BLASTX 7.6.2

Query= UN12316 /QuerySize=964
        (963 letters)

Database: UniProt/SwissProt;
          518,415 sequences; 182,829,261 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

sp|Q9Z270|VAPA_RAT Vesicle-associated membrane protein-associate...     58   1e-007
sp|Q9WV55|VAPA_MOUSE Vesicle-associated membrane protein-associa...     57   1e-007
sp|Q0VCY1|VAPA_BOVIN Vesicle-associated membrane protein-associa...     57   2e-007
sp|Q9P0L0|VAPA_HUMAN Vesicle-associated membrane protein-associa...     57   2e-007
sp|Q5R601|VAPA_PONAB Vesicle-associated membrane protein-associa...     57   2e-007

>sp|Q9Z270|VAPA_RAT Vesicle-associated membrane protein-associated protein A
        OS=Rattus norvegicus GN=Vapa PE=1 SV=3

          Length = 249

 Score =  58 bits (138), Expect = 1e-007
 Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 6/136 (4%)
 Frame = +2

Query: 329 VSSVARSILPARRRLRLDPSSYLYFPYEAGKQVRSAIKLKNTSKSHTAFKFQTTAPKSCY 508
           ++S + ++    + L LDP S L F       V + +KL+N S     FK +TTAP+   
Sbjct:   1 MASASGAMAKHEQILVLDPPSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKTTAPRRYC 60

Query: 509 MRPPGGVLAPGESVFATVFKFVEHPENNEKHQLNQKSKAKFKIMSLKVKPGVDFVPELFD 688
           +RP  GV+ PG  V  +V            +  N+KSK KF + ++   P +  +  ++ 
Sbjct:  61 VRPNSGVIDPGSIVTVSVML------QPFDYDPNEKSKHKFMVQTIFAPPNISDMEAVWK 114

Query: 689 EQKDQVTVERVLRVIF 736
           E K    ++  LR +F
Sbjct: 115 EAKPDELMDSKLRCVF 130

>sp|Q9WV55|VAPA_MOUSE Vesicle-associated membrane protein-associated protein A
        OS=Mus musculus GN=Vapa PE=1 SV=2

          Length = 249

 Score =  57 bits (137), Expect = 1e-007
 Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 6/136 (4%)
 Frame = +2

Query: 329 VSSVARSILPARRRLRLDPSSYLYFPYEAGKQVRSAIKLKNTSKSHTAFKFQTTAPKSCY 508
           ++S + ++    + L LDP S L F       V + +KL+N S     FK +TTAP+   
Sbjct:   1 MASASGAMAKHEQILVLDPPSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKTTAPRRYC 60

Query: 509 MRPPGGVLAPGESVFATVFKFVEHPENNEKHQLNQKSKAKFKIMSLKVKPGVDFVPELFD 688
           +RP  G++ PG  V  +V            +  N+KSK KF + ++   P +  +  ++ 
Sbjct:  61 VRPNSGIIDPGSIVTVSVML------QPFDYDPNEKSKHKFMVQTIFAPPNISDMEAVWK 114

Query: 689 EQKDQVTVERVLRVIF 736
           E K    ++  LR +F
Sbjct: 115 EAKPDELMDSKLRCVF 130

>sp|Q0VCY1|VAPA_BOVIN Vesicle-associated membrane protein-associated protein A
        OS=Bos taurus GN=VAPA PE=2 SV=1

          Length = 249

 Score =  57 bits (135), Expect = 2e-007
 Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 6/136 (4%)
 Frame = +2

Query: 329 VSSVARSILPARRRLRLDPSSYLYFPYEAGKQVRSAIKLKNTSKSHTAFKFQTTAPKSCY 508
           ++S + ++    + L LDP + L F       V + +KL+N S     FK +TTAP+   
Sbjct:   1 MASASGTMAKHEQILVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYC 60

Query: 509 MRPPGGVLAPGESVFATVFKFVEHPENNEKHQLNQKSKAKFKIMSLKVKPGVDFVPELFD 688
           +RP  G++ PG +V  +V            +  N+KSK KF + ++   P +  +  ++ 
Sbjct:  61 VRPNSGIIDPGLTVTVSVML------QPFDYDPNEKSKHKFMVQTIFAPPNISDMEAVWK 114

Query: 689 EQKDQVTVERVLRVIF 736
           E K    ++  LR +F
Sbjct: 115 EAKPDELMDSKLRCVF 130

>sp|Q9P0L0|VAPA_HUMAN Vesicle-associated membrane protein-associated protein A
        OS=Homo sapiens GN=VAPA PE=1 SV=3

          Length = 249

 Score =  57 bits (135), Expect = 2e-007
 Identities = 37/136 (27%), Positives = 65/136 (47%), Gaps = 6/136 (4%)
 Frame = +2

Query: 329 VSSVARSILPARRRLRLDPSSYLYFPYEAGKQVRSAIKLKNTSKSHTAFKFQTTAPKSCY 508
           ++S + ++    + L LDP + L F       V + +KL+N S     FK +TTAP+   
Sbjct:   1 MASASGAMAKHEQILVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYC 60

Query: 509 MRPPGGVLAPGESVFATVFKFVEHPENNEKHQLNQKSKAKFKIMSLKVKPGVDFVPELFD 688
           +RP  G++ PG +V  +V            +  N+KSK KF + ++   P    +  ++ 
Sbjct:  61 VRPNSGIIDPGSTVTVSVML------QPFDYDPNEKSKHKFMVQTIFAPPNTSDMEAVWK 114

Query: 689 EQKDQVTVERVLRVIF 736
           E K    ++  LR +F
Sbjct: 115 EAKPDELMDSKLRCVF 130

>sp|Q5R601|VAPA_PONAB Vesicle-associated membrane protein-associated protein A
        OS=Pongo abelii GN=VAPA PE=2 SV=2

          Length = 249

 Score =  57 bits (135), Expect = 2e-007
 Identities = 37/136 (27%), Positives = 65/136 (47%), Gaps = 6/136 (4%)
 Frame = +2

Query: 329 VSSVARSILPARRRLRLDPSSYLYFPYEAGKQVRSAIKLKNTSKSHTAFKFQTTAPKSCY 508
           ++S + ++    + L LDP + L F       V + +KL+N S     FK +TTAP+   
Sbjct:   1 MASASGAMAKHEQILVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYC 60

Query: 509 MRPPGGVLAPGESVFATVFKFVEHPENNEKHQLNQKSKAKFKIMSLKVKPGVDFVPELFD 688
           +RP  G++ PG +V  +V            +  N+KSK KF + ++   P    +  ++ 
Sbjct:  61 VRPNSGIIDPGSTVTVSVML------QPFDYDPNEKSKHKFMVQTIFAPPNTSDMEAVWK 114

Query: 689 EQKDQVTVERVLRVIF 736
           E K    ++  LR +F
Sbjct: 115 EAKPDELMDSKLRCVF 130

  Database: UniProt/SwissProt
    Posted date:  Sat Aug 07 14:36:18 2010
  Number of letters in database: 182,829,261
  Number of sequences in database:  518,415

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,796,540,212
Number of Sequences: 518415
Number of Extensions: 51796540212
Number of Successful Extensions: 358348623
Number of sequences better than 0.0: 0