 1
MATVNPFDLLDDDT+DLHKLVAAKPLK EK APVQ GKLPTKPLPPSQAVREGKNGPGG
Sbjct: 1 MATVNPFDLLDDDTEDLHKLVAAKPLKSEKTAPVQLGKLPTKPLPPSQAVREGKNGPGG 59
Score = 91 bits (224), Expect = 2e-016
Identities = 44/47 (93%)
Frame = -2
Query: 533 MATVNPFDLLDDDTEDLHKLVAAKPLKVEKPAPVQPGKLPTKPLPPS 393
MATVNPFDLLDDDTEDLHKLVAAKPLK EK APVQ GKLPTKPLPPS
Sbjct: 1 MATVNPFDLLDDDTEDLHKLVAAKPLKSEKTAPVQLGKLPTKPLPPS 47
>gi|89257578|gb|ABD65067.1| nuclear RNA binding protein, putative [Brassica
oleracea]
Length = 367
Score = 103 bits (255), Expect = 4e-020
Identities = 48/59 (81%), Positives = 52/59 (88%)
Frame = -1
Query: 177 MATVNPFDLLDDDTKDLHKLVAAKPLKVEKPAPVQPGKLPTKPLPPSQAVREGKNGPGG 1
MAT+NPFDLLDDD +D +L AAKPLKVEK AP QP KLP+KPLPPSQAVREGKNGPGG
Sbjct: 1 MATLNPFDLLDDDAEDPSQLAAAKPLKVEKAAPAQPAKLPSKPLPPSQAVREGKNGPGG 59
Score = 79 bits (194), Expect = 5e-013
Identities = 37/47 (78%), Positives = 40/47 (85%)
Frame = -2
Query: 533 MATVNPFDLLDDDTEDLHKLVAAKPLKVEKPAPVQPGKLPTKPLPPS 393
MAT+NPFDLLDDD ED +L AAKPLKVEK AP QP KLP+KPLPPS
Sbjct: 1 MATLNPFDLLDDDAEDPSQLAAAKPLKVEKAAPAQPAKLPSKPLPPS 47
>gi|15236552|ref|NP_193485.1| plasminogen activator inhibitor 1 RNA-binding
protein [Arabidopsis thaliana]
Length = 360
Score = 81 bits (198), Expect = 2e-013
Identities = 39/60 (65%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Frame = -1
Query: 177 MATVNPFDLLDDDTKDLHKLVAAKPLKVEKPA-PVQPGKLPTKPLPPSQAVREGKNGPGG 1
MA+VNPFDLLDDD +D ++VA+KPLKV P + GK+PTKP PPSQAVRE +N PGG
Sbjct: 1 MASVNPFDLLDDDAEDPSQIVASKPLKVVAPVQTAKSGKMPTKPPPPSQAVREARNAPGG 60
Score = 63 bits (152), Expect = 4e-008
Identities = 31/48 (64%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Frame = -2
Query: 533 MATVNPFDLLDDDTEDLHKLVAAKPLKVEKPA-PVQPGKLPTKPLPPS 393
MA+VNPFDLLDDD ED ++VA+KPLKV P + GK+PTKP PPS
Sbjct: 1 MASVNPFDLLDDDAEDPSQIVASKPLKVVAPVQTAKSGKMPTKPPPPS 48
>gi|21593013|gb|AAM64962.1| nuclear RNA binding protein A-like protein
[Arabidopsis thaliana]
Length = 360
Score = 81 bits (198), Expect = 2e-013
Identities = 39/60 (65%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Frame = -1
Query: 177 MATVNPFDLLDDDTKDLHKLVAAKPLKVEKPA-PVQPGKLPTKPLPPSQAVREGKNGPGG 1
MA+VNPFDLLDDD +D ++VA+KPLKV P + GK+PTKP PPSQAVRE +N PGG
Sbjct: 1 MASVNPFDLLDDDAEDPSQIVASKPLKVVAPVQTAKSGKMPTKPPPPSQAVREARNAPGG 60
Score = 63 bits (152), Expect = 4e-008
Identities = 31/48 (64%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Frame = -2
Query: 533 MATVNPFDLLDDDTEDLHKLVAAKPLKVEKPA-PVQPGKLPTKPLPPS 393
MA+VNPFDLLDDD ED ++VA+KPLKV P + GK+PTKP PPS
Sbjct: 1 MASVNPFDLLDDDAEDPSQIVASKPLKVVAPVQTAKSGKMPTKPPPPS 48
>gi|297804430|ref|XP_002870099.1| hypothetical protein ARALYDRAFT_493124
[Arabidopsis lyrata subsp. lyrata]
Length = 372
Score = 81 bits (198), Expect = 2e-013
Identities = 39/60 (65%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Frame = -1
Query: 177 MATVNPFDLLDDDTKDLHKLVAAKPLKVEKPA-PVQPGKLPTKPLPPSQAVREGKNGPGG 1
MA++NPFDLLDDD +D ++VAAKPLKV P P + GK+PTKP PP+QAVRE KN P G
Sbjct: 1 MASLNPFDLLDDDAEDPSQIVAAKPLKVAAPVQPAKSGKMPTKPPPPAQAVREAKNAPVG 60
Score = 65 bits (158), Expect = 7e-009
Identities = 31/48 (64%), Positives = 38/48 (79%), Gaps = 1/48 (2%)
Frame = -2
Query: 533 MATVNPFDLLDDDTEDLHKLVAAKPLKVEKPA-PVQPGKLPTKPLPPS 393
MA++NPFDLLDDD ED ++VAAKPLKV P P + GK+PTKP PP+
Sbjct: 1 MASLNPFDLLDDDAEDPSQIVAAKPLKVAAPVQPAKSGKMPTKPPPPA 48
>gi|195604856|gb|ACG24258.1| plasminogen activator inhibitor 1 RNA-binding
protein [Zea mays]
Length = 360
Score = 80 bits (195), Expect = 4e-013
Identities = 38/60 (63%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Frame = -1
Query: 177 MATVNPFDLLDDDTKDLHKLVAAKPLKVEKPA-PVQPGKLPTKPLPPSQAVREGKNGPGG 1
MA++NPFDLLDDD +D ++VA+KPLKV P + GK+PTKP PPSQAVRE +N PGG
Sbjct: 1 MASMNPFDLLDDDAEDPSQIVASKPLKVVAPVQTAKSGKMPTKPPPPSQAVREARNAPGG 60
Score = 62 bits (149), Expect = 8e-008
Identities = 30/48 (62%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Frame = -2
Query: 533 MATVNPFDLLDDDTEDLHKLVAAKPLKVEKPA-PVQPGKLPTKPLPPS 393
MA++NPFDLLDDD ED ++VA+KPLKV P + GK+PTKP PPS
Sbjct: 1 MASMNPFDLLDDDAEDPSQIVASKPLKVVAPVQTAKSGKMPTKPPPPS 48
>gi|89257422|gb|ABD64914.1| nuclear RNA binding protein, putative [Brassica
oleracea]
Length = 336
Score = 79 bits (194), Expect = 5e-013
Identities = 39/62 (62%), Positives = 46/62 (74%), Gaps = 3/62 (4%)
Frame = -1
Query: 177 MATVNPFDLLDDDTKDLHKLVAAKPLKVEKPAPVQP---GKLPTKPLPPSQAVREGKNGP 7
MA++NPFDLL DD +D ++V + P KVEK APVQP K PTKP PPSQAVRE +NGP
Sbjct: 1 MASLNPFDLLGDDAEDPSQIVLSLPKKVEKTAPVQPAKAAKFPTKPSPPSQAVRESRNGP 60
Query: 6 GG 1
G
Sbjct: 61 SG 62
Score = 62 bits (148), Expect = 1e-007
Identities = 31/50 (62%), Positives = 36/50 (72%), Gaps = 3/50 (6%)
Frame = -2
Query: 533 MATVNPFDLLDDDTEDLHKLVAAKPLKVEKPAPVQP---GKLPTKPLPPS 393
MA++NPFDLL DD ED ++V + P KVEK APVQP K PTKP PPS
Sbjct: 1 MASLNPFDLLGDDAEDPSQIVLSLPKKVEKTAPVQPAKAAKFPTKPSPPS 50
>gi|297790933|ref|XP_002863351.1| hypothetical protein ARALYDRAFT_494257
[Arabidopsis lyrata subsp. lyrata]
Length = 363
Score = 70 bits (169), Expect = 4e-010
Identities = 35/63 (55%), Positives = 42/63 (66%), Gaps = 4/63 (6%)
Frame = -1
Query: 177 MATVNPFDLLDDDTKDLHKLVAAKPLKVEKPA----PVQPGKLPTKPLPPSQAVREGKNG 10
MA++NPFDLL DD +D +L A KVEK A P + GK PTKP PPSQAV+E +N
Sbjct: 1 MASLNPFDLLGDDAEDPSQLAVALSQKVEKAAATVQPAKAGKFPTKPAPPSQAVKESRNA 60
Query: 9 PGG 1
P G
Sbjct: 61 PSG 63
>gi|89257548|gb|ABD65038.1| nuclear RNA binding protein, putative [Brassica
oleracea]
Length = 336
Score = 63 bits (152), Expect = 4e-008
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 3/60 (5%)
Frame = -1
Query: 177 MATVNPFDLLDDDTKDLHKLVAAKPLKVEKPAPVQP---GKLPTKPLPPSQAVREGKNGP 7
M+T+NPFDLL D +D ++V + P KVEK AP QP KL TK P SQAVRE +N P
Sbjct: 1 MSTLNPFDLLGGDAEDPSQIVVSLPKKVEKEAPAQPAKGAKLQTKQPPTSQAVRESRNAP 60
>gi|242057933|ref|XP_002458112.1| hypothetical protein SORBIDRAFT_03g027110
[Sorghum bicolor]
Length = 366
Score = 57 bits (135), Expect = 3e-006
Identities = 32/59 (54%), Positives = 36/59 (61%), Gaps = 4/59 (6%)
Frame = -1
Query: 177 MATVNPFDLL-DDDTKDLHKLVAAKPLKV---EKPAPVQPGKLPTKPLPPSQAVREGKN 13
M T N FDLL D D D L+AA K KPAP P KLPTKP PP+QAV+E +N
Sbjct: 1 MGTKNQFDLLVDVDNDDPSHLIAAAEKKAAASPKPAPAAPAKLPTKPTPPAQAVKESRN 59
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,486,029,363,122
Number of Sequences: 15229318
Number of Extensions: 1486029363122
Number of Successful Extensions: 394987781
Number of sequences better than 0.0: 0
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