BLASTX 7.6.2
Query= UN12295 /QuerySize=778
(777 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G17520.1 | Symbols: | nuclear RNA-binding pro... 81 7e-016
TAIR9_protein||AT5G47210.1 | Symbols: | nuclear RNA-binding pro... 67 1e-011
TAIR9_protein||AT5G47210.2 | Symbols: | nuclear RNA-binding pro... 67 1e-011
TAIR9_protein||AT5G47210.3 | Symbols: | nuclear RNA-binding pro... 67 1e-011
>TAIR9_protein||AT4G17520.1 | Symbols: | nuclear RNA-binding protein, putative
| chr4:9771496-9773313 FORWARD
Length = 361
Score = 81 bits (198), Expect = 7e-016
Identities = 39/60 (65%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Frame = -1
Query: 177 MATVNPFDLLDDDTKDLHKLVAAKPLKVEKPA-PVQPGKLPTKPLPPSQAVREGKNGPGG 1
MA+VNPFDLLDDD +D ++VA+KPLKV P + GK+PTKP PPSQAVRE +N PGG
Sbjct: 1 MASVNPFDLLDDDAEDPSQIVASKPLKVVAPVQTAKSGKMPTKPPPPSQAVREARNAPGG 60
Score = 63 bits (152), Expect = 2e-010
Identities = 31/48 (64%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Frame = -2
Query: 533 MATVNPFDLLDDDTEDLHKLVAAKPLKVEKPA-PVQPGKLPTKPLPPS 393
MA+VNPFDLLDDD ED ++VA+KPLKV P + GK+PTKP PPS
Sbjct: 1 MASVNPFDLLDDDAEDPSQIVASKPLKVVAPVQTAKSGKMPTKPPPPS 48
>TAIR9_protein||AT5G47210.1 | Symbols: | nuclear RNA-binding protein, putative
| chr5:19169222-19171012 REVERSE
Length = 358
Score = 67 bits (162), Expect = 1e-011
Identities = 35/63 (55%), Positives = 41/63 (65%), Gaps = 4/63 (6%)
Frame = -1
Query: 177 MATVNPFDLLDDDTKDLHKLVAAKPLKVEKPA----PVQPGKLPTKPLPPSQAVREGKNG 10
MA++NPFDLL DD +D +L A KVEK A P + K PTKP PPSQAVRE +N
Sbjct: 1 MASLNPFDLLGDDAEDPSQLAVALSQKVEKAAAAVQPPKAAKFPTKPAPPSQAVRESRNA 60
Query: 9 PGG 1
P G
Sbjct: 61 PQG 63
Score = 52 bits (124), Expect = 3e-007
Identities = 28/51 (54%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Frame = -2
Query: 533 MATVNPFDLLDDDTEDLHKLVAAKPLKVEKPA----PVQPGKLPTKPLPPS 393
MA++NPFDLL DD ED +L A KVEK A P + K PTKP PPS
Sbjct: 1 MASLNPFDLLGDDAEDPSQLAVALSQKVEKAAAAVQPPKAAKFPTKPAPPS 51
>TAIR9_protein||AT5G47210.2 | Symbols: | nuclear RNA-binding protein, putative
| chr5:19169155-19171012 REVERSE
Length = 306
Score = 67 bits (162), Expect = 1e-011
Identities = 35/63 (55%), Positives = 41/63 (65%), Gaps = 4/63 (6%)
Frame = -1
Query: 177 MATVNPFDLLDDDTKDLHKLVAAKPLKVEKPA----PVQPGKLPTKPLPPSQAVREGKNG 10
MA++NPFDLL DD +D +L A KVEK A P + K PTKP PPSQAVRE +N
Sbjct: 1 MASLNPFDLLGDDAEDPSQLAVALSQKVEKAAAAVQPPKAAKFPTKPAPPSQAVRESRNA 60
Query: 9 PGG 1
P G
Sbjct: 61 PQG 63
Score = 52 bits (124), Expect = 3e-007
Identities = 28/51 (54%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Frame = -2
Query: 533 MATVNPFDLLDDDTEDLHKLVAAKPLKVEKPA----PVQPGKLPTKPLPPS 393
MA++NPFDLL DD ED +L A KVEK A P + K PTKP PPS
Sbjct: 1 MASLNPFDLLGDDAEDPSQLAVALSQKVEKAAAAVQPPKAAKFPTKPAPPS 51
>TAIR9_protein||AT5G47210.3 | Symbols: | nuclear RNA-binding protein, putative
| chr5:19169388-19171012 REVERSE
Length = 302
Score = 67 bits (162), Expect = 1e-011
Identities = 35/63 (55%), Positives = 41/63 (65%), Gaps = 4/63 (6%)
Frame = -1
Query: 177 MATVNPFDLLDDDTKDLHKLVAAKPLKVEKPA----PVQPGKLPTKPLPPSQAVREGKNG 10
MA++NPFDLL DD +D +L A KVEK A P + K PTKP PPSQAVRE +N
Sbjct: 1 MASLNPFDLLGDDAEDPSQLAVALSQKVEKAAAAVQPPKAAKFPTKPAPPSQAVRESRNA 60
Query: 9 PGG 1
P G
Sbjct: 61 PQG 63
Score = 52 bits (124), Expect = 3e-007
Identities = 28/51 (54%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Frame = -2
Query: 533 MATVNPFDLLDDDTEDLHKLVAAKPLKVEKPA----PVQPGKLPTKPLPPS 393
MA++NPFDLL DD ED +L A KVEK A P + K PTKP PPS
Sbjct: 1 MASLNPFDLLGDDAEDPSQLAVALSQKVEKAAAAVQPPKAAKFPTKPAPPS 51
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,539,899,727
Number of Sequences: 33410
Number of Extensions: 6539899727
Number of Successful Extensions: 227121966
Number of sequences better than 0.0: 0
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