BLASTX 7.6.2
Query= UN12305 /QuerySize=1056
(1055 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G25910.1 | Symbols: | 3'-5' exonuclease domai... 329 2e-090
TAIR9_protein||AT2G25910.2 | Symbols: | 3'-5' exonuclease domai... 329 2e-090
TAIR9_protein||AT2G25920.1 | Symbols: | FUNCTIONS IN: molecular... 66 3e-011
>TAIR9_protein||AT2G25910.1 | Symbols: | 3'-5' exonuclease domain-containing
protein / K homology domain-containing protein / KH domain-containing
protein | chr2:11049379-11051997 REVERSE
Length = 342
Score = 329 bits (843), Expect = 2e-090
Identities = 156/175 (89%), Positives = 167/175 (95%)
Frame = +2
Query: 35 MASSSPTQRTHVPIPPEPGGRSLTQDADEPPVPIHIVTEPLQLPADFLNPSPENKLVVGF 214
MASSSPTQ HVPIPPEPGGRS TQ+A+EPPVPI+IVT+P QLPADFLNPSPE KLV+GF
Sbjct: 1 MASSSPTQLAHVPIPPEPGGRSPTQEANEPPVPIYIVTDPFQLPADFLNPSPEKKLVIGF 60
Query: 215 DCEGVDLCRHGKLCIMQIAFPNAIYLVDVIQGGDVLMRACKPALEFTYITKVIHDCKRDS 394
DCEGVDLCRHGKLCIMQIAF NAIYLVDVI+GG+V+M+ACKPALE YITKVIHDCKRDS
Sbjct: 61 DCEGVDLCRHGKLCIMQIAFSNAIYLVDVIEGGEVIMKACKPALESNYITKVIHDCKRDS 120
Query: 395 EALYFQFGIRLHNVVDTQIAFSLIEEQEGRRRPLDDYISFVSLLADPRYCGISYD 559
EALYFQFGIRLHNVVDTQIA+SLIEEQEGRRRPLDDYISFVSLLADPRYCGISY+
Sbjct: 121 EALYFQFGIRLHNVVDTQIAYSLIEEQEGRRRPLDDYISFVSLLADPRYCGISYE 175
Score = 200 bits (506), Expect = 2e-051
Identities = 94/115 (81%), Positives = 99/115 (86%)
Frame = +3
Query: 519 PSLLIHATAAYLMIRAAADDVRFLLYLYHKMMAKLSQRSLWHLAVRGSLYCRCFCCMNDT 698
P + LMIRAAADDVRFLLYLYHKMM KL+QRSLWHLAVRG+LYCRC CCMND
Sbjct: 188 PKFWTYRPMTELMIRAAADDVRFLLYLYHKMMGKLNQRSLWHLAVRGALYCRCLCCMNDA 247
Query: 699 DFANWPTVPPFPDNLKIGDQCPEEEILSVLDVPPGKMGRVIGRKGASILAIREAC 863
DFA+WPTVPP PDNLK DQC EEEILSVLDVPPGKMGRVIGRKGASILAI+EAC
Sbjct: 248 DFADWPTVPPIPDNLKSEDQCLEEEILSVLDVPPGKMGRVIGRKGASILAIKEAC 302
>TAIR9_protein||AT2G25910.2 | Symbols: | 3'-5' exonuclease domain-containing
protein / K homology domain-containing protein / KH domain-containing
protein | chr2:11049379-11051997 REVERSE
Length = 343
Score = 329 bits (843), Expect = 2e-090
Identities = 156/175 (89%), Positives = 167/175 (95%)
Frame = +2
Query: 35 MASSSPTQRTHVPIPPEPGGRSLTQDADEPPVPIHIVTEPLQLPADFLNPSPENKLVVGF 214
MASSSPTQ HVPIPPEPGGRS TQ+A+EPPVPI+IVT+P QLPADFLNPSPE KLV+GF
Sbjct: 1 MASSSPTQLAHVPIPPEPGGRSPTQEANEPPVPIYIVTDPFQLPADFLNPSPEKKLVIGF 60
Query: 215 DCEGVDLCRHGKLCIMQIAFPNAIYLVDVIQGGDVLMRACKPALEFTYITKVIHDCKRDS 394
DCEGVDLCRHGKLCIMQIAF NAIYLVDVI+GG+V+M+ACKPALE YITKVIHDCKRDS
Sbjct: 61 DCEGVDLCRHGKLCIMQIAFSNAIYLVDVIEGGEVIMKACKPALESNYITKVIHDCKRDS 120
Query: 395 EALYFQFGIRLHNVVDTQIAFSLIEEQEGRRRPLDDYISFVSLLADPRYCGISYD 559
EALYFQFGIRLHNVVDTQIA+SLIEEQEGRRRPLDDYISFVSLLADPRYCGISY+
Sbjct: 121 EALYFQFGIRLHNVVDTQIAYSLIEEQEGRRRPLDDYISFVSLLADPRYCGISYE 175
Score = 200 bits (506), Expect = 2e-051
Identities = 94/115 (81%), Positives = 99/115 (86%)
Frame = +3
Query: 519 PSLLIHATAAYLMIRAAADDVRFLLYLYHKMMAKLSQRSLWHLAVRGSLYCRCFCCMNDT 698
P + LMIRAAADDVRFLLYLYHKMM KL+QRSLWHLAVRG+LYCRC CCMND
Sbjct: 188 PKFWTYRPMTELMIRAAADDVRFLLYLYHKMMGKLNQRSLWHLAVRGALYCRCLCCMNDA 247
Query: 699 DFANWPTVPPFPDNLKIGDQCPEEEILSVLDVPPGKMGRVIGRKGASILAIREAC 863
DFA+WPTVPP PDNLK DQC EEEILSVLDVPPGKMGRVIGRKGASILAI+EAC
Sbjct: 248 DFADWPTVPPIPDNLKSEDQCLEEEILSVLDVPPGKMGRVIGRKGASILAIKEAC 302
>TAIR9_protein||AT2G25920.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: 3'-5' exonuclease domain-containing protein
/ K homology domain-containing protein / KH domain-containing protein
(TAIR:AT2G25910.2); Has 84 Blast hits to 79 proteins in 34 species:
Archae - 0; Bacteria - 23; Metazoa - 11; Fungi - 12; Plants - 23;
Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). |
chr2:11054425-11055916 REVERSE
Length = 281
Score = 66 bits (160), Expect = 3e-011
Identities = 29/36 (80%), Positives = 33/36 (91%)
Frame = +2
Query: 35 MASSSPTQRTHVPIPPEPGGRSLTQDADEPPVPIHI 142
M SSSPTQRTHV IPPEPGG+SLTQ+A+EPPVPI +
Sbjct: 1 MTSSSPTQRTHVSIPPEPGGKSLTQEANEPPVPISV 36
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,633,555,798
Number of Sequences: 33410
Number of Extensions: 6633555798
Number of Successful Extensions: 232491502
Number of sequences better than 0.0: 0
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